Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400075266
CDS Infomation

pacid=37445657 polypeptide=PGSC0003DMP400050963 locus=PGSC0003DMG401029274 ID=PGSC0003DMT400075266.v4.03 annot-version=v4.03
Sequence

ATGGCTTTACAACAACCATTTCTATCTGAATTACTCCACTCATCTTCAAAGAGGACAACA
CTTCCAAAAAGTTCACTTTTTTCTCTACAAATACCTCAAAGATTCAATTTTTATCTTCAA
AATAAGCAATTCAAGAAACAAGGAAGAAGTTGTTATGCAATTGCTGAGAATCTTGGAGCT
GAAGTACTTGATGAAGATCAAAGTGTGATTTTGGAAAATTCAAGTTTAGATGAATTGAGG
GGACAAAGGGAAATTGTTGGTTATGATTGGACTGAAGAATGGTATCCTTTGTATTTGACT
AAGAATGTACCTGATGATGCACCTTTAGGTCTTACTGTCTTTGATAAACAAGTTGTTTTG
TATAAAGATGGAAGTGGTGAACTTAGATGCTTTGAAGACAGATGCCCACATAGGTTGGCC
AAACTCTCTGAAGGACAACTGTATGATGGCAAACTGGAATGCTTGTATCATGGTTGGCAG
TTTGACGGAGATGGTAAATGTGTCAAGATACCACAGCTACCTGAAAATGCTAAAATTCCT
CGATCAGCTTGTACGAAGACATATGAAATTCGGGATTCCCAAGGAGTAGTCTGGATATGG
ATGTCTCACAGAACACCACCTAATGTTAACAAAATCCCCTGGTTTGAAAACTTTGACAGG
AAAGGATTTCGAGACATTTCTACTATTCATGAGCTCCCTTATGATCACTCTATTCTTCTT
GAAAATCTCATGGATCCTGCTCATGTCCCGATATCACACGATAGGACAGATTTTACAGCA
AAAAGGGAAGATGCTGGACCACTGTTTTTCGAGGTGACAGAAAGGACTAACCGGGGGTTT
GCAGGGTGGTGGGGTAAGGAAAAAGATCAAGGCAAAGCAAACTATACTCCGAACTTCTTA
CGTTTTGAATCTCCTTGTGTTCTTCAGAATAATAGAGAAATTGTTGATGAGAGTGGGGAG
AAGCATTACTTTTCAGGTCTTTTCCTTTGTAGACCATCTGGTCAAGGGAAATCCATGCTT
ATTGTCCGGTTTGGGAATACAAGAAAACGAACGGGGATACTTAAATTTATCCCAAACTGG
TTCTTGCACCAGAATGCAAGCAAGGTTTTCGAGCAAGATATGGGGTTCCTTTCGTCCCAA
AACGAAATCCTGATGAAGGAAAAGGTTCCAACAAAGAAACTATACTTGAACCTTAAGTCG
TCGGATACTTGGGTAGCTGAATACAGGAAGTGGATGGACAAAGTGGGGCACGGAATGCCT
TATCATTTCGGTCACAGCACCATTTTCCTGCCCCAACAACCTGCTGTCGTAGAGCACGCC
CCTGCTGGTTTCGTTGCCAATTTTTCAGCTGCTCAGCCAGCTAAAGGAGGAATTGGTGAT
ATGTATGCTCCGAACCCCGCCAACAGGTACTTCAGGCATGTTGTACATTGCAGGGATTGC
AGCAATGTTGTTAAAGCTTTTGAGACTTGGAAAAAGGCCCTCTCTGTTATCGCTCTCGTG
TCAACTGCATTCGCGATTCTAGTGTCTGGAAGACAATGGAAGGCCTTACTTTTGCTTTGG
ACGTCGCTATGTTTAGCTGGTGCATATGCTTGTTCAACAGCCATTGCAATGAACACAACC
AACTTCATAAGGACTCACAGAAGATTGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400050963
PEP Infomation

pacid=37445657 transcript=PGSC0003DMT400075266 locus=PGSC0003DMG401029274 ID=PGSC0003DMT400075266.v4.03 annot-version=v4.03
Sequence

MALQQPFLSELLHSSSKRTTLPKSSLFSLQIPQRFNFYLQNKQFKKQGRSCYAIAENLGA
EVLDEDQSVILENSSLDELRGQREIVGYDWTEEWYPLYLTKNVPDDAPLGLTVFDKQVVL
YKDGSGELRCFEDRCPHRLAKLSEGQLYDGKLECLYHGWQFDGDGKCVKIPQLPENAKIP
RSACTKTYEIRDSQGVVWIWMSHRTPPNVNKIPWFENFDRKGFRDISTIHELPYDHSILL
ENLMDPAHVPISHDRTDFTAKREDAGPLFFEVTERTNRGFAGWWGKEKDQGKANYTPNFL
RFESPCVLQNNREIVDESGEKHYFSGLFLCRPSGQGKSMLIVRFGNTRKRTGILKFIPNW
FLHQNASKVFEQDMGFLSSQNEILMKEKVPTKKLYLNLKSSDTWVAEYRKWMDKVGHGMP
YHFGHSTIFLPQQPAVVEHAPAGFVANFSAAQPAKGGIGDMYAPNPANRYFRHVVHCRDC
SNVVKAFETWKKALSVIALVSTAFAILVSGRQWKALLLLWTSLCLAGAYACSTAIAMNTT
NFIRTHRRL*

Transcript Sequence

Transcript ID

PGSC0003DMT400075266
Transcript Infomation

pacid=37445657 locus=PGSC0003DMG401029274 ID=PGSC0003DMT400075266.v4.03 annot-version=v4.03
Sequence

ATGGCTTTACAACAACCATTTCTATCTGAATTACTCCACTCATCTTCAAAGAGGACAACA
CTTCCAAAAAGTTCACTTTTTTCTCTACAAATACCTCAAAGATTCAATTTTTATCTTCAA
AATAAGCAATTCAAGAAACAAGGAAGAAGTTGTTATGCAATTGCTGAGAATCTTGGAGCT
GAAGTACTTGATGAAGATCAAAGTGTGATTTTGGAAAATTCAAGTTTAGATGAATTGAGG
GGACAAAGGGAAATTGTTGGTTATGATTGGACTGAAGAATGGTATCCTTTGTATTTGACT
AAGAATGTACCTGATGATGCACCTTTAGGTCTTACTGTCTTTGATAAACAAGTTGTTTTG
TATAAAGATGGAAGTGGTGAACTTAGATGCTTTGAAGACAGATGCCCACATAGGTTGGCC
AAACTCTCTGAAGGACAACTGTATGATGGCAAACTGGAATGCTTGTATCATGGTTGGCAG
TTTGACGGAGATGGTAAATGTGTCAAGATACCACAGCTACCTGAAAATGCTAAAATTCCT
CGATCAGCTTGTACGAAGACATATGAAATTCGGGATTCCCAAGGAGTAGTCTGGATATGG
ATGTCTCACAGAACACCACCTAATGTTAACAAAATCCCCTGGTTTGAAAACTTTGACAGG
AAAGGATTTCGAGACATTTCTACTATTCATGAGCTCCCTTATGATCACTCTATTCTTCTT
GAAAATCTCATGGATCCTGCTCATGTCCCGATATCACACGATAGGACAGATTTTACAGCA
AAAAGGGAAGATGCTGGACCACTGTTTTTCGAGGTGACAGAAAGGACTAACCGGGGGTTT
GCAGGGTGGTGGGGTAAGGAAAAAGATCAAGGCAAAGCAAACTATACTCCGAACTTCTTA
CGTTTTGAATCTCCTTGTGTTCTTCAGAATAATAGAGAAATTGTTGATGAGAGTGGGGAG
AAGCATTACTTTTCAGGTCTTTTCCTTTGTAGACCATCTGGTCAAGGGAAATCCATGCTT
ATTGTCCGGTTTGGGAATACAAGAAAACGAACGGGGATACTTAAATTTATCCCAAACTGG
TTCTTGCACCAGAATGCAAGCAAGGTTTTCGAGCAAGATATGGGGTTCCTTTCGTCCCAA
AACGAAATCCTGATGAAGGAAAAGGTTCCAACAAAGAAACTATACTTGAACCTTAAGTCG
TCGGATACTTGGGTAGCTGAATACAGGAAGTGGATGGACAAAGTGGGGCACGGAATGCCT
TATCATTTCGGTCACAGCACCATTTTCCTGCCCCAACAACCTGCTGTCGTAGAGCACGCC
CCTGCTGGTTTCGTTGCCAATTTTTCAGCTGCTCAGCCAGCTAAAGGAGGAATTGGTGAT
ATGTATGCTCCGAACCCCGCCAACAGGTACTTCAGGCATGTTGTACATTGCAGGGATTGC
AGCAATGTTGTTAAAGCTTTTGAGACTTGGAAAAAGGCCCTCTCTGTTATCGCTCTCGTG
TCAACTGCATTCGCGATTCTAGTGTCTGGAAGACAATGGAAGGCCTTACTTTTGCTTTGG
ACGTCGCTATGTTTAGCTGGTGCATATGCTTGTTCAACAGCCATTGCAATGAACACAACC
AACTTCATAAGGACTCACAGAAGATTGTAA