Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400074709
CDS Infomation

pacid=37467839 polypeptide=PGSC0003DMP400050606 locus=PGSC0003DMG400029046 ID=PGSC0003DMT400074709.v4.03 annot-version=v4.03
Sequence

ATGACACCTAGAAGTTTAGCGCGACGAAGATTGTTTCCGAATGTGGAGAACAAGAAACAG
AAGGTGGAACAATCAGGCGCAGGGCCAAGGAAGAACTTACAACTTGAAGTGATGGAGCCT
GGATTGAAGAATGATGGTCCCTCTCTGGACACTATCTTGGTCAATTATTTGGACACACTA
AAACAACGAGTCAATTTTCATTTAGGTTATCCAGTCAACATATGTTATGATCACTATGCA
ACTTTAGCACCACTTTTGCAGTTTCACTTAAACAATTGTGGTGATCCTTTTCTTCAAAAC
ACTGTCGATTTCCATTCAAAAGACTTTGAAGTGGCAGTTTTGGATTGGTTTGCACAACTC
TGGGAAATTGAAAAGGATCAATATTGGGGTTATGTTACCAATGGTGGCACTGAAGGCAAT
CTCCATGGAATTTTGTTAGGGAGAGAGCTACTTCCCGAGGGGATATTATATGCATCGAAA
GACTCTCATTACTCAGTCTTCAAAGCTGCAAGAATGTACAGAATGGATTCAGAAACAATC
AACACATCAGTAAATGGAGAGATGGATTATTCAGATTTAAGAGCAAAGTTACTTCAAAAT
AAAGACAGACCAGCAATTATAAATGTCACAATTGGGACTACCTTTAAAGGAGCTATTGAT
GATGTTGATGTTATTCTTGAAACACTCAAAGATTGTGGCTATTCACAAGATAGGTTTTAC
ATCCATTGTGATGCAGCACTATGTGGTCTTATGACCCCTTTTATAAACAATATGATTAGT
TTCAAGAAGCCAATTGGAAGTGTCACAATTTCTGGTCACAAGTTCTTAGGATGCCCAATG
CCTTGTGGTGTCCAAATAACAAGAAAAAGCTACATCAATAATCTCTCAACAAATGTGGAG
TACATTGCTTCTGTGGATGCCACTATTTCTGGTAGCCGTAACGGTTTAACTCCAATTTTC
TTGTGGTATAGCTTGAGCGCAAAAGGACAAATTGGCCTGCAAAAGGATGTTAAAAAATGT
CTTGACAATGCCAAATATTTGAAAGATCGTCTTCAACAAGCAGGGATAAGTGTCATGCTG
AATGAGCTTAGCATCATAGTTGTACTTGAAAGGCCTCGTGACCATGAATTTGTCCGACGT
TGGCAACTTTCATGCGTCAAAGATATGGCACATGTTATTGTTATGCCAGGCATCACACGA
GAAATGCTTGACAATTTCATCAGTGAATTAGTGCAACAAAGAAAACAATGGTACAAAGAC
GGAAAAGCAGAAGCTCCTTGTGTTGGAGAGGATATTGGTGCTCAAAATTGTGCATGCTCT
TACCATAAGATTGACTACATTAGTCCTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400050606
PEP Infomation

pacid=37467839 transcript=PGSC0003DMT400074709 locus=PGSC0003DMG400029046 ID=PGSC0003DMT400074709.v4.03 annot-version=v4.03
Sequence

MTPRSLARRRLFPNVENKKQKVEQSGAGPRKNLQLEVMEPGLKNDGPSLDTILVNYLDTL
KQRVNFHLGYPVNICYDHYATLAPLLQFHLNNCGDPFLQNTVDFHSKDFEVAVLDWFAQL
WEIEKDQYWGYVTNGGTEGNLHGILLGRELLPEGILYASKDSHYSVFKAARMYRMDSETI
NTSVNGEMDYSDLRAKLLQNKDRPAIINVTIGTTFKGAIDDVDVILETLKDCGYSQDRFY
IHCDAALCGLMTPFINNMISFKKPIGSVTISGHKFLGCPMPCGVQITRKSYINNLSTNVE
YIASVDATISGSRNGLTPIFLWYSLSAKGQIGLQKDVKKCLDNAKYLKDRLQQAGISVML
NELSIIVVLERPRDHEFVRRWQLSCVKDMAHVIVMPGITREMLDNFISELVQQRKQWYKD
GKAEAPCVGEDIGAQNCACSYHKIDYISP*

Transcript Sequence

Transcript ID

PGSC0003DMT400074709
Transcript Infomation

pacid=37467839 locus=PGSC0003DMG400029046 ID=PGSC0003DMT400074709.v4.03 annot-version=v4.03
Sequence

ATGACACCTAGAAGTTTAGCGCGACGAAGATTGTTTCCGAATGTGGAGAACAAGAAACAG
AAGGTGGAACAATCAGGCGCAGGGCCAAGGAAGAACTTACAACTTGAAGTGATGGAGCCT
GGATTGAAGAATGATGGTCCCTCTCTGGACACTATCTTGGTCAATTATTTGGACACACTA
AAACAACGAGTCAATTTTCATTTAGGTTATCCAGTCAACATATGTTATGATCACTATGCA
ACTTTAGCACCACTTTTGCAGTTTCACTTAAACAATTGTGGTGATCCTTTTCTTCAAAAC
ACTGTCGATTTCCATTCAAAAGACTTTGAAGTGGCAGTTTTGGATTGGTTTGCACAACTC
TGGGAAATTGAAAAGGATCAATATTGGGGTTATGTTACCAATGGTGGCACTGAAGGCAAT
CTCCATGGAATTTTGTTAGGGAGAGAGCTACTTCCCGAGGGGATATTATATGCATCGAAA
GACTCTCATTACTCAGTCTTCAAAGCTGCAAGAATGTACAGAATGGATTCAGAAACAATC
AACACATCAGTAAATGGAGAGATGGATTATTCAGATTTAAGAGCAAAGTTACTTCAAAAT
AAAGACAGACCAGCAATTATAAATGTCACAATTGGGACTACCTTTAAAGGAGCTATTGAT
GATGTTGATGTTATTCTTGAAACACTCAAAGATTGTGGCTATTCACAAGATAGGTTTTAC
ATCCATTGTGATGCAGCACTATGTGGTCTTATGACCCCTTTTATAAACAATATGATTAGT
TTCAAGAAGCCAATTGGAAGTGTCACAATTTCTGGTCACAAGTTCTTAGGATGCCCAATG
CCTTGTGGTGTCCAAATAACAAGAAAAAGCTACATCAATAATCTCTCAACAAATGTGGAG
TACATTGCTTCTGTGGATGCCACTATTTCTGGTAGCCGTAACGGTTTAACTCCAATTTTC
TTGTGGTATAGCTTGAGCGCAAAAGGACAAATTGGCCTGCAAAAGGATGTTAAAAAATGT
CTTGACAATGCCAAATATTTGAAAGATCGTCTTCAACAAGCAGGGATAAGTGTCATGCTG
AATGAGCTTAGCATCATAGTTGTACTTGAAAGGCCTCGTGACCATGAATTTGTCCGACGT
TGGCAACTTTCATGCGTCAAAGATATGGCACATGTTATTGTTATGCCAGGCATCACACGA
GAAATGCTTGACAATTTCATCAGTGAATTAGTGCAACAAAGAAAACAATGGTACAAAGAC
GGAAAAGCAGAAGCTCCTTGTGTTGGAGAGGATATTGGTGCTCAAAATTGTGCATGCTCT
TACCATAAGATTGACTACATTAGTCCTTAG