Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400074587
CDS Infomation

pacid=37474212 polypeptide=PGSC0003DMP400050523 locus=PGSC0003DMG400028998 ID=PGSC0003DMT400074587.v4.03 annot-version=v4.03
Sequence

ATGGCACCCATTGACCCTCATTCCTTCACTGATTCAACTCACCCACTCACAACCCATATC
TCCCTCACTTTTTACTTCGATTTTCCATCTTCCACCATCTCCTCTGCTACTCTTCTCTCC
TTTTCTACTCCTTACACTGGACCCCTCACTCTTGACACTCGCTCACTCTCTGTCTCTTAT
GTACTCGACCCTCTTTCCCTTTCCCCCTTACCTTTCTCCCTTTCTCCTACAGACCCAATT
CTTGGACAATCACTCAACATTTCGATTTCTAAACAAACCCATCAAATCTTGATTCTTTCC
AAAACTAGTCCTTCAAGTTCAGCTCTTCAATGGCTTTCGCCTACTCAAACTTTCAACAAG
AATCATCCTTTTCTGTATACCCATTGTCAGCCCATTCATGCCCGTTCAATTTTTCCTTGT
CAGGATACACCTGTTGCACGGGTTAAGTACACTGCGAAATTGAACATCCCGAGAGAGCTG
TCGGCGGTTATGGCTGCTAGACATGTGGAGAGGCGGGACCCGATTCCGTCTGAGGCGCAA
GGGGTTTGTGAGGATTCGGTTTGGTGTGGGGATGATAGGGTGGTGGAGGAATTTGTGATG
GAACAGCCTATACCTCCTTATTTATTTGCATTTGCAATTGGGGAGTTGGGGTTTAGGGAG
GTGGGACCTAGGACTAGGGTGTATGCTGAGGCGGTTCCTGAGGTATTGGATGCTGCTGCT
ACGGAGTTTGCTGGTACGGAAGAGATTGTGATGGTTGGGGAGAGGCTTTTTGGTCCTTAT
GAATGGGAAAGGTTTGATCTTTTGGTGTTGCCTCCGAGTTTTCCTCTTGGCGGAATGGAG
AATCCGAGGCTTGTTTTCTTGACGCCCACTGTGATTAAGGGGGATGCCAGTGGATCTCAG
GTGGTGGCGCATGAGCTTGCTCATGGCTGGACAGGGAATTTGATCACAAACAAAAACAAC
GAACACTTTTGGTTGAATGAGGGTTTTACAACATATGCAGAGAGAAGAATTGTTGAGGCC
GTGCAAGGTGAGGACATTGCTTCATTAAATATCGGAATTGGTTGGATGGGGCTTGTTAAG
GATATGGAGAAATTTAAGGATAACATGGAGTTCACCAAGCTAAAGACAAGTCAGGCAGGT
GTGGATCCGGATGATGTGTACTCCGTAGTTCCATATGAAAAAGGCTTCCAGTTTTTACAG
CGTATTGAGAGACAGATTGGAAGACCTGCTTTTGATGACTTTCTGAAGAAGTATATCGGT
ACCTTCAAATTTCAGTCTATTGACACTGATATGTTTCTCAATTTCCTTAAAGCTAATGTA
CCTGGAATAGAGAATGAGATTGATTTGAAACTTTGGACTGAGGGTACTGGGATCCCTCCG
GATGCCATGGAACCAGTTTCTAACCTTTACTCAAAGATTGTTTCGCTTGCTAATGAGTTC
AAGCTAGGTAGGATTCCAAGGGAGGATGAAGTTGCTGACTGGAAGGGACAGGAATGGGAA
CTTTACCTCGAGAACCTGCCCAAATCTGTTGAAGCATCTCAGGTAAGAGCTTTAGATGCT
CTCTATCATCTTTCAGAGTCGAAAAATTATGAGGTCAAGGTAGCTTTTCTTCAGCTGGCT
ATTTCAGCAAGGTGCAGAGACTACTATGGTGTGGTAGAAAGAACTCTGAAAGAAGTTGGG
AGGATATTATACCTTCGTCCGCTCTACACTGCACTCGTACAAGGTGATAGGAAGGAAGAA
GACAGAGCTTTCGCTAGAAGGGTATTCTCGGAGGCCTGTGATTCTTACCACCCCATAGCT
CAGGCAGTCGTTGAAGCTACTCTAGCAAAAAATGTTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400050523
PEP Infomation

pacid=37474212 transcript=PGSC0003DMT400074587 locus=PGSC0003DMG400028998 ID=PGSC0003DMT400074587.v4.03 annot-version=v4.03
Sequence

MAPIDPHSFTDSTHPLTTHISLTFYFDFPSSTISSATLLSFSTPYTGPLTLDTRSLSVSY
VLDPLSLSPLPFSLSPTDPILGQSLNISISKQTHQILILSKTSPSSSALQWLSPTQTFNK
NHPFLYTHCQPIHARSIFPCQDTPVARVKYTAKLNIPRELSAVMAARHVERRDPIPSEAQ
GVCEDSVWCGDDRVVEEFVMEQPIPPYLFAFAIGELGFREVGPRTRVYAEAVPEVLDAAA
TEFAGTEEIVMVGERLFGPYEWERFDLLVLPPSFPLGGMENPRLVFLTPTVIKGDASGSQ
VVAHELAHGWTGNLITNKNNEHFWLNEGFTTYAERRIVEAVQGEDIASLNIGIGWMGLVK
DMEKFKDNMEFTKLKTSQAGVDPDDVYSVVPYEKGFQFLQRIERQIGRPAFDDFLKKYIG
TFKFQSIDTDMFLNFLKANVPGIENEIDLKLWTEGTGIPPDAMEPVSNLYSKIVSLANEF
KLGRIPREDEVADWKGQEWELYLENLPKSVEASQVRALDALYHLSESKNYEVKVAFLQLA
ISARCRDYYGVVERTLKEVGRILYLRPLYTALVQGDRKEEDRAFARRVFSEACDSYHPIA
QAVVEATLAKNV*

Transcript Sequence

Transcript ID

PGSC0003DMT400074587
Transcript Infomation

pacid=37474212 locus=PGSC0003DMG400028998 ID=PGSC0003DMT400074587.v4.03 annot-version=v4.03
Sequence

ATGGCACCCATTGACCCTCATTCCTTCACTGATTCAACTCACCCACTCACAACCCATATC
TCCCTCACTTTTTACTTCGATTTTCCATCTTCCACCATCTCCTCTGCTACTCTTCTCTCC
TTTTCTACTCCTTACACTGGACCCCTCACTCTTGACACTCGCTCACTCTCTGTCTCTTAT
GTACTCGACCCTCTTTCCCTTTCCCCCTTACCTTTCTCCCTTTCTCCTACAGACCCAATT
CTTGGACAATCACTCAACATTTCGATTTCTAAACAAACCCATCAAATCTTGATTCTTTCC
AAAACTAGTCCTTCAAGTTCAGCTCTTCAATGGCTTTCGCCTACTCAAACTTTCAACAAG
AATCATCCTTTTCTGTATACCCATTGTCAGCCCATTCATGCCCGTTCAATTTTTCCTTGT
CAGGATACACCTGTTGCACGGGTTAAGTACACTGCGAAATTGAACATCCCGAGAGAGCTG
TCGGCGGTTATGGCTGCTAGACATGTGGAGAGGCGGGACCCGATTCCGTCTGAGGCGCAA
GGGGTTTGTGAGGATTCGGTTTGGTGTGGGGATGATAGGGTGGTGGAGGAATTTGTGATG
GAACAGCCTATACCTCCTTATTTATTTGCATTTGCAATTGGGGAGTTGGGGTTTAGGGAG
GTGGGACCTAGGACTAGGGTGTATGCTGAGGCGGTTCCTGAGGTATTGGATGCTGCTGCT
ACGGAGTTTGCTGGTACGGAAGAGATTGTGATGGTTGGGGAGAGGCTTTTTGGTCCTTAT
GAATGGGAAAGGTTTGATCTTTTGGTGTTGCCTCCGAGTTTTCCTCTTGGCGGAATGGAG
AATCCGAGGCTTGTTTTCTTGACGCCCACTGTGATTAAGGGGGATGCCAGTGGATCTCAG
GTGGTGGCGCATGAGCTTGCTCATGGCTGGACAGGGAATTTGATCACAAACAAAAACAAC
GAACACTTTTGGTTGAATGAGGGTTTTACAACATATGCAGAGAGAAGAATTGTTGAGGCC
GTGCAAGGTGAGGACATTGCTTCATTAAATATCGGAATTGGTTGGATGGGGCTTGTTAAG
GATATGGAGAAATTTAAGGATAACATGGAGTTCACCAAGCTAAAGACAAGTCAGGCAGGT
GTGGATCCGGATGATGTGTACTCCGTAGTTCCATATGAAAAAGGCTTCCAGTTTTTACAG
CGTATTGAGAGACAGATTGGAAGACCTGCTTTTGATGACTTTCTGAAGAAGTATATCGGT
ACCTTCAAATTTCAGTCTATTGACACTGATATGTTTCTCAATTTCCTTAAAGCTAATGTA
CCTGGAATAGAGAATGAGATTGATTTGAAACTTTGGACTGAGGGTACTGGGATCCCTCCG
GATGCCATGGAACCAGTTTCTAACCTTTACTCAAAGATTGTTTCGCTTGCTAATGAGTTC
AAGCTAGGTAGGATTCCAAGGGAGGATGAAGTTGCTGACTGGAAGGGACAGGAATGGGAA
CTTTACCTCGAGAACCTGCCCAAATCTGTTGAAGCATCTCAGGTAAGAGCTTTAGATGCT
CTCTATCATCTTTCAGAGTCGAAAAATTATGAGGTCAAGGTAGCTTTTCTTCAGCTGGCT
ATTTCAGCAAGGTGCAGAGACTACTATGGTGTGGTAGAAAGAACTCTGAAAGAAGTTGGG
AGGATATTATACCTTCGTCCGCTCTACACTGCACTCGTACAAGGTGATAGGAAGGAAGAA
GACAGAGCTTTCGCTAGAAGGGTATTCTCGGAGGCCTGTGATTCTTACCACCCCATAGCT
CAGGCAGTCGTTGAAGCTACTCTAGCAAAAAATGTTTGA