Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400075017
CDS Infomation

pacid=37464095 polypeptide=PGSC0003DMP400050812 locus=PGSC0003DMG400029177 ID=PGSC0003DMT400075017.v4.03 annot-version=v4.03
Sequence

ATGGCGTTCAAGAAAACATTACCCCAACGTATTTTTAGTGCATACAAATTTAGTGCTCCA
TCTCTAACAACATGCCGTATTGCTTCATCAACCTTGGTGGAGGCAAAATCTTTTAGTTAT
GATAAAATTACAACGACCTCGGATCCCCGGCGATTCCTTCACCAATCATTGGCATCCTCG
CTGGAGATCCAAAGGTCACTAATCCCCACGGGAGAAAAACTCCGCGAGATATTACATGAG
ATGGACGTTATTACAAGAGATAGGATGAGATTAATTAATGGAACACTCTTGCCTCCACGG
ACCCCACCGAGACCGGAGTCTGTAGAGGATGCGAGAAAGATTTTAAGATTGACACAACTT
GAGACGTTGAAATCGAGGATAAAGAAAATCGAAAAGAGTTGGATTTTGTTTGCTGAATTT
ATTGAAATTTGTAAGGAAACATGTTTGGATAATGATCAAGGCATGGAATTTGCTAAGAAG
CTTGACGATTCGGGTGATGTTATTGTTTTGGGAAACGTTGTTTTTCTCCGGCCTAATCAG
GTGGTTCAAGCCATGCAAGAACTAATGCCAATGCACAACCCAAATCATGAGAAAGAAAGA
ATGAAGGAGCTTGAAGAAATGGAGGAGGAAAAAACATCAATTGACAAGAAGGCAGAATTA
TTAGTACGTAAAGAAATGTGGTTTGGACTTGGATGTTTGGTAATTCAGACAACAGCTTTC
ATGAGGTTCACTTTTTGGGACTTAACATGGGATGTTATGGAACCAATTTGTTTCTACCTC
ACATCAGCATATTTCATGGCTACTTATTTTTTCTTTCTTAAGACATCCAAAGAGCCTTCT
TTTCAAGGCTTCTTCCAGGCACGTTTTAGTACAAAGCAAAAACGACTTATGAAACTTCAT
AATTTCGATCTTCAGAGGTATAATGAGCTCCGGAGAGCTCACTATCCTCAATCATCGATT
GCCAATTAA

Peptide Sequence

PEP ID

PGSC0003DMP400050812
PEP Infomation

pacid=37464095 transcript=PGSC0003DMT400075017 locus=PGSC0003DMG400029177 ID=PGSC0003DMT400075017.v4.03 annot-version=v4.03
Sequence

MAFKKTLPQRIFSAYKFSAPSLTTCRIASSTLVEAKSFSYDKITTTSDPRRFLHQSLASS
LEIQRSLIPTGEKLREILHEMDVITRDRMRLINGTLLPPRTPPRPESVEDARKILRLTQL
ETLKSRIKKIEKSWILFAEFIEICKETCLDNDQGMEFAKKLDDSGDVIVLGNVVFLRPNQ
VVQAMQELMPMHNPNHEKERMKELEEMEEEKTSIDKKAELLVRKEMWFGLGCLVIQTTAF
MRFTFWDLTWDVMEPICFYLTSAYFMATYFFFLKTSKEPSFQGFFQARFSTKQKRLMKLH
NFDLQRYNELRRAHYPQSSIAN*

Transcript Sequence

Transcript ID

PGSC0003DMT400075017
Transcript Infomation

pacid=37464095 locus=PGSC0003DMG400029177 ID=PGSC0003DMT400075017.v4.03 annot-version=v4.03
Sequence

ATGGCGTTCAAGAAAACATTACCCCAACGTATTTTTAGTGCATACAAATTTAGTGCTCCA
TCTCTAACAACATGCCGTATTGCTTCATCAACCTTGGTGGAGGCAAAATCTTTTAGTTAT
GATAAAATTACAACGACCTCGGATCCCCGGCGATTCCTTCACCAATCATTGGCATCCTCG
CTGGAGATCCAAAGGTCACTAATCCCCACGGGAGAAAAACTCCGCGAGATATTACATGAG
ATGGACGTTATTACAAGAGATAGGATGAGATTAATTAATGGAACACTCTTGCCTCCACGG
ACCCCACCGAGACCGGAGTCTGTAGAGGATGCGAGAAAGATTTTAAGATTGACACAACTT
GAGACGTTGAAATCGAGGATAAAGAAAATCGAAAAGAGTTGGATTTTGTTTGCTGAATTT
ATTGAAATTTGTAAGGAAACATGTTTGGATAATGATCAAGGCATGGAATTTGCTAAGAAG
CTTGACGATTCGGGTGATGTTATTGTTTTGGGAAACGTTGTTTTTCTCCGGCCTAATCAG
GTGGTTCAAGCCATGCAAGAACTAATGCCAATGCACAACCCAAATCATGAGAAAGAAAGA
ATGAAGGAGCTTGAAGAAATGGAGGAGGAAAAAACATCAATTGACAAGAAGGCAGAATTA
TTAGTACGTAAAGAAATGTGGTTTGGACTTGGATGTTTGGTAATTCAGACAACAGCTTTC
ATGAGGTTCACTTTTTGGGACTTAACATGGGATGTTATGGAACCAATTTGTTTCTACCTC
ACATCAGCATATTTCATGGCTACTTATTTTTTCTTTCTTAAGACATCCAAAGAGCCTTCT
TTTCAAGGCTTCTTCCAGGCACGTTTTAGTACAAAGCAAAAACGACTTATGAAACTTCAT
AATTTCGATCTTCAGAGGTATAATGAGCTCCGGAGAGCTCACTATCCTCAATCATCGATT
GCCAATTAA