Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400074811
CDS Infomation

pacid=37471090 polypeptide=PGSC0003DMP400050669 locus=PGSC0003DMG400029088 ID=PGSC0003DMT400074811.v4.03 annot-version=v4.03
Sequence

ATGCTTCTTTCACTACCCTTTAAAGCACAACACACGCCTTGTAGAATTCCTTTCATCATT
TCTGTTATTCTAAAAAAAAAACATATTCTTAGATCTCTCATACAGAAGAAGAAGAAGAAA
GAAGGCGAGATAATGCTAAAGAGGCAAGATTCATTAGTGGCATCAGCTCGCCGGCAAAGG
ACACCGCCGGGTGGAGAAAATCAGCATGTTGTGAAGTCTACTGGTTGCATGTCAGGCATT
ATTCAACTAATTTCCAAATACCAAAAAAAGACGAAACGCATTACTTCTGGAATTAGAAAG
CAAGGTAAATTAGTAGTAGTAGTAATTGGGGAAAATGAAAAAAATGATGAGGCAAAGGTA
CCAAAAATCGAAGCAGATAAAAAGGAGCGGCCAGTAGCGTTAGTGGCACGGCTAATGGGG
CTGGAGGAAATAAAGTGCCTTCCGAGCCCTAATAGGAAGTCGAGTACAGAAGAGGTAAAG
AGAAGGAAGCTTCTAGAAGACTTGGGCAAGTGCAATGACGATTTAGAGTCTATTCGCCAG
ATTCTAAACTCGCTGAAAAGGGATAAGCAAATTGGCGATGCAGTGAAGCCGCAGACTCCA
TTAACATTGTGCAACAAAATCGCCAAACCTAAACATAATCATAATGGGCATATTACACAA
CAAAGGATCAAGAGGCTAGAAGCATATGAACCAATTGATAAATTTACAAATAATGCACCA
TTATTTCACGTGAAGCCAAAGTCATGTAGCAAAGGCATGATTCAAAGTGTAGAGGAAGTG
TGGAATGAGAGTGAATGGGGAGAAAAGAGAGAGGCTGGGAGAATAGGGCTAATCTTACAA
GATCAAATTTGCAGGGACTTAATTGAAGAGTTCCTCAAAGAAATGAATCTACTAATTTCC
TATCGTTCTTTACCCTTTTTAGCATGTAAGAAAAGGCTTTTCTTCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400050669
PEP Infomation

pacid=37471090 transcript=PGSC0003DMT400074811 locus=PGSC0003DMG400029088 ID=PGSC0003DMT400074811.v4.03 annot-version=v4.03
Sequence

MLLSLPFKAQHTPCRIPFIISVILKKKHILRSLIQKKKKKEGEIMLKRQDSLVASARRQR
TPPGGENQHVVKSTGCMSGIIQLISKYQKKTKRITSGIRKQGKLVVVVIGENEKNDEAKV
PKIEADKKERPVALVARLMGLEEIKCLPSPNRKSSTEEVKRRKLLEDLGKCNDDLESIRQ
ILNSLKRDKQIGDAVKPQTPLTLCNKIAKPKHNHNGHITQQRIKRLEAYEPIDKFTNNAP
LFHVKPKSCSKGMIQSVEEVWNESEWGEKREAGRIGLILQDQICRDLIEEFLKEMNLLIS
YRSLPFLACKKRLFF*

Transcript Sequence

Transcript ID

PGSC0003DMT400074811
Transcript Infomation

pacid=37471090 locus=PGSC0003DMG400029088 ID=PGSC0003DMT400074811.v4.03 annot-version=v4.03
Sequence

ATGCTTCTTTCACTACCCTTTAAAGCACAACACACGCCTTGTAGAATTCCTTTCATCATT
TCTGTTATTCTAAAAAAAAAACATATTCTTAGATCTCTCATACAGAAGAAGAAGAAGAAA
GAAGGCGAGATAATGCTAAAGAGGCAAGATTCATTAGTGGCATCAGCTCGCCGGCAAAGG
ACACCGCCGGGTGGAGAAAATCAGCATGTTGTGAAGTCTACTGGTTGCATGTCAGGCATT
ATTCAACTAATTTCCAAATACCAAAAAAAGACGAAACGCATTACTTCTGGAATTAGAAAG
CAAGGTAAATTAGTAGTAGTAGTAATTGGGGAAAATGAAAAAAATGATGAGGCAAAGGTA
CCAAAAATCGAAGCAGATAAAAAGGAGCGGCCAGTAGCGTTAGTGGCACGGCTAATGGGG
CTGGAGGAAATAAAGTGCCTTCCGAGCCCTAATAGGAAGTCGAGTACAGAAGAGGTAAAG
AGAAGGAAGCTTCTAGAAGACTTGGGCAAGTGCAATGACGATTTAGAGTCTATTCGCCAG
ATTCTAAACTCGCTGAAAAGGGATAAGCAAATTGGCGATGCAGTGAAGCCGCAGACTCCA
TTAACATTGTGCAACAAAATCGCCAAACCTAAACATAATCATAATGGGCATATTACACAA
CAAAGGATCAAGAGGCTAGAAGCATATGAACCAATTGATAAATTTACAAATAATGCACCA
TTATTTCACGTGAAGCCAAAGTCATGTAGCAAAGGCATGATTCAAAGTGTAGAGGAAGTG
TGGAATGAGAGTGAATGGGGAGAAAAGAGAGAGGCTGGGAGAATAGGGCTAATCTTACAA
GATCAAATTTGCAGGGACTTAATTGAAGAGTTCCTCAAAGAAATGAATCTACTAATTTCC
TATCGTTCTTTACCCTTTTTAGCATGTAAGAAAAGGCTTTTCTTCTAA