Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400074768
CDS Infomation

pacid=37452681 polypeptide=PGSC0003DMP400050642 locus=PGSC0003DMG400029075 ID=PGSC0003DMT400074768.v4.03 annot-version=v4.03
Sequence

ATGGTGAAAAATGGAAATGCATTGATGCAAAAATATGAATTGGGGAGATTATTAGGTCAA
GGCAACTTTGGTAAGGTTTATTATGGAAGGAATCTGGAAAGCGGACAGACTGTAGCCATT
AAAGTAATTGATAAAGAGAAGGTTCAGAAAGCTGGACTGACTGAACAGACGAAACGAGAG
ATATCTGTTATGGCATTGGTCAAACATCCACATGTTGTGCAGCTATACGAGGTCATGGCA
ACTAAGAGTAAGATTTACTTTGTGATCGAACATGCCAAAGGTGGCGAGCTTTTCAACAAA
CTGACAAAGGGGAGGCTCAAGGAAGATGTTGCTAGAAAGTTGTTTCAGCAACTGATCAAC
GCAGTTGAATTTTGCCACAGCCGAGATGTTTATCACCGTGATCTCAAACCAGAAAATCTC
CTACTGGATGAGAATGGAAACCTAAAGGTCTCAGACTTTGGTTTGAGTGCATTAGCTGAG
TCTAAGCGGCAAGATGGGTTACTCCACACAACCTGTGGTACACCAGCATATGTTGCTCCT
GAGGTGATTAGTAGAAAAGGATATGAAGGTGTCAAAGCTGACATCTGGTCTTGTGGGGTG
ATTTTATTTGTCTTGTTGGCTGGTTATCTTCCATTTTATGACTCAAATCTTATGAATCTG
TATAGGAAGATATGCAGGGCAGAGTACAAATGCCCTCATTGGTTCCCTCTAGAAGTGCGT
AAACTTCTCTCTAGGATCCTCGACCCAAACCCTCATAAAAGGATTTCAATAGGCAAAATC
AAGGAAAGCTCCTGGTTTAAGAAAGGATTGGGATCTACACATGTGGGAACTAAACAAGTA
GTGAACCAAAATGTTATTGCAGATGGTGATGCTGTTTCCAGTTCAAATTCGGAGAGTAGT
ACCTCTTCCTCCGACACCAAGTTAGAGTTGATGAAACCTGCAATCTTTAGTGCATTTCAT
ATCCTCTGCTGGTTTAATTTGTCTGGTTTATTCATAAACAATGATCAAAAGGAGGAGCTG
CGATTCACATCAGTGAAGCCTGCCCCAGTCATCATGTCCAAGCTTGTGGAAGTTGGCAGG
AGTCTGAACCTTGAAATAAAGAAGAAAGAGGGTGGATTTCTTAGATTAGAGGGATTAAAT
GAGAGCAGATATGAAACTCTGTGCATTGACGTGCAAATATTTGAAATATCTGAATCCCAT
TATTACTTCATTGAGCTGAGTAGGTCAAGTGGTGATGCGATTGATTACCAAAACATGTTG
ACGCAAACTATCAGACCAGCTCTTGAGGAAATTGTTCTGGCTTGGCAAGGTGTGCAATCT
CATCAACAATAG

Peptide Sequence

PEP ID

PGSC0003DMP400050642
PEP Infomation

pacid=37452681 transcript=PGSC0003DMT400074768 locus=PGSC0003DMG400029075 ID=PGSC0003DMT400074768.v4.03 annot-version=v4.03
Sequence

MVKNGNALMQKYELGRLLGQGNFGKVYYGRNLESGQTVAIKVIDKEKVQKAGLTEQTKRE
ISVMALVKHPHVVQLYEVMATKSKIYFVIEHAKGGELFNKLTKGRLKEDVARKLFQQLIN
AVEFCHSRDVYHRDLKPENLLLDENGNLKVSDFGLSALAESKRQDGLLHTTCGTPAYVAP
EVISRKGYEGVKADIWSCGVILFVLLAGYLPFYDSNLMNLYRKICRAEYKCPHWFPLEVR
KLLSRILDPNPHKRISIGKIKESSWFKKGLGSTHVGTKQVVNQNVIADGDAVSSSNSESS
TSSSDTKLELMKPAIFSAFHILCWFNLSGLFINNDQKEELRFTSVKPAPVIMSKLVEVGR
SLNLEIKKKEGGFLRLEGLNESRYETLCIDVQIFEISESHYYFIELSRSSGDAIDYQNML
TQTIRPALEEIVLAWQGVQSHQQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400074768
Transcript Infomation

pacid=37452681 locus=PGSC0003DMG400029075 ID=PGSC0003DMT400074768.v4.03 annot-version=v4.03
Sequence

ATGGTGAAAAATGGAAATGCATTGATGCAAAAATATGAATTGGGGAGATTATTAGGTCAA
GGCAACTTTGGTAAGGTTTATTATGGAAGGAATCTGGAAAGCGGACAGACTGTAGCCATT
AAAGTAATTGATAAAGAGAAGGTTCAGAAAGCTGGACTGACTGAACAGACGAAACGAGAG
ATATCTGTTATGGCATTGGTCAAACATCCACATGTTGTGCAGCTATACGAGGTCATGGCA
ACTAAGAGTAAGATTTACTTTGTGATCGAACATGCCAAAGGTGGCGAGCTTTTCAACAAA
CTGACAAAGGGGAGGCTCAAGGAAGATGTTGCTAGAAAGTTGTTTCAGCAACTGATCAAC
GCAGTTGAATTTTGCCACAGCCGAGATGTTTATCACCGTGATCTCAAACCAGAAAATCTC
CTACTGGATGAGAATGGAAACCTAAAGGTCTCAGACTTTGGTTTGAGTGCATTAGCTGAG
TCTAAGCGGCAAGATGGGTTACTCCACACAACCTGTGGTACACCAGCATATGTTGCTCCT
GAGGTGATTAGTAGAAAAGGATATGAAGGTGTCAAAGCTGACATCTGGTCTTGTGGGGTG
ATTTTATTTGTCTTGTTGGCTGGTTATCTTCCATTTTATGACTCAAATCTTATGAATCTG
TATAGGAAGATATGCAGGGCAGAGTACAAATGCCCTCATTGGTTCCCTCTAGAAGTGCGT
AAACTTCTCTCTAGGATCCTCGACCCAAACCCTCATAAAAGGATTTCAATAGGCAAAATC
AAGGAAAGCTCCTGGTTTAAGAAAGGATTGGGATCTACACATGTGGGAACTAAACAAGTA
GTGAACCAAAATGTTATTGCAGATGGTGATGCTGTTTCCAGTTCAAATTCGGAGAGTAGT
ACCTCTTCCTCCGACACCAAGTTAGAGTTGATGAAACCTGCAATCTTTAGTGCATTTCAT
ATCCTCTGCTGGTTTAATTTGTCTGGTTTATTCATAAACAATGATCAAAAGGAGGAGCTG
CGATTCACATCAGTGAAGCCTGCCCCAGTCATCATGTCCAAGCTTGTGGAAGTTGGCAGG
AGTCTGAACCTTGAAATAAAGAAGAAAGAGGGTGGATTTCTTAGATTAGAGGGATTAAAT
GAGAGCAGATATGAAACTCTGTGCATTGACGTGCAAATATTTGAAATATCTGAATCCCAT
TATTACTTCATTGAGCTGAGTAGGTCAAGTGGTGATGCGATTGATTACCAAAACATGTTG
ACGCAAACTATCAGACCAGCTCTTGAGGAAATTGTTCTGGCTTGGCAAGGTGTGCAATCT
CATCAACAATAG