Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400075259
CDS Infomation

pacid=37448818 polypeptide=PGSC0003DMP400050958 locus=PGSC0003DMG400029270 ID=PGSC0003DMT400075259.v4.03 annot-version=v4.03
Sequence

ATGGCTATAGAACATGATACATTATTCCTCGATTCATTGAATTCAACTGCTACATCTTCA
TCAGCTTCACTTGATCTGGATCATCCATTCGAATCAACGCCTTCTTCTTCATCTCCGTTA
TCTCCTTCTTATACAAAACTCAACGCCCGTGCAATTGCATTTATTCCACGAAGTTCGTCT
TCTCCATCATTATCATCAGCTATGTTGGCTAAATCATCTTCCTCGCCTTCATTGGCGACA
ATGTCACATCCTCAATCCTCCCGGGCCGATTTAAATAATCGGCCCGGGAGTAGGATCGGG
CCTGGATCAGGGCCCGTTAATGGACAGACGGTGGTGCATCTTATTGCAACACCGTCTGCT
ACATTTCATCAGATCACTACGCATGTTCCTGTACAAAATTATATTTATGCGTCTCAATTG
CCTGTGCAATATCCTTATGGTGGTGGCATTGGAAGGGGATTTGTTGATCATGGCGGTTTG
CCGGCGGTGGTGGTTATTGGTGCCGATTCTGAACGGTTAAGTGATGAAGCTTGTCAAAAA
ATTATTAATCAGGTGGAATTTTATTTTAGTGATATAAATTTGGCAACAACTGATCATCTA
ATAAGGATTATGTTTAAGGATCCAGAAGGATATGTACCAATGTCTGTGGTTGCATCATTC
AAGAAGATTAAAGCTCTTACGAGTAATCATGCCTACGTTGCGAAAATTCTGCAGTGCTCC
ACAAAGCTTGTGGTTAGTGAAGATGGAAGAAAGGTTAGACGCCAATTTCCGCTGTCTGAA
AAGGACTTGGAAGAGCTGCAATCTCGCATAGTGGTTGCTGAGAATTTACCCGATGATCAC
TGCCACCAGAACCTCATGAAGATTTTCTCAGCTGTTGGAAGTGTAAGAATGATTCGTACA
TGCCAACCACAGTTAAATGGCGGGGCTTCTGCAGCGTCTAGAACTGGAAAGTCAGATAGC
ACATTGTATAGTAACAAGTTGCATGCATTTGTGGAATACGAAAGTATTGAATTGGCTGAG
AAGGCGGTTATGGAGCTAAATGATGAGGATAACTGGCGAAATGGTCTGAAAGTCCGTATA
CTGAACAGGTGCACGGGAAAATCTGGTCAAATTCGAGGGAAGAAAGTTGGTTACGAGAGT
GAGGTCAGCTTCAAGGAAGACGATACTTCATCAGAGGCCAGCGAGAAACATAGTGACGAC
CTGTGGCACCACCTTGATACTCACCTGTATGACCTTGCAGAGGAGCATGGCGTCGATGGG
CAGAGGAAAGGACTCAATCGCAGTTGGGTTAAGGGACTTGGTCAGGGACGTGGACGTCCT
CAGTTTCATCAAACCAGTCGTGGAGGTCATTTAGGTACTCCCCAGGCAAGTATGAGGCGT
GCATACAGTGTGGGAAGTGCACTATCAAGCATCAATCGTTTTAGTCTAGCAGGGCAACCC
TCAATGCTTTCTGATCAGTCAGCACCAGTCAAGCAAGCTTCTGTCCCTCGCATGCCAGAT
GGCACCAGGGGCTTCTCCATGGGTCGAGGTAAACCTGTTGCGATTAAAACAACATAA

Peptide Sequence

PEP ID

PGSC0003DMP400050958
PEP Infomation

pacid=37448818 transcript=PGSC0003DMT400075259 locus=PGSC0003DMG400029270 ID=PGSC0003DMT400075259.v4.03 annot-version=v4.03
Sequence

MAIEHDTLFLDSLNSTATSSSASLDLDHPFESTPSSSSPLSPSYTKLNARAIAFIPRSSS
SPSLSSAMLAKSSSSPSLATMSHPQSSRADLNNRPGSRIGPGSGPVNGQTVVHLIATPSA
TFHQITTHVPVQNYIYASQLPVQYPYGGGIGRGFVDHGGLPAVVVIGADSERLSDEACQK
IINQVEFYFSDINLATTDHLIRIMFKDPEGYVPMSVVASFKKIKALTSNHAYVAKILQCS
TKLVVSEDGRKVRRQFPLSEKDLEELQSRIVVAENLPDDHCHQNLMKIFSAVGSVRMIRT
CQPQLNGGASAASRTGKSDSTLYSNKLHAFVEYESIELAEKAVMELNDEDNWRNGLKVRI
LNRCTGKSGQIRGKKVGYESEVSFKEDDTSSEASEKHSDDLWHHLDTHLYDLAEEHGVDG
QRKGLNRSWVKGLGQGRGRPQFHQTSRGGHLGTPQASMRRAYSVGSALSSINRFSLAGQP
SMLSDQSAPVKQASVPRMPDGTRGFSMGRGKPVAIKTT*

Transcript Sequence

Transcript ID

PGSC0003DMT400075259
Transcript Infomation

pacid=37448818 locus=PGSC0003DMG400029270 ID=PGSC0003DMT400075259.v4.03 annot-version=v4.03
Sequence

ATGGCTATAGAACATGATACATTATTCCTCGATTCATTGAATTCAACTGCTACATCTTCA
TCAGCTTCACTTGATCTGGATCATCCATTCGAATCAACGCCTTCTTCTTCATCTCCGTTA
TCTCCTTCTTATACAAAACTCAACGCCCGTGCAATTGCATTTATTCCACGAAGTTCGTCT
TCTCCATCATTATCATCAGCTATGTTGGCTAAATCATCTTCCTCGCCTTCATTGGCGACA
ATGTCACATCCTCAATCCTCCCGGGCCGATTTAAATAATCGGCCCGGGAGTAGGATCGGG
CCTGGATCAGGGCCCGTTAATGGACAGACGGTGGTGCATCTTATTGCAACACCGTCTGCT
ACATTTCATCAGATCACTACGCATGTTCCTGTACAAAATTATATTTATGCGTCTCAATTG
CCTGTGCAATATCCTTATGGTGGTGGCATTGGAAGGGGATTTGTTGATCATGGCGGTTTG
CCGGCGGTGGTGGTTATTGGTGCCGATTCTGAACGGTTAAGTGATGAAGCTTGTCAAAAA
ATTATTAATCAGGTGGAATTTTATTTTAGTGATATAAATTTGGCAACAACTGATCATCTA
ATAAGGATTATGTTTAAGGATCCAGAAGGATATGTACCAATGTCTGTGGTTGCATCATTC
AAGAAGATTAAAGCTCTTACGAGTAATCATGCCTACGTTGCGAAAATTCTGCAGTGCTCC
ACAAAGCTTGTGGTTAGTGAAGATGGAAGAAAGGTTAGACGCCAATTTCCGCTGTCTGAA
AAGGACTTGGAAGAGCTGCAATCTCGCATAGTGGTTGCTGAGAATTTACCCGATGATCAC
TGCCACCAGAACCTCATGAAGATTTTCTCAGCTGTTGGAAGTGTAAGAATGATTCGTACA
TGCCAACCACAGTTAAATGGCGGGGCTTCTGCAGCGTCTAGAACTGGAAAGTCAGATAGC
ACATTGTATAGTAACAAGTTGCATGCATTTGTGGAATACGAAAGTATTGAATTGGCTGAG
AAGGCGGTTATGGAGCTAAATGATGAGGATAACTGGCGAAATGGTCTGAAAGTCCGTATA
CTGAACAGGTGCACGGGAAAATCTGGTCAAATTCGAGGGAAGAAAGTTGGTTACGAGAGT
GAGGTCAGCTTCAAGGAAGACGATACTTCATCAGAGGCCAGCGAGAAACATAGTGACGAC
CTGTGGCACCACCTTGATACTCACCTGTATGACCTTGCAGAGGAGCATGGCGTCGATGGG
CAGAGGAAAGGACTCAATCGCAGTTGGGTTAAGGGACTTGGTCAGGGACGTGGACGTCCT
CAGTTTCATCAAACCAGTCGTGGAGGTCATTTAGGTACTCCCCAGGCAAGTATGAGGCGT
GCATACAGTGTGGGAAGTGCACTATCAAGCATCAATCGTTTTAGTCTAGCAGGGCAACCC
TCAATGCTTTCTGATCAGTCAGCACCAGTCAAGCAAGCTTCTGTCCCTCGCATGCCAGAT
GGCACCAGGGGCTTCTCCATGGGTCGAGGTAAACCTGTTGCGATTAAAACAACATAA