Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400075193
CDS Infomation

pacid=37445903 polypeptide=PGSC0003DMP400050931 locus=PGSC0003DMG400029252 ID=PGSC0003DMT400075193.v4.03 annot-version=v4.03
Sequence

ATGAGTTTTAGTAAGTTCAAAGATGAAGATGATGTCAAGTCGCTTCGATCACATTCTTTT
ACGTGGAGATGTAAAAGTTTCTCATGGCGTGATAGACCTTTGGAGAGATACGCAGCATGT
GATGATCATAATGATCACACAGAAGAAGGTGAAAATGGCTTGATCAGGAGTTCAATTGGT
GTGTTGAACGAATCGTTCTATACACCTAGGTGTAATGAAGAACCTAATTCTGCAAGGAGT
GTCGCCAGTGGTTTTGAACCTTTCGAAGATGCATCTGATGGAGGCAGTTTAGAGCAGTCC
ATGCCTAATCTCGTTGATGATTCTGTTTTCATTTCTCCGGACTTGTATGATTTTTTCCAG
TCTTATCTCCCTAATATAGTGAAAGGCTGTCAATGGTCCTTGTTGTATAGCACCGCGAAA
CATGGTATATCACTTCGTACGCTAATTCGCATGAGTGCTAATTCTTCTGGTCCTTGCTTG
CTGATTACCGGCGATAAACAAGGTGCTGTATTTGGTGGGTTGCTTGAGGCACCACTCAGG
CCTACCGCGAAGCGAAAGTACCAAGGAACAGTTCAGTCATTTGTATTCACAACTGTATAT
GGTGAACCAAGGCTATTCAGACCTACAGGTGCCAACAGATATTTTTACTTATGCATGAAT
GAAATCCTGGCACTTGGAGGAGGTGGACATTTCGCGTTATGTTTGGATGGAGATCTGTTA
TCTGGTAATAGTGGACCTTGTGATACGTTTGGGAACTTATGCTTGGCACATGATGAAGAG
TTTGAGTTGAAAAATGTTGAGCTGTGGGGTTTTACACATGCATCTCGATACCTCACCTCG
TAG

Peptide Sequence

PEP ID

PGSC0003DMP400050931
PEP Infomation

pacid=37445903 transcript=PGSC0003DMT400075193 locus=PGSC0003DMG400029252 ID=PGSC0003DMT400075193.v4.03 annot-version=v4.03
Sequence

MSFSKFKDEDDVKSLRSHSFTWRCKSFSWRDRPLERYAACDDHNDHTEEGENGLIRSSIG
VLNESFYTPRCNEEPNSARSVASGFEPFEDASDGGSLEQSMPNLVDDSVFISPDLYDFFQ
SYLPNIVKGCQWSLLYSTAKHGISLRTLIRMSANSSGPCLLITGDKQGAVFGGLLEAPLR
PTAKRKYQGTVQSFVFTTVYGEPRLFRPTGANRYFYLCMNEILALGGGGHFALCLDGDLL
SGNSGPCDTFGNLCLAHDEEFELKNVELWGFTHASRYLTS*

Transcript Sequence

Transcript ID

PGSC0003DMT400075193
Transcript Infomation

pacid=37445903 locus=PGSC0003DMG400029252 ID=PGSC0003DMT400075193.v4.03 annot-version=v4.03
Sequence

ATGAGTTTTAGTAAGTTCAAAGATGAAGATGATGTCAAGTCGCTTCGATCACATTCTTTT
ACGTGGAGATGTAAAAGTTTCTCATGGCGTGATAGACCTTTGGAGAGATACGCAGCATGT
GATGATCATAATGATCACACAGAAGAAGGTGAAAATGGCTTGATCAGGAGTTCAATTGGT
GTGTTGAACGAATCGTTCTATACACCTAGGTGTAATGAAGAACCTAATTCTGCAAGGAGT
GTCGCCAGTGGTTTTGAACCTTTCGAAGATGCATCTGATGGAGGCAGTTTAGAGCAGTCC
ATGCCTAATCTCGTTGATGATTCTGTTTTCATTTCTCCGGACTTGTATGATTTTTTCCAG
TCTTATCTCCCTAATATAGTGAAAGGCTGTCAATGGTCCTTGTTGTATAGCACCGCGAAA
CATGGTATATCACTTCGTACGCTAATTCGCATGAGTGCTAATTCTTCTGGTCCTTGCTTG
CTGATTACCGGCGATAAACAAGGTGCTGTATTTGGTGGGTTGCTTGAGGCACCACTCAGG
CCTACCGCGAAGCGAAAGTACCAAGGAACAGTTCAGTCATTTGTATTCACAACTGTATAT
GGTGAACCAAGGCTATTCAGACCTACAGGTGCCAACAGATATTTTTACTTATGCATGAAT
GAAATCCTGGCACTTGGAGGAGGTGGACATTTCGCGTTATGTTTGGATGGAGATCTGTTA
TCTGGTAATAGTGGACCTTGTGATACGTTTGGGAACTTATGCTTGGCACATGATGAAGAG
TTTGAGTTGAAAAATGTTGAGCTGTGGGGTTTTACACATGCATCTCGATACCTCACCTCG
TAG