Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400075072
CDS Infomation

pacid=37429687 polypeptide=PGSC0003DMP400050846 locus=PGSC0003DMG400029201 ID=PGSC0003DMT400075072.v4.03 annot-version=v4.03
Sequence

ATGACTACCTCTTCCCCTAATAAGTCCCGTCCCTTAGCTAATTTTCACTCAACTATTTGG
GGATATCATTTCCTTTCTTATACTCCTCAACTCACTGAAACTACTAATCAAGAAAAAGTT
GAAGTTGATGAGTACAAAGAGAGAATTAGGAAAATGTTGGTGGAAGCTCCTGAGGGTAGT
CTACAAAAACTTGTGTTGATAGACGCAATGCAACGATTGGGAGTCGCATATCATTTTGAT
AACCAAATTGAAACATCCATTCAAAACATTTTTGATGCGTTCAAACAGAATGATGATGAC
AACCTTCACGTTGTTTCTCTTTATTTCCGGCTTGTGAGGCAACAAGGACATTACATGTCT
TCTGATGTCTTCAAGAAATTCACCGAACAAGATGGAAAATTCAAGGAAACGCTTACTAAT
GATGTCCAAGGATTATTAAGTCTGTATGAAGCATCACATTTGAGAGTGCGCGATGAGGAG
ATTCTTGAAGAAGCTCTTACCTTTACCACTACTCATCTCGAGTCTATAGTCTCCAACTTG
AGCAATAACAACTCTCTTAAGGTTGAGGTTACTGAAGCCTTAAGTCAGCCTATTCGCATG
ACTTTACCAAGGGTGGGAGCAAAGAAATACATATCCATTTACGAAAACAATGATGCACAC
AATCATTTGCTTTTGAAATTTGCTAAATTGGATTTTAACATGCTGCAAAAATTCCACCAA
AGAGAGCTTAGTGAGCTTACAAGGTGGTGGAAAGATTTGGATTTTGCAAATAAAATTCCA
TATGCAAGGGACAGACTGGTTGAGTGTTACTTTTGGATATTAGGAGTGTATTTTGAGCCA
AAGTATAGTCGTGCTAGAAAAATGATGACAAAAGTACTCAAGATCACCTCGGTTATTGAT
GACACTTTTGATGCTTATGCAACCTATGACGAACTTGTGACTTTCACTGATGCAATCCAG
AGATGGGATGCTAATGCAATCGATTCAATACCGCCATATATGAGACCTGCTTATCAAGCT
CTTCTAGACATTTACAGTGAAATGGAACAAGTGTTGTCCAAAGAAGGTAAATTGGACCGT
GTATACTATGCAAAATATGAGATGAAAAAGTTGGTGAGAGCCTATTTTAAGGAAGCCCAA
TGGTTGAATGATGATAACCATATTCCAAAATATGAGGAACACATGGAGAATGCAATCGTA
AGTGCTGGCTATATGATGGGAGCAACAAATTGCTTGGTCGGTATGGAGGAATTTATATCC
AAAGAGACTTTTGAATGGTTAATGAATGATCCTTTGATAGTTCGAGCTTCCTCATTGATT
GGCAGAGCAATGGACGATATTGTTGGACATGAATTTGAACAAGAAAGAGGACATGTAGCT
TCAATTATTGAATGTTACATGAAAGAATATGGAGCTTCAAAGGAAGAGACTTACATTAAA
TTCCAGAAAGAGGTCACCAATGCATGGAAGGACATAAACAAAGAATTCGTCGTCCGTCCA
ACTGAAGTACCAATGTTTGTTCTTGAACGAGTTTTAAATTTGACACGTGTGATAGACACG
TTATATAAAGAGGAAGATGAATACACAAACGCCAAAGGCAAACTTAGAAACATGATTAAC
TCGATACTGATTGAATCTATCAAATTATAA

Peptide Sequence

PEP ID

PGSC0003DMP400050846
PEP Infomation

pacid=37429687 transcript=PGSC0003DMT400075072 locus=PGSC0003DMG400029201 ID=PGSC0003DMT400075072.v4.03 annot-version=v4.03
Sequence

MTTSSPNKSRPLANFHSTIWGYHFLSYTPQLTETTNQEKVEVDEYKERIRKMLVEAPEGS
LQKLVLIDAMQRLGVAYHFDNQIETSIQNIFDAFKQNDDDNLHVVSLYFRLVRQQGHYMS
SDVFKKFTEQDGKFKETLTNDVQGLLSLYEASHLRVRDEEILEEALTFTTTHLESIVSNL
SNNNSLKVEVTEALSQPIRMTLPRVGAKKYISIYENNDAHNHLLLKFAKLDFNMLQKFHQ
RELSELTRWWKDLDFANKIPYARDRLVECYFWILGVYFEPKYSRARKMMTKVLKITSVID
DTFDAYATYDELVTFTDAIQRWDANAIDSIPPYMRPAYQALLDIYSEMEQVLSKEGKLDR
VYYAKYEMKKLVRAYFKEAQWLNDDNHIPKYEEHMENAIVSAGYMMGATNCLVGMEEFIS
KETFEWLMNDPLIVRASSLIGRAMDDIVGHEFEQERGHVASIIECYMKEYGASKEETYIK
FQKEVTNAWKDINKEFVVRPTEVPMFVLERVLNLTRVIDTLYKEEDEYTNAKGKLRNMIN
SILIESIKL*

Transcript Sequence

Transcript ID

PGSC0003DMT400075072
Transcript Infomation

pacid=37429687 locus=PGSC0003DMG400029201 ID=PGSC0003DMT400075072.v4.03 annot-version=v4.03
Sequence

ATGACTACCTCTTCCCCTAATAAGTCCCGTCCCTTAGCTAATTTTCACTCAACTATTTGG
GGATATCATTTCCTTTCTTATACTCCTCAACTCACTGAAACTACTAATCAAGAAAAAGTT
GAAGTTGATGAGTACAAAGAGAGAATTAGGAAAATGTTGGTGGAAGCTCCTGAGGGTAGT
CTACAAAAACTTGTGTTGATAGACGCAATGCAACGATTGGGAGTCGCATATCATTTTGAT
AACCAAATTGAAACATCCATTCAAAACATTTTTGATGCGTTCAAACAGAATGATGATGAC
AACCTTCACGTTGTTTCTCTTTATTTCCGGCTTGTGAGGCAACAAGGACATTACATGTCT
TCTGATGTCTTCAAGAAATTCACCGAACAAGATGGAAAATTCAAGGAAACGCTTACTAAT
GATGTCCAAGGATTATTAAGTCTGTATGAAGCATCACATTTGAGAGTGCGCGATGAGGAG
ATTCTTGAAGAAGCTCTTACCTTTACCACTACTCATCTCGAGTCTATAGTCTCCAACTTG
AGCAATAACAACTCTCTTAAGGTTGAGGTTACTGAAGCCTTAAGTCAGCCTATTCGCATG
ACTTTACCAAGGGTGGGAGCAAAGAAATACATATCCATTTACGAAAACAATGATGCACAC
AATCATTTGCTTTTGAAATTTGCTAAATTGGATTTTAACATGCTGCAAAAATTCCACCAA
AGAGAGCTTAGTGAGCTTACAAGGTGGTGGAAAGATTTGGATTTTGCAAATAAAATTCCA
TATGCAAGGGACAGACTGGTTGAGTGTTACTTTTGGATATTAGGAGTGTATTTTGAGCCA
AAGTATAGTCGTGCTAGAAAAATGATGACAAAAGTACTCAAGATCACCTCGGTTATTGAT
GACACTTTTGATGCTTATGCAACCTATGACGAACTTGTGACTTTCACTGATGCAATCCAG
AGATGGGATGCTAATGCAATCGATTCAATACCGCCATATATGAGACCTGCTTATCAAGCT
CTTCTAGACATTTACAGTGAAATGGAACAAGTGTTGTCCAAAGAAGGTAAATTGGACCGT
GTATACTATGCAAAATATGAGATGAAAAAGTTGGTGAGAGCCTATTTTAAGGAAGCCCAA
TGGTTGAATGATGATAACCATATTCCAAAATATGAGGAACACATGGAGAATGCAATCGTA
AGTGCTGGCTATATGATGGGAGCAACAAATTGCTTGGTCGGTATGGAGGAATTTATATCC
AAAGAGACTTTTGAATGGTTAATGAATGATCCTTTGATAGTTCGAGCTTCCTCATTGATT
GGCAGAGCAATGGACGATATTGTTGGACATGAATTTGAACAAGAAAGAGGACATGTAGCT
TCAATTATTGAATGTTACATGAAAGAATATGGAGCTTCAAAGGAAGAGACTTACATTAAA
TTCCAGAAAGAGGTCACCAATGCATGGAAGGACATAAACAAAGAATTCGTCGTCCGTCCA
ACTGAAGTACCAATGTTTGTTCTTGAACGAGTTTTAAATTTGACACGTGTGATAGACACG
TTATATAAAGAGGAAGATGAATACACAAACGCCAAAGGCAAACTTAGAAACATGATTAAC
TCGATACTGATTGAATCTATCAAATTATAA