Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400075053
CDS Infomation

pacid=37455216 polypeptide=PGSC0003DMP400050834 locus=PGSC0003DMG400029192 ID=PGSC0003DMT400075053.v4.03 annot-version=v4.03
Sequence

ATGGGGTCAATCAATTTCAACCCATTCAACAATAACTGGTTCAACAAACCTTCAACACCA
TTTCAACCAATTAATCTTCTATCCCACTTTGATTCCCTAAAGCCCCATCAACATTCTCCG
CCTTTTGCAGCTATTTCAAATCCATTTTCAAGAAAACCCAAAACACCTCCTGAAAAACCA
GGTCATTACCGGAAAATGCTGGACCAGTTCCATTGGGAATGTGAGACCCGACCCGACTTT
CGACATGCTCCGAAAGTTGAGCGGATTATGAATGAGGATCCGATTTTTGAGAAAAAGGAG
AACCCAACTAAGGAAGAGATTGAGGAGAATGAGAAGTGGTTCGCTGAGTTACGGGAAAGC
CCAGTGGTTCAGTTCTTGCTCCAAGCTGAAGAGATTGCTGATAAAATCAATGACCTTGAG
CTTCAAGAGAATTCAGCTCCATTTCGAAAGGAAGATAAGAAACTGTGGCAGGCAGTGCCA
AATGTCATTGGATTGGATGGGAGGCCAATGCCCAGAAAGGCCATAAAGACAAAGAAGGAA
TCAGATGATAAATTTTGGGATTTTGCAAGGCAGTTCTTTTTTGGGCTTTGGGGATTTCGT
CAACGACCATACCCACCTGGAAGGCCCATTGATGCTGCACAGGCTATTGGATACAAAAGG
CTTGAAAAGCGATATCATGATTTTATTATGAGAAGCGGTGGGTGGTTCTACAAGGATCGA
TTAGGTCGTTCGAGGGGACCTATGGAATTGATACAGCTTAAGACTGCTTGGGGTTCAGGA
ATCATTGATAAGCACACCTTCATTTGGGGTGAGGATATGGATGAATGGGCTCCCATCGGA
ATGGTATATGGTCTGGAAAAAGCAATTGCCACTTGGGAAGTTAGACTAGGTGCTGCTGGT
ACTGCTCTCCTTCACAAACTACAGAAGGGTATACCTCCTTGGGTTCCTCTCAGAGGACAT
GAGCCGAAGACATATAAGCAGATGCAAGAAGAAGCTTATGAAAGTAGAAGGCGTGATTTG
GCTGTGCTAGAAGCAAATGATGGTGTCTGGCCTGGTGTAAGGACTCCGAGTCATACCATG
TTTCTTTGGGCTAGTGGCTCAGAGCTGACATCAATTTTGGAGGCTGACCACATGCCAAAC
AAATATATCCCAAAAGATCTCAGGAAAGAATTAGAGAAGGTTATTCCTGGATTGAGGCCA
TGGGAGGTTCTAAGTGTTGAACAAGCCATGGATCAAATAACATATGGTGGTGAATGGTAT
CGCGAGCCTCTTGGTTCATACACAACAGGCCCTCCATATATTGCTGAATGGAATAAGGAT
GTCATTAGATTGTTTCAGATATTCCACGACCTCAGTGTCCGAGTCTACAACAAGCTGAAC
AGGACAGTTCCTGGTTTTGGTACAGTAATGGAGAAAGTTCAAATTGATTCAGCTGCCAGA
GAAACCAGAAGGATGCAGAAGAGGGCTGCAAAGAAGATGGCCGAGGAGGAAATTGCATTG
TTTGGCAGTACACGAAATGATGATGAGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400050834
PEP Infomation

pacid=37455216 transcript=PGSC0003DMT400075053 locus=PGSC0003DMG400029192 ID=PGSC0003DMT400075053.v4.03 annot-version=v4.03
Sequence

MGSINFNPFNNNWFNKPSTPFQPINLLSHFDSLKPHQHSPPFAAISNPFSRKPKTPPEKP
GHYRKMLDQFHWECETRPDFRHAPKVERIMNEDPIFEKKENPTKEEIEENEKWFAELRES
PVVQFLLQAEEIADKINDLELQENSAPFRKEDKKLWQAVPNVIGLDGRPMPRKAIKTKKE
SDDKFWDFARQFFFGLWGFRQRPYPPGRPIDAAQAIGYKRLEKRYHDFIMRSGGWFYKDR
LGRSRGPMELIQLKTAWGSGIIDKHTFIWGEDMDEWAPIGMVYGLEKAIATWEVRLGAAG
TALLHKLQKGIPPWVPLRGHEPKTYKQMQEEAYESRRRDLAVLEANDGVWPGVRTPSHTM
FLWASGSELTSILEADHMPNKYIPKDLRKELEKVIPGLRPWEVLSVEQAMDQITYGGEWY
REPLGSYTTGPPYIAEWNKDVIRLFQIFHDLSVRVYNKLNRTVPGFGTVMEKVQIDSAAR
ETRRMQKRAAKKMAEEEIALFGSTRNDDE*

Transcript Sequence

Transcript ID

PGSC0003DMT400075053
Transcript Infomation

pacid=37455216 locus=PGSC0003DMG400029192 ID=PGSC0003DMT400075053.v4.03 annot-version=v4.03
Sequence

ATGGGGTCAATCAATTTCAACCCATTCAACAATAACTGGTTCAACAAACCTTCAACACCA
TTTCAACCAATTAATCTTCTATCCCACTTTGATTCCCTAAAGCCCCATCAACATTCTCCG
CCTTTTGCAGCTATTTCAAATCCATTTTCAAGAAAACCCAAAACACCTCCTGAAAAACCA
GGTCATTACCGGAAAATGCTGGACCAGTTCCATTGGGAATGTGAGACCCGACCCGACTTT
CGACATGCTCCGAAAGTTGAGCGGATTATGAATGAGGATCCGATTTTTGAGAAAAAGGAG
AACCCAACTAAGGAAGAGATTGAGGAGAATGAGAAGTGGTTCGCTGAGTTACGGGAAAGC
CCAGTGGTTCAGTTCTTGCTCCAAGCTGAAGAGATTGCTGATAAAATCAATGACCTTGAG
CTTCAAGAGAATTCAGCTCCATTTCGAAAGGAAGATAAGAAACTGTGGCAGGCAGTGCCA
AATGTCATTGGATTGGATGGGAGGCCAATGCCCAGAAAGGCCATAAAGACAAAGAAGGAA
TCAGATGATAAATTTTGGGATTTTGCAAGGCAGTTCTTTTTTGGGCTTTGGGGATTTCGT
CAACGACCATACCCACCTGGAAGGCCCATTGATGCTGCACAGGCTATTGGATACAAAAGG
CTTGAAAAGCGATATCATGATTTTATTATGAGAAGCGGTGGGTGGTTCTACAAGGATCGA
TTAGGTCGTTCGAGGGGACCTATGGAATTGATACAGCTTAAGACTGCTTGGGGTTCAGGA
ATCATTGATAAGCACACCTTCATTTGGGGTGAGGATATGGATGAATGGGCTCCCATCGGA
ATGGTATATGGTCTGGAAAAAGCAATTGCCACTTGGGAAGTTAGACTAGGTGCTGCTGGT
ACTGCTCTCCTTCACAAACTACAGAAGGGTATACCTCCTTGGGTTCCTCTCAGAGGACAT
GAGCCGAAGACATATAAGCAGATGCAAGAAGAAGCTTATGAAAGTAGAAGGCGTGATTTG
GCTGTGCTAGAAGCAAATGATGGTGTCTGGCCTGGTGTAAGGACTCCGAGTCATACCATG
TTTCTTTGGGCTAGTGGCTCAGAGCTGACATCAATTTTGGAGGCTGACCACATGCCAAAC
AAATATATCCCAAAAGATCTCAGGAAAGAATTAGAGAAGGTTATTCCTGGATTGAGGCCA
TGGGAGGTTCTAAGTGTTGAACAAGCCATGGATCAAATAACATATGGTGGTGAATGGTAT
CGCGAGCCTCTTGGTTCATACACAACAGGCCCTCCATATATTGCTGAATGGAATAAGGAT
GTCATTAGATTGTTTCAGATATTCCACGACCTCAGTGTCCGAGTCTACAACAAGCTGAAC
AGGACAGTTCCTGGTTTTGGTACAGTAATGGAGAAAGTTCAAATTGATTCAGCTGCCAGA
GAAACCAGAAGGATGCAGAAGAGGGCTGCAAAGAAGATGGCCGAGGAGGAAATTGCATTG
TTTGGCAGTACACGAAATGATGATGAGTGA