Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400074806
CDS Infomation

pacid=37469333 polypeptide=PGSC0003DMP400050666 locus=PGSC0003DMG400029086 ID=PGSC0003DMT400074806.v4.03 annot-version=v4.03
Sequence

ATGAAGAGCTCAACAACAGTAATACTGCTGCTCGTGCTATTGTGCGCCGTTTCCAACATT
TCCTTTGCCGTTATTGATGGATTGTTAAAGAATGGAAACTTCGAAATACCCCCATCGAAA
GCGGACTTAAACGGCACGGAGGTTCTAAAGCACAATGCCATACCGGAATGGTCAATTTCC
GGGTTCGTAGAGTACATAAAAGCTGGCCAAAAACAAGGTGATATGCTTCTAGTCGTACCC
GAGGGCTACGCCGCGGTTCGTCTAGGTAACGAAGCATCGATCAAGCAAATATTGAACGTT
ACAAAAGGAATGTACTATTCCTTAACGTTCAGTGCTGCTAGAACTTGTGCTCAAGAGGAA
CGCATCAACGTATCTGTTACACCTGATTTCGGAGTACTGCCTATCCAAACATTGTATAGT
AGCAGTGGTTGGGACTCATATGCTTGGGCATTTCAAGCTGAACTTCACCAAGTTGAGATC
TTGCTTCATAATCCAGGTGTTGAGGAAGATCCTGCTTGTGGTCCTCTCATCGATTCGATC
GCCATTCGTACTTTATATCCTCCTAGGGCCACTAATCAGAATTTGTTGAAAAATGGAGAT
TTTGAAGAGGGTCCATACATATTCCCAAACACAAGTTGGGGAGTACTTGTACCACCAAAC
ATTGAAGATGACCATTCCCCATTGCCAGCATGGATGGTTGAGTCCCTAAAGGCAGTGAAA
TACTTAGACTCTGACCATTTTTCAGTACCACATGGCAAGAGAGCCATAGAGTTAGTTGCT
GGTAAAGAAAGTGCCATTGCTCAAGTTGCAAGAACCACAATTGGCAAAATGTATCAACTT
AGTTTCAAAGTTGGAGATGCAAGTAATGCTTGTGAAGGTTCTATGATTGTTGAGGCCTTT
GCTGGAAGGGATACACTTAAAGTCCCTTACGAGTCTATGGGAAAAGGTGGTTATAAGCGC
GCTATCCTCCGTTTCAAGGCCACTGCTAGCCGGACTAGGATCATGTTCCTTAGCACCTAC
TATCACACGAGAAGCGATGATTTTGTTTCCTTGTGTGGCCCTGTGGTCGATGATGTGACT
CTCTTGAGTGTCAGGACCCATCGTCGAGTCCTCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400050666
PEP Infomation

pacid=37469333 transcript=PGSC0003DMT400074806 locus=PGSC0003DMG400029086 ID=PGSC0003DMT400074806.v4.03 annot-version=v4.03
Sequence

MKSSTTVILLLVLLCAVSNISFAVIDGLLKNGNFEIPPSKADLNGTEVLKHNAIPEWSIS
GFVEYIKAGQKQGDMLLVVPEGYAAVRLGNEASIKQILNVTKGMYYSLTFSAARTCAQEE
RINVSVTPDFGVLPIQTLYSSSGWDSYAWAFQAELHQVEILLHNPGVEEDPACGPLIDSI
AIRTLYPPRATNQNLLKNGDFEEGPYIFPNTSWGVLVPPNIEDDHSPLPAWMVESLKAVK
YLDSDHFSVPHGKRAIELVAGKESAIAQVARTTIGKMYQLSFKVGDASNACEGSMIVEAF
AGRDTLKVPYESMGKGGYKRAILRFKATASRTRIMFLSTYYHTRSDDFVSLCGPVVDDVT
LLSVRTHRRVL*

Transcript Sequence

Transcript ID

PGSC0003DMT400074806
Transcript Infomation

pacid=37469333 locus=PGSC0003DMG400029086 ID=PGSC0003DMT400074806.v4.03 annot-version=v4.03
Sequence

ATGAAGAGCTCAACAACAGTAATACTGCTGCTCGTGCTATTGTGCGCCGTTTCCAACATT
TCCTTTGCCGTTATTGATGGATTGTTAAAGAATGGAAACTTCGAAATACCCCCATCGAAA
GCGGACTTAAACGGCACGGAGGTTCTAAAGCACAATGCCATACCGGAATGGTCAATTTCC
GGGTTCGTAGAGTACATAAAAGCTGGCCAAAAACAAGGTGATATGCTTCTAGTCGTACCC
GAGGGCTACGCCGCGGTTCGTCTAGGTAACGAAGCATCGATCAAGCAAATATTGAACGTT
ACAAAAGGAATGTACTATTCCTTAACGTTCAGTGCTGCTAGAACTTGTGCTCAAGAGGAA
CGCATCAACGTATCTGTTACACCTGATTTCGGAGTACTGCCTATCCAAACATTGTATAGT
AGCAGTGGTTGGGACTCATATGCTTGGGCATTTCAAGCTGAACTTCACCAAGTTGAGATC
TTGCTTCATAATCCAGGTGTTGAGGAAGATCCTGCTTGTGGTCCTCTCATCGATTCGATC
GCCATTCGTACTTTATATCCTCCTAGGGCCACTAATCAGAATTTGTTGAAAAATGGAGAT
TTTGAAGAGGGTCCATACATATTCCCAAACACAAGTTGGGGAGTACTTGTACCACCAAAC
ATTGAAGATGACCATTCCCCATTGCCAGCATGGATGGTTGAGTCCCTAAAGGCAGTGAAA
TACTTAGACTCTGACCATTTTTCAGTACCACATGGCAAGAGAGCCATAGAGTTAGTTGCT
GGTAAAGAAAGTGCCATTGCTCAAGTTGCAAGAACCACAATTGGCAAAATGTATCAACTT
AGTTTCAAAGTTGGAGATGCAAGTAATGCTTGTGAAGGTTCTATGATTGTTGAGGCCTTT
GCTGGAAGGGATACACTTAAAGTCCCTTACGAGTCTATGGGAAAAGGTGGTTATAAGCGC
GCTATCCTCCGTTTCAAGGCCACTGCTAGCCGGACTAGGATCATGTTCCTTAGCACCTAC
TATCACACGAGAAGCGATGATTTTGTTTCCTTGTGTGGCCCTGTGGTCGATGATGTGACT
CTCTTGAGTGTCAGGACCCATCGTCGAGTCCTCTAA