Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400075335
CDS Infomation

pacid=37445929 polypeptide=PGSC0003DMP400051013 locus=PGSC0003DMG400029298 ID=PGSC0003DMT400075335.v4.03 annot-version=v4.03
Sequence

ATGGGTTCCCAAAATCCGGGGGAAGATTCTATTGTTGTTGCCGTTGATAAAGATAAGAGT
AGCAGCTCTGCGGTGAAATGGGCTATTGATAATCTGCTTGGAAACAATCAAAGTCTTGTA
TTGGTTCATGTTCGGGTCAAGAATTCACCAAAGCCTACTTTAGATTCAAATGGAGGATTA
AGTGATGAAGGTACTCAAAATGTCTTCATACCTTTCAAGGCTTATTCTGCACGCAAAAGG
ATAGTAGTGAAAGAGATTGTCATTGAGAATACTGAAGCATCGAAGGGACTTCTTGAGTAC
ATCAACAGTCACAGTGTTAGCAACATTGTTCTTGGTGCATCGTCTAGGAGTACTCTTGGC
AGAAAATATTGGACTCATGATGTGCCAACATTGGTAAATAAGGCTGCACCAGAGTTTTGT
TCTGTCTACGTAGTTTCAAAAGGCAAGCAACAATCTGTCCGACCAGCAGCAAAATCTCTT
CCTTCTTCTGTACCAGCAAGACAACCATCTTCATCAGCATGGTCAGCACCTAGGTCAAGT
AACTCTGGATCAGAAGATTCAACCAGGTTTTCATACATGAGGTCAGAGCAAAAAATTGTA
GAATCTGAGAAGACGAGGGGTGAAAAAGGACCATCTATTGTACCGATAGATAATCTTCAT
TCTCCCGAGATGACAAATCCATATAAGCACGCTTCTCAACCAGATGGTAATATGCGGTAT
GCTCGTATTAGCCCTAGATCAGTTGATATGACGTCCGAAAATCTTGACTTCACACAAGTT
GCCATCAGAGAAACTCCTATGAATGGAAGCTCCTCATATTCAGTGGATGCTGAGATGAAA
AGACTAAAACTTGAGCTAAGGCAAACTATGGATATGTACAATGCAGCTTGCAAAGAAGCG
GTCATGGCCAACCAAGCGGCTGATGAGCTTAATAAATGGAAAATTGAAGAAGCTCGCAAG
TTTGAACAAGCCCGTTTTGCTGAAGAGGCGGCTCTCGCAATTGCTGAGACTGAAAAGGCT
AAATGCAGAGCTGCTATTGAAGCTGCTAAGAAAGCACAAAAGATGGCTGAAATAGAAGCA
CAAAGAAGGAAGTATGCAGAGTTAAAAGCTAAGCGAGAGACAGAAAAAAAGAAACAAGCA
ATGAATGTTCGATCTCAGAATGATATACGTTATAGGAAGTATACAATAGAAGAGATTGAG
GCAGCCACCAAAAAGTTCTCAAATGCACAAAAAATTGGAGAAGGTGGATATGGACCTGTT
TTTAAGGGTAAACTAGATCACACACCTGTTGCCATTAAAGTTCTGAGTCCTGATGCTGCA
CAAGGGAAGAAACAGTTCCAACAAGAGGTTGAGGTCCTCAGTCTCATTAGGCATCCAAAT
CTGGTGCTACTATTAGGTGCATGTCCTGAGTATGGGTGCTTAGTTTATGAGCTTATGAAT
AATGGCAGCTTGGAAGATCGTCTTTTTCGGAAAGGTAATACCCCTTCAATTCCATGGGAA
ATTCGCTTCAAAATTGCTGCTGAGATTGCAACCGGGCTTCTATTCCTTCATCAATCAAAA
CCAGAACCTCTTGTTCACCGGGATCTAAAGCCAGGAAATATTCTGTTGGACAAAAATTAT
GTCTGCAAAATCAGTGATGTTGGTTTGGCAAGGTTAGTGCCATCATCTGTAGCTGATTGT
GTGACACAATATCATATGACTTCAGCTGCCGGGACTTTTTGTTATATAGATCCTGAATAT
CAACAAACGGGAAGGTTAGAGACTAAATCAGATATATACTCGCTTGGTGTTATGTTGCTC
CAAATTATTACTGCAAGGCCTCCAATGGGTTTAACTCATCACGTTGAAAGGGCCATCGAG
AAAGGTAAATTTGCAGATTTTTTAGATCCAACAGTGCCAAATTGGCCAGTGGAAGAGGCT
CTTAAGTTTGCAAAATTGTCACTCAAGTGTGCTGAGCTGAGGAAGAAAGACAGACCTGAT
CTTGGTTCAGTAGTAGTTCCTGAGCTTACTAGGCTTAGTGAATTCGGAATGAGCAGCATG
CCAGGTATCGGTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400051013
PEP Infomation

pacid=37445929 transcript=PGSC0003DMT400075335 locus=PGSC0003DMG400029298 ID=PGSC0003DMT400075335.v4.03 annot-version=v4.03
Sequence

MGSQNPGEDSIVVAVDKDKSSSSAVKWAIDNLLGNNQSLVLVHVRVKNSPKPTLDSNGGL
SDEGTQNVFIPFKAYSARKRIVVKEIVIENTEASKGLLEYINSHSVSNIVLGASSRSTLG
RKYWTHDVPTLVNKAAPEFCSVYVVSKGKQQSVRPAAKSLPSSVPARQPSSSAWSAPRSS
NSGSEDSTRFSYMRSEQKIVESEKTRGEKGPSIVPIDNLHSPEMTNPYKHASQPDGNMRY
ARISPRSVDMTSENLDFTQVAIRETPMNGSSSYSVDAEMKRLKLELRQTMDMYNAACKEA
VMANQAADELNKWKIEEARKFEQARFAEEAALAIAETEKAKCRAAIEAAKKAQKMAEIEA
QRRKYAELKAKRETEKKKQAMNVRSQNDIRYRKYTIEEIEAATKKFSNAQKIGEGGYGPV
FKGKLDHTPVAIKVLSPDAAQGKKQFQQEVEVLSLIRHPNLVLLLGACPEYGCLVYELMN
NGSLEDRLFRKGNTPSIPWEIRFKIAAEIATGLLFLHQSKPEPLVHRDLKPGNILLDKNY
VCKISDVGLARLVPSSVADCVTQYHMTSAAGTFCYIDPEYQQTGRLETKSDIYSLGVMLL
QIITARPPMGLTHHVERAIEKGKFADFLDPTVPNWPVEEALKFAKLSLKCAELRKKDRPD
LGSVVVPELTRLSEFGMSSMPGIG*

Transcript Sequence

Transcript ID

PGSC0003DMT400075335
Transcript Infomation

pacid=37445929 locus=PGSC0003DMG400029298 ID=PGSC0003DMT400075335.v4.03 annot-version=v4.03
Sequence

ATGGGTTCCCAAAATCCGGGGGAAGATTCTATTGTTGTTGCCGTTGATAAAGATAAGAGT
AGCAGCTCTGCGGTGAAATGGGCTATTGATAATCTGCTTGGAAACAATCAAAGTCTTGTA
TTGGTTCATGTTCGGGTCAAGAATTCACCAAAGCCTACTTTAGATTCAAATGGAGGATTA
AGTGATGAAGGTACTCAAAATGTCTTCATACCTTTCAAGGCTTATTCTGCACGCAAAAGG
ATAGTAGTGAAAGAGATTGTCATTGAGAATACTGAAGCATCGAAGGGACTTCTTGAGTAC
ATCAACAGTCACAGTGTTAGCAACATTGTTCTTGGTGCATCGTCTAGGAGTACTCTTGGC
AGAAAATATTGGACTCATGATGTGCCAACATTGGTAAATAAGGCTGCACCAGAGTTTTGT
TCTGTCTACGTAGTTTCAAAAGGCAAGCAACAATCTGTCCGACCAGCAGCAAAATCTCTT
CCTTCTTCTGTACCAGCAAGACAACCATCTTCATCAGCATGGTCAGCACCTAGGTCAAGT
AACTCTGGATCAGAAGATTCAACCAGGTTTTCATACATGAGGTCAGAGCAAAAAATTGTA
GAATCTGAGAAGACGAGGGGTGAAAAAGGACCATCTATTGTACCGATAGATAATCTTCAT
TCTCCCGAGATGACAAATCCATATAAGCACGCTTCTCAACCAGATGGTAATATGCGGTAT
GCTCGTATTAGCCCTAGATCAGTTGATATGACGTCCGAAAATCTTGACTTCACACAAGTT
GCCATCAGAGAAACTCCTATGAATGGAAGCTCCTCATATTCAGTGGATGCTGAGATGAAA
AGACTAAAACTTGAGCTAAGGCAAACTATGGATATGTACAATGCAGCTTGCAAAGAAGCG
GTCATGGCCAACCAAGCGGCTGATGAGCTTAATAAATGGAAAATTGAAGAAGCTCGCAAG
TTTGAACAAGCCCGTTTTGCTGAAGAGGCGGCTCTCGCAATTGCTGAGACTGAAAAGGCT
AAATGCAGAGCTGCTATTGAAGCTGCTAAGAAAGCACAAAAGATGGCTGAAATAGAAGCA
CAAAGAAGGAAGTATGCAGAGTTAAAAGCTAAGCGAGAGACAGAAAAAAAGAAACAAGCA
ATGAATGTTCGATCTCAGAATGATATACGTTATAGGAAGTATACAATAGAAGAGATTGAG
GCAGCCACCAAAAAGTTCTCAAATGCACAAAAAATTGGAGAAGGTGGATATGGACCTGTT
TTTAAGGGTAAACTAGATCACACACCTGTTGCCATTAAAGTTCTGAGTCCTGATGCTGCA
CAAGGGAAGAAACAGTTCCAACAAGAGGTTGAGGTCCTCAGTCTCATTAGGCATCCAAAT
CTGGTGCTACTATTAGGTGCATGTCCTGAGTATGGGTGCTTAGTTTATGAGCTTATGAAT
AATGGCAGCTTGGAAGATCGTCTTTTTCGGAAAGGTAATACCCCTTCAATTCCATGGGAA
ATTCGCTTCAAAATTGCTGCTGAGATTGCAACCGGGCTTCTATTCCTTCATCAATCAAAA
CCAGAACCTCTTGTTCACCGGGATCTAAAGCCAGGAAATATTCTGTTGGACAAAAATTAT
GTCTGCAAAATCAGTGATGTTGGTTTGGCAAGGTTAGTGCCATCATCTGTAGCTGATTGT
GTGACACAATATCATATGACTTCAGCTGCCGGGACTTTTTGTTATATAGATCCTGAATAT
CAACAAACGGGAAGGTTAGAGACTAAATCAGATATATACTCGCTTGGTGTTATGTTGCTC
CAAATTATTACTGCAAGGCCTCCAATGGGTTTAACTCATCACGTTGAAAGGGCCATCGAG
AAAGGTAAATTTGCAGATTTTTTAGATCCAACAGTGCCAAATTGGCCAGTGGAAGAGGCT
CTTAAGTTTGCAAAATTGTCACTCAAGTGTGCTGAGCTGAGGAAGAAAGACAGACCTGAT
CTTGGTTCAGTAGTAGTTCCTGAGCTTACTAGGCTTAGTGAATTCGGAATGAGCAGCATG
CCAGGTATCGGTTAG