Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400075333
CDS Infomation

pacid=37447019 polypeptide=PGSC0003DMP400051011 locus=PGSC0003DMG400029297 ID=PGSC0003DMT400075333.v4.03 annot-version=v4.03
Sequence

ATGGAGGAGATGTATATGGTTGCAGTGCCATTTGTATTTGGTAGTTTGATCTGTCACAAA
CCAAGCATAGGAAGTCATATGGATGTAACTAAGATAAATTCGATGGATGATGCAACGAGC
TTGTATTCTAATTCTGGGACTAAAATGCTGGCAGACACTGTTTCTGGTGGCAATGATGAT
TGTAGTTCTGCTGATTCGGAGAGCGACCTTAGTATTACGGCATCATCTGTGCCTGAAGAG
AGCAGAAGTGAAGGGACTATGTCGCTTGATGTGATATCTGAAAATGAAAGCAACTGGATT
GGTGGTGATGCTGTTGTTAGGGAAAGTGAGGATGATGATTCCTTATCACTGGAGGGTGAT
CAGATTCCCGATAATTCGTGTTCCCTGTCAGTGGTGAGCGATTGTAGTAGTTTATGCGCT
GATGATTTTATAGGCTTTGAGATAGCGTCTGACATAGAAAGTCAGGATTTCGTGGATTCT
CAGAAAAGCATCAGCCACGACGAACTTATTGGTAAGACTGGGGTTTTGGTTGAGTCAGAT
GTTGAGGATACTTTGACTAGACCCGTGGCAGTTCCGGTCAGACTTGAGGAGCAGATCACT
GATAAAGGTTTGAATGCAACAGTCAGCCGCAGTGTTTTTGAAGTGGACTACATACCCCTA
TGGGGATATACATCTATCTGTGGAAGGAGACCAGAAATGGAAGACGCATTCGCAACTGTT
CCTAGATTCATGAAAATTCCTCTACAGATGTTAATTGGTGATCGCGTGCTTGATGGACTG
TCTAGACGCTTGAGTCATTTGACGACTCATTTCTTTGGAGTATATGATGGCCATGGTGGT
TCTCAGGTGGCAAATTACTGCCGAGACCGGATTCATGCTGTATTGGCTGAGGAGTTGGAA
ACTTTTATGATGAATCTCAGTGATGAAAGTATTAAACAAAGTTGCCAAGAGCTCTGGAAT
AGAGCCTTTACCAACTGTTTTCTTAAAGTTGATGCTGAGATTGGAGGGGGAGCTGGTCAC
GAGCCTGTTGCTCCAGAAACTGTAGGCTCCACAGCTGTTGTTGCTGTTGTTTGTTCATCT
CATATTATAGTGGCAAACTGTGGTGATTCAAGGGCTGTTCTGTGTCGTGGGAAGGAACCC
ATGGCATTGTCAGTGGATCACAAACCAAACCGAGAAGATGAATATAAAAGGATTGAAGCA
GCTGGAGGGAAGGTGATACAGTGGAATGGCCATCGTGTTTTCGGTGTTCTTGCAATGTCT
AGGTCTATCGGAGATAAATACTTGAAGCCTTGGATAATTCCTGATCCAGAAGTAACGTTC
ATACCTCGAACCAAGGATGATGATTGCCTTATTCTTGCGAGTGATGGTTTATGGGATGTC
ATGACAAATGAAGAAGCTTGTGATATGGCTCGTAAACGTATACTCATGTGGCATAAAAAG
TACGGTGCAACGCTCCCCGTGGAAAGAGGTGAAGGAATTGATCCAGCGTCACAGGCAGCA
GCAGAATGCTTGTCGAATCGAGCTCTTCAGAAGGGCAGCAAGGACAACATAACAGTGATT
GTGGTGGACTTGAAAGCTCAAAGAAAATTCAAAACCAAAACTTCAACATAA

Peptide Sequence

PEP ID

PGSC0003DMP400051011
PEP Infomation

pacid=37447019 transcript=PGSC0003DMT400075333 locus=PGSC0003DMG400029297 ID=PGSC0003DMT400075333.v4.03 annot-version=v4.03
Sequence

MEEMYMVAVPFVFGSLICHKPSIGSHMDVTKINSMDDATSLYSNSGTKMLADTVSGGNDD
CSSADSESDLSITASSVPEESRSEGTMSLDVISENESNWIGGDAVVRESEDDDSLSLEGD
QIPDNSCSLSVVSDCSSLCADDFIGFEIASDIESQDFVDSQKSISHDELIGKTGVLVESD
VEDTLTRPVAVPVRLEEQITDKGLNATVSRSVFEVDYIPLWGYTSICGRRPEMEDAFATV
PRFMKIPLQMLIGDRVLDGLSRRLSHLTTHFFGVYDGHGGSQVANYCRDRIHAVLAEELE
TFMMNLSDESIKQSCQELWNRAFTNCFLKVDAEIGGGAGHEPVAPETVGSTAVVAVVCSS
HIIVANCGDSRAVLCRGKEPMALSVDHKPNREDEYKRIEAAGGKVIQWNGHRVFGVLAMS
RSIGDKYLKPWIIPDPEVTFIPRTKDDDCLILASDGLWDVMTNEEACDMARKRILMWHKK
YGATLPVERGEGIDPASQAAAECLSNRALQKGSKDNITVIVVDLKAQRKFKTKTST*

Transcript Sequence

Transcript ID

PGSC0003DMT400075333
Transcript Infomation

pacid=37447019 locus=PGSC0003DMG400029297 ID=PGSC0003DMT400075333.v4.03 annot-version=v4.03
Sequence

ATGGAGGAGATGTATATGGTTGCAGTGCCATTTGTATTTGGTAGTTTGATCTGTCACAAA
CCAAGCATAGGAAGTCATATGGATGTAACTAAGATAAATTCGATGGATGATGCAACGAGC
TTGTATTCTAATTCTGGGACTAAAATGCTGGCAGACACTGTTTCTGGTGGCAATGATGAT
TGTAGTTCTGCTGATTCGGAGAGCGACCTTAGTATTACGGCATCATCTGTGCCTGAAGAG
AGCAGAAGTGAAGGGACTATGTCGCTTGATGTGATATCTGAAAATGAAAGCAACTGGATT
GGTGGTGATGCTGTTGTTAGGGAAAGTGAGGATGATGATTCCTTATCACTGGAGGGTGAT
CAGATTCCCGATAATTCGTGTTCCCTGTCAGTGGTGAGCGATTGTAGTAGTTTATGCGCT
GATGATTTTATAGGCTTTGAGATAGCGTCTGACATAGAAAGTCAGGATTTCGTGGATTCT
CAGAAAAGCATCAGCCACGACGAACTTATTGGTAAGACTGGGGTTTTGGTTGAGTCAGAT
GTTGAGGATACTTTGACTAGACCCGTGGCAGTTCCGGTCAGACTTGAGGAGCAGATCACT
GATAAAGGTTTGAATGCAACAGTCAGCCGCAGTGTTTTTGAAGTGGACTACATACCCCTA
TGGGGATATACATCTATCTGTGGAAGGAGACCAGAAATGGAAGACGCATTCGCAACTGTT
CCTAGATTCATGAAAATTCCTCTACAGATGTTAATTGGTGATCGCGTGCTTGATGGACTG
TCTAGACGCTTGAGTCATTTGACGACTCATTTCTTTGGAGTATATGATGGCCATGGTGGT
TCTCAGGTGGCAAATTACTGCCGAGACCGGATTCATGCTGTATTGGCTGAGGAGTTGGAA
ACTTTTATGATGAATCTCAGTGATGAAAGTATTAAACAAAGTTGCCAAGAGCTCTGGAAT
AGAGCCTTTACCAACTGTTTTCTTAAAGTTGATGCTGAGATTGGAGGGGGAGCTGGTCAC
GAGCCTGTTGCTCCAGAAACTGTAGGCTCCACAGCTGTTGTTGCTGTTGTTTGTTCATCT
CATATTATAGTGGCAAACTGTGGTGATTCAAGGGCTGTTCTGTGTCGTGGGAAGGAACCC
ATGGCATTGTCAGTGGATCACAAACCAAACCGAGAAGATGAATATAAAAGGATTGAAGCA
GCTGGAGGGAAGGTGATACAGTGGAATGGCCATCGTGTTTTCGGTGTTCTTGCAATGTCT
AGGTCTATCGGAGATAAATACTTGAAGCCTTGGATAATTCCTGATCCAGAAGTAACGTTC
ATACCTCGAACCAAGGATGATGATTGCCTTATTCTTGCGAGTGATGGTTTATGGGATGTC
ATGACAAATGAAGAAGCTTGTGATATGGCTCGTAAACGTATACTCATGTGGCATAAAAAG
TACGGTGCAACGCTCCCCGTGGAAAGAGGTGAAGGAATTGATCCAGCGTCACAGGCAGCA
GCAGAATGCTTGTCGAATCGAGCTCTTCAGAAGGGCAGCAAGGACAACATAACAGTGATT
GTGGTGGACTTGAAAGCTCAAAGAAAATTCAAAACCAAAACTTCAACATAA