Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400075360
CDS Infomation

pacid=37445937 polypeptide=PGSC0003DMP400051034 locus=PGSC0003DMG400029309 ID=PGSC0003DMT400075360.v4.03 annot-version=v4.03
Sequence

ATGGATGCAGATTACGGCATAGCTAGAGAACTCTCTGATCTGCAAAAGCTTCGATCTCAG
TATCAACCTGAACTTCCTCCTTGTCTTCAGGGTACTACTGTGCGGGTTGAGCTAGGTGAT
GCAACCACTGCAGCAGATCACTCTGGTGAACATGTAATAAGTCGGTCTTTTCCTCACACT
TATGGTCAGCCATTGGCCCATTTTCTCAGGGCAACTGCCAAAGTCTCTGATGCTCAGATA
ATTACCGAGCATCCAGCGAAGAGGGTTGGAATTGTTTTCTGCGGGAGACAATCTCCTGGT
GGACATAATGTGATATGGGGTATTCATGATGCCCTTAAAATTCACAATCCTAACAGTACT
TTGCTTGGTTTTCTGGGTGGTTCTGAAGGTTTATTTGCACAGAAAACCCTAGAGATCACC
AATGATATTCTTGCCACCTATAAGAATCAAGGTGGTTATGACATGCTGGGTCGGACAAAA
GATCAAATTAGAACAACCGAGCAAGTTAATGCCGCAATGGCTGCATGCAAAGCTTTGAAA
TTGGATGCCCTTATCATTATTGGAGGGGTAACATCAAACACTGATGCTGCTCAACTGGCC
GAAACATTTGCCGAAGCAAAATGCCAAACAAAAGTGGTTGGAGTTCCTGTTACATTAAAT
GGAGATCTAAAGAATCAGTTTGTTGAAACAAACGTCGGTTTTGACACAATATGCAAGGTT
AATTCCCAACTCATTAGCAATATGTGCACTGATGCGCTCTCGGCAGAAAAGTACTACTAT
TTCATCCGACTCATGGGGCGAAAGGCATCACATGTTGCCTTAGAATGCACTCTGCAGTCA
CATCCTAATATGGTAATTCTTGGTGAGGAGGTAGCTGCATCAAAGCTTACACTTTTTGAC
ATCACAAACAAAATTTGTGATACAGTTCAAGCTAGGGCTGAACAAGATAAAAACCATGGT
GTGATCCTGTTGCCAGAGGGGCTTATTGAAAGTATTCCTGAAGTATATGCTCTACTGCAG
GAAATTCATGGTTTGCTCACACAAGGCGTTTCTACTGATAAGATTTCCTCTCAACTATCA
CCTTGGGCATCTGCACTCTTTGAGTTCTTGCCGCCCTTTATAAAAAAGCAGCTCCTCTTG
CACCCAGAATCAGATGATTCTGCTCAGCTATCACAGATTGAAACCGAGAAACTTATAGCT
CATCTGGTGGAAACAGAAATGAATAAGCGATTGAAAGAAGGAACTTACAAGGGAAAGAAA
TTTAATGCAATTTGCCATTTCTTTGGTTATCAAGCTCGGGGATCATTGCCATCAAAGTTT
GATTGTGACTATGCATATGTACTTGGTCACGTCTGCTATCATATATTGGCTGCTGGCCTC
AATGGTTACATGGCTACATTGACTAACTTGAAGAATCCTGTCAACAAGTGGCGCTGTGGG
GCTGCTCCTATAACTGCTATGATGAGTGTGAAGCGGTATGGTCGTGGTCCTGGCAAGGCA
TCACTTGGGAAGCCTGCTGTGCATCCAGCCACTGTAGATTTGAAGGGCAAATCATACGAA
TTATTGAGTCAAAATGCGACAAAGTTCTTGCTCGATGATGTTTACAGAAACCCAGGCCCC
CTCCAGTTTGATGGCCCTGGTGCTGACGCAAAGGCTATTACTCTTTGCGTTGAAGACCAG
GATTACATGGGTCGTATCAAGAAATTGCAAGAGTATCTGGACAAGGTTCGTACAATCGTG
AAGCCTGGATGCTCACAAGATGTCCTGAAAGCTGCACTTAGTGCCATGTCTTCTGTCACA
GAAATTCTTTCTGTGATGACCTCTCCTTCAAGCAACGTGAACACACCATTCTAG

Peptide Sequence

PEP ID

PGSC0003DMP400051034
PEP Infomation

pacid=37445937 transcript=PGSC0003DMT400075360 locus=PGSC0003DMG400029309 ID=PGSC0003DMT400075360.v4.03 annot-version=v4.03
Sequence

MDADYGIARELSDLQKLRSQYQPELPPCLQGTTVRVELGDATTAADHSGEHVISRSFPHT
YGQPLAHFLRATAKVSDAQIITEHPAKRVGIVFCGRQSPGGHNVIWGIHDALKIHNPNST
LLGFLGGSEGLFAQKTLEITNDILATYKNQGGYDMLGRTKDQIRTTEQVNAAMAACKALK
LDALIIIGGVTSNTDAAQLAETFAEAKCQTKVVGVPVTLNGDLKNQFVETNVGFDTICKV
NSQLISNMCTDALSAEKYYYFIRLMGRKASHVALECTLQSHPNMVILGEEVAASKLTLFD
ITNKICDTVQARAEQDKNHGVILLPEGLIESIPEVYALLQEIHGLLTQGVSTDKISSQLS
PWASALFEFLPPFIKKQLLLHPESDDSAQLSQIETEKLIAHLVETEMNKRLKEGTYKGKK
FNAICHFFGYQARGSLPSKFDCDYAYVLGHVCYHILAAGLNGYMATLTNLKNPVNKWRCG
AAPITAMMSVKRYGRGPGKASLGKPAVHPATVDLKGKSYELLSQNATKFLLDDVYRNPGP
LQFDGPGADAKAITLCVEDQDYMGRIKKLQEYLDKVRTIVKPGCSQDVLKAALSAMSSVT
EILSVMTSPSSNVNTPF*

Transcript Sequence

Transcript ID

PGSC0003DMT400075360
Transcript Infomation

pacid=37445937 locus=PGSC0003DMG400029309 ID=PGSC0003DMT400075360.v4.03 annot-version=v4.03
Sequence

ATGGATGCAGATTACGGCATAGCTAGAGAACTCTCTGATCTGCAAAAGCTTCGATCTCAG
TATCAACCTGAACTTCCTCCTTGTCTTCAGGGTACTACTGTGCGGGTTGAGCTAGGTGAT
GCAACCACTGCAGCAGATCACTCTGGTGAACATGTAATAAGTCGGTCTTTTCCTCACACT
TATGGTCAGCCATTGGCCCATTTTCTCAGGGCAACTGCCAAAGTCTCTGATGCTCAGATA
ATTACCGAGCATCCAGCGAAGAGGGTTGGAATTGTTTTCTGCGGGAGACAATCTCCTGGT
GGACATAATGTGATATGGGGTATTCATGATGCCCTTAAAATTCACAATCCTAACAGTACT
TTGCTTGGTTTTCTGGGTGGTTCTGAAGGTTTATTTGCACAGAAAACCCTAGAGATCACC
AATGATATTCTTGCCACCTATAAGAATCAAGGTGGTTATGACATGCTGGGTCGGACAAAA
GATCAAATTAGAACAACCGAGCAAGTTAATGCCGCAATGGCTGCATGCAAAGCTTTGAAA
TTGGATGCCCTTATCATTATTGGAGGGGTAACATCAAACACTGATGCTGCTCAACTGGCC
GAAACATTTGCCGAAGCAAAATGCCAAACAAAAGTGGTTGGAGTTCCTGTTACATTAAAT
GGAGATCTAAAGAATCAGTTTGTTGAAACAAACGTCGGTTTTGACACAATATGCAAGGTT
AATTCCCAACTCATTAGCAATATGTGCACTGATGCGCTCTCGGCAGAAAAGTACTACTAT
TTCATCCGACTCATGGGGCGAAAGGCATCACATGTTGCCTTAGAATGCACTCTGCAGTCA
CATCCTAATATGGTAATTCTTGGTGAGGAGGTAGCTGCATCAAAGCTTACACTTTTTGAC
ATCACAAACAAAATTTGTGATACAGTTCAAGCTAGGGCTGAACAAGATAAAAACCATGGT
GTGATCCTGTTGCCAGAGGGGCTTATTGAAAGTATTCCTGAAGTATATGCTCTACTGCAG
GAAATTCATGGTTTGCTCACACAAGGCGTTTCTACTGATAAGATTTCCTCTCAACTATCA
CCTTGGGCATCTGCACTCTTTGAGTTCTTGCCGCCCTTTATAAAAAAGCAGCTCCTCTTG
CACCCAGAATCAGATGATTCTGCTCAGCTATCACAGATTGAAACCGAGAAACTTATAGCT
CATCTGGTGGAAACAGAAATGAATAAGCGATTGAAAGAAGGAACTTACAAGGGAAAGAAA
TTTAATGCAATTTGCCATTTCTTTGGTTATCAAGCTCGGGGATCATTGCCATCAAAGTTT
GATTGTGACTATGCATATGTACTTGGTCACGTCTGCTATCATATATTGGCTGCTGGCCTC
AATGGTTACATGGCTACATTGACTAACTTGAAGAATCCTGTCAACAAGTGGCGCTGTGGG
GCTGCTCCTATAACTGCTATGATGAGTGTGAAGCGGTATGGTCGTGGTCCTGGCAAGGCA
TCACTTGGGAAGCCTGCTGTGCATCCAGCCACTGTAGATTTGAAGGGCAAATCATACGAA
TTATTGAGTCAAAATGCGACAAAGTTCTTGCTCGATGATGTTTACAGAAACCCAGGCCCC
CTCCAGTTTGATGGCCCTGGTGCTGACGCAAAGGCTATTACTCTTTGCGTTGAAGACCAG
GATTACATGGGTCGTATCAAGAAATTGCAAGAGTATCTGGACAAGGTTCGTACAATCGTG
AAGCCTGGATGCTCACAAGATGTCCTGAAAGCTGCACTTAGTGCCATGTCTTCTGTCACA
GAAATTCTTTCTGTGATGACCTCTCCTTCAAGCAACGTGAACACACCATTCTAG