Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400074816
CDS Infomation

pacid=37469945 polypeptide=PGSC0003DMP400050674 locus=PGSC0003DMG400029090 ID=PGSC0003DMT400074816.v4.03 annot-version=v4.03
Sequence

ATGGAGAAACCAAAAACTCCCTTCAAGGGAGTCATTGATGATGTTAAAGGAAGGATGGCA
TGCTATAAACGCGATTGGCTCGACTCATGTGGTACAGGCGTGAGGATATTGGCTCCAACA
GCATACATTTTCTTTGCTTCAGCTCTTCCTGTTATTGCTTTCGGGGAGCAATTGAGTAGA
GAAACAGACGGAGCTATGAGCACAGTTGAAACTCTTGCTTCTACTGCTATCTGTGGAATC
ATCCATTCAATTTTTGGTGGACAACCTCTCTTGATCTTAGGAGTTGCAGAGCCAACCATC
ATCATGTACACCTACTTGTACAATTTTGTGAAGGATAGACCAGAAATGGGGCCAAAGCTG
TTTGTCGCCTGGGCAGGATGGGTTTGTGTGTGGACCGCGTTGATGTTGTTTCTTCTTGCT
ATATTCAACGCTTGCAATATCATCCCTAGGTTTACGAGGCTTGCAGGGGAACTCTTTGGC
ATGTTAATCACAGTTCTTTTCCTCCAAGAGGCTATAAAGGGAGTAGTGAGTGAATTTTCA
ATTCCAAAAGGTGAAAATCCGGAACGAGAGGAGTTCCACTTTGAATGGCTCTACACAAAT
GGGTTACTGGCAGTTATTTTCTCGTTTGGTGTTCTTTTAGCTTCTCTTAAAAGTAGAGGA
GCTAGATCATGGCGTTATGGTACAGGTTGGATGCGAAGTTTTATAGCCGATTATGGGGTT
CCCCTTATGGTTGTGTTGTGGACAGCAATGTCTTTCGGTGTGCCTGGAAAAATTCCTTCT
GAAGTTCCTCGAAGGCTCTTTTGTCCTCTCCCTTGGGAGGCTAAATCATTATACCACTGG
ACTGTGATGAAGGATATGGTAAGGGTCCCGGTGTTGTATATCTTTGCTGCCTTCATTCCA
GCTCTGATGATAGCTGGTCTATACTTTTTCGATCATAGTGTTGCTGCACAGATGGCACAA
CAGAACGAGTTCAATCTTAAAAACCCATCTGCTTACCATTATGATTTGTTTTTGCTTGGA
GTCATGACTTTGATATGCGGATTACTTGGGATTCCCCCTTCAAATGGGGTACTTCCGCAA
TCACCAATGCATACAAGGAGCCTTGCTGTACTCAAGAGACAGTTAATTCGGAAGAAAATG
GTGAAGAGTGCGAAGGAAGGTATTAAGCAGAATGCAACAAAATCAGAGATATATGGAAAG
ATGCATGCCGTCTTCGTTGAGATGGATGCTACATCAAAGCGCACAGCAGATAAGGATTTG
GAGAACTTGAAGGCAGCTGTAATGAAACATGACGATGGAGAAAATGGAACAGACGGAAAA
TTTGACCCTGAGAAGCACATTGATGCACACTTGCCTGTCCGAGTAAATGAGCAAAGAGTT
AGCAACTTTTTGCAATCTCTACTTGTGGGATGTAGTGTGTTTGCTATACCTGTGATCCGG
AGGATACCCACCTCAGTTCTTTGGGGATATTTTGCCTACATGGCCATTGACAGTCTCCCT
GGTAATCAATTCTGGGAGAGGCTGCTGCTGCTTTTAATTCCTTCGGGTAGAAGATTCAAA
GTCTTTGAAGGGCTCCATGCCTCCTATGTTGCGTCGGTCCCATTCAAATACATTGTCAAG
TTTACAATGCTCCAGTTCGTGTATTTCTTAATTTGCTTTGGAGTAACATGGATACCTATC
GCTGGAATACTATTCCCTGTGCTTTTCTTCCTTCTCATAGCTATAAGAGAGCATGTTCTT
CCCAAGTTTTTCCCATACGAGTATCTTAAGGAATTAGATGCAGCTGAGTACGAAGAAATT
GCTGGTGTTCCTAAGGAGAGAGAGATATCTGATGAAGAAAATGATGATGATTTCTCTGAT
TCTGAGATATTGGATGAGATGACAACACACAGAGGTGAACTAAAACATAGATCTGTCAGC
CTAACCGAAAGGCAACATCAGGTTTATCCACACGACGCTTCTGAAATGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400050674
PEP Infomation

pacid=37469945 transcript=PGSC0003DMT400074816 locus=PGSC0003DMG400029090 ID=PGSC0003DMT400074816.v4.03 annot-version=v4.03
Sequence

MEKPKTPFKGVIDDVKGRMACYKRDWLDSCGTGVRILAPTAYIFFASALPVIAFGEQLSR
ETDGAMSTVETLASTAICGIIHSIFGGQPLLILGVAEPTIIMYTYLYNFVKDRPEMGPKL
FVAWAGWVCVWTALMLFLLAIFNACNIIPRFTRLAGELFGMLITVLFLQEAIKGVVSEFS
IPKGENPEREEFHFEWLYTNGLLAVIFSFGVLLASLKSRGARSWRYGTGWMRSFIADYGV
PLMVVLWTAMSFGVPGKIPSEVPRRLFCPLPWEAKSLYHWTVMKDMVRVPVLYIFAAFIP
ALMIAGLYFFDHSVAAQMAQQNEFNLKNPSAYHYDLFLLGVMTLICGLLGIPPSNGVLPQ
SPMHTRSLAVLKRQLIRKKMVKSAKEGIKQNATKSEIYGKMHAVFVEMDATSKRTADKDL
ENLKAAVMKHDDGENGTDGKFDPEKHIDAHLPVRVNEQRVSNFLQSLLVGCSVFAIPVIR
RIPTSVLWGYFAYMAIDSLPGNQFWERLLLLLIPSGRRFKVFEGLHASYVASVPFKYIVK
FTMLQFVYFLICFGVTWIPIAGILFPVLFFLLIAIREHVLPKFFPYEYLKELDAAEYEEI
AGVPKEREISDEENDDDFSDSEILDEMTTHRGELKHRSVSLTERQHQVYPHDASEM*

Transcript Sequence

Transcript ID

PGSC0003DMT400074816
Transcript Infomation

pacid=37469945 locus=PGSC0003DMG400029090 ID=PGSC0003DMT400074816.v4.03 annot-version=v4.03
Sequence

ATGGAGAAACCAAAAACTCCCTTCAAGGGAGTCATTGATGATGTTAAAGGAAGGATGGCA
TGCTATAAACGCGATTGGCTCGACTCATGTGGTACAGGCGTGAGGATATTGGCTCCAACA
GCATACATTTTCTTTGCTTCAGCTCTTCCTGTTATTGCTTTCGGGGAGCAATTGAGTAGA
GAAACAGACGGAGCTATGAGCACAGTTGAAACTCTTGCTTCTACTGCTATCTGTGGAATC
ATCCATTCAATTTTTGGTGGACAACCTCTCTTGATCTTAGGAGTTGCAGAGCCAACCATC
ATCATGTACACCTACTTGTACAATTTTGTGAAGGATAGACCAGAAATGGGGCCAAAGCTG
TTTGTCGCCTGGGCAGGATGGGTTTGTGTGTGGACCGCGTTGATGTTGTTTCTTCTTGCT
ATATTCAACGCTTGCAATATCATCCCTAGGTTTACGAGGCTTGCAGGGGAACTCTTTGGC
ATGTTAATCACAGTTCTTTTCCTCCAAGAGGCTATAAAGGGAGTAGTGAGTGAATTTTCA
ATTCCAAAAGGTGAAAATCCGGAACGAGAGGAGTTCCACTTTGAATGGCTCTACACAAAT
GGGTTACTGGCAGTTATTTTCTCGTTTGGTGTTCTTTTAGCTTCTCTTAAAAGTAGAGGA
GCTAGATCATGGCGTTATGGTACAGGTTGGATGCGAAGTTTTATAGCCGATTATGGGGTT
CCCCTTATGGTTGTGTTGTGGACAGCAATGTCTTTCGGTGTGCCTGGAAAAATTCCTTCT
GAAGTTCCTCGAAGGCTCTTTTGTCCTCTCCCTTGGGAGGCTAAATCATTATACCACTGG
ACTGTGATGAAGGATATGGTAAGGGTCCCGGTGTTGTATATCTTTGCTGCCTTCATTCCA
GCTCTGATGATAGCTGGTCTATACTTTTTCGATCATAGTGTTGCTGCACAGATGGCACAA
CAGAACGAGTTCAATCTTAAAAACCCATCTGCTTACCATTATGATTTGTTTTTGCTTGGA
GTCATGACTTTGATATGCGGATTACTTGGGATTCCCCCTTCAAATGGGGTACTTCCGCAA
TCACCAATGCATACAAGGAGCCTTGCTGTACTCAAGAGACAGTTAATTCGGAAGAAAATG
GTGAAGAGTGCGAAGGAAGGTATTAAGCAGAATGCAACAAAATCAGAGATATATGGAAAG
ATGCATGCCGTCTTCGTTGAGATGGATGCTACATCAAAGCGCACAGCAGATAAGGATTTG
GAGAACTTGAAGGCAGCTGTAATGAAACATGACGATGGAGAAAATGGAACAGACGGAAAA
TTTGACCCTGAGAAGCACATTGATGCACACTTGCCTGTCCGAGTAAATGAGCAAAGAGTT
AGCAACTTTTTGCAATCTCTACTTGTGGGATGTAGTGTGTTTGCTATACCTGTGATCCGG
AGGATACCCACCTCAGTTCTTTGGGGATATTTTGCCTACATGGCCATTGACAGTCTCCCT
GGTAATCAATTCTGGGAGAGGCTGCTGCTGCTTTTAATTCCTTCGGGTAGAAGATTCAAA
GTCTTTGAAGGGCTCCATGCCTCCTATGTTGCGTCGGTCCCATTCAAATACATTGTCAAG
TTTACAATGCTCCAGTTCGTGTATTTCTTAATTTGCTTTGGAGTAACATGGATACCTATC
GCTGGAATACTATTCCCTGTGCTTTTCTTCCTTCTCATAGCTATAAGAGAGCATGTTCTT
CCCAAGTTTTTCCCATACGAGTATCTTAAGGAATTAGATGCAGCTGAGTACGAAGAAATT
GCTGGTGTTCCTAAGGAGAGAGAGATATCTGATGAAGAAAATGATGATGATTTCTCTGAT
TCTGAGATATTGGATGAGATGACAACACACAGAGGTGAACTAAAACATAGATCTGTCAGC
CTAACCGAAAGGCAACATCAGGTTTATCCACACGACGCTTCTGAAATGTAA