Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400074438
CDS Infomation

pacid=37451162 polypeptide=PGSC0003DMP400050412 locus=PGSC0003DMG400028925 ID=PGSC0003DMT400074438.v4.03 annot-version=v4.03
Sequence

ATGGAGATATCACAAAATTGGAGCAAAATTAGTCCTCAGCTCCATAGCTCACACTCCTTG
GAGATTTCACAAGGAGAAAGAGGGCATCTACTAGCAGTGGAAATGAATGATATTAAAGGT
GCAGCAGAAACTAAGATTGAGATCAGGGGACTGAACAAGGTATCAGATAAGGGTGATTCT
ATACTGAAGAGTGTTAGAGTTGACATACCAAGAGGAGTAATCATGGGGATTATTGGCCCC
AGTGGTAGTGGAAAATCAACAATTTTACGAGCACTAAACCGATTATGGGAACCCCCTAAA
AACACTGTTTTTCTGGATGGTACTGATATTTGTGATCTGGATGTGCTCTGTCTTCGTCGT
AAAGTTGGCATGTTGTTCCAGCTTCCAGTTCTATTTGAAGGTACAGTGGCAGATAATATA
CGCTACGGGCCAAAACTCAAGGGAAAGAAATTAAGTGATAATGAGGTTTACAAGTTGCTG
ACTTTGGCTGATCTAGACTCATCTTTCTTCTACAAGTCAGGTGGGGAACTATCTGTTGGT
CAAGCACAGAGAGTTGCACTTGCCAGAACCTTAGCTAATGAACCAGAGGTTCTGCTACTG
GATGAGCCAACTAGTGCATTAGATCCAATATCAACACAGAATATCGAGGATGTTCTAGTG
AAGCTGAGGAAGGATCAGATGATGACAATTGTGATAGTTTCTCATAGCATCAAGCAAATA
CAGAGAATAGCTGATATAGTGTGCCTGTTGGTTGATGGGGAGATTGTGGAAATTATAAAG
CCTGATCAACTCTCTGAAGCTAAGCATCCCATGGCACTTAGATTTCTTCAACTCAGCTCC
TAG

Peptide Sequence

PEP ID

PGSC0003DMP400050412
PEP Infomation

pacid=37451162 transcript=PGSC0003DMT400074438 locus=PGSC0003DMG400028925 ID=PGSC0003DMT400074438.v4.03 annot-version=v4.03
Sequence

MEISQNWSKISPQLHSSHSLEISQGERGHLLAVEMNDIKGAAETKIEIRGLNKVSDKGDS
ILKSVRVDIPRGVIMGIIGPSGSGKSTILRALNRLWEPPKNTVFLDGTDICDLDVLCLRR
KVGMLFQLPVLFEGTVADNIRYGPKLKGKKLSDNEVYKLLTLADLDSSFFYKSGGELSVG
QAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVLVKLRKDQMMTIVIVSHSIKQI
QRIADIVCLLVDGEIVEIIKPDQLSEAKHPMALRFLQLSS*

Transcript Sequence

Transcript ID

PGSC0003DMT400074438
Transcript Infomation

pacid=37451162 locus=PGSC0003DMG400028925 ID=PGSC0003DMT400074438.v4.03 annot-version=v4.03
Sequence

ATGGAGATATCACAAAATTGGAGCAAAATTAGTCCTCAGCTCCATAGCTCACACTCCTTG
GAGATTTCACAAGGAGAAAGAGGGCATCTACTAGCAGTGGAAATGAATGATATTAAAGGT
GCAGCAGAAACTAAGATTGAGATCAGGGGACTGAACAAGGTATCAGATAAGGGTGATTCT
ATACTGAAGAGTGTTAGAGTTGACATACCAAGAGGAGTAATCATGGGGATTATTGGCCCC
AGTGGTAGTGGAAAATCAACAATTTTACGAGCACTAAACCGATTATGGGAACCCCCTAAA
AACACTGTTTTTCTGGATGGTACTGATATTTGTGATCTGGATGTGCTCTGTCTTCGTCGT
AAAGTTGGCATGTTGTTCCAGCTTCCAGTTCTATTTGAAGGTACAGTGGCAGATAATATA
CGCTACGGGCCAAAACTCAAGGGAAAGAAATTAAGTGATAATGAGGTTTACAAGTTGCTG
ACTTTGGCTGATCTAGACTCATCTTTCTTCTACAAGTCAGGTGGGGAACTATCTGTTGGT
CAAGCACAGAGAGTTGCACTTGCCAGAACCTTAGCTAATGAACCAGAGGTTCTGCTACTG
GATGAGCCAACTAGTGCATTAGATCCAATATCAACACAGAATATCGAGGATGTTCTAGTG
AAGCTGAGGAAGGATCAGATGATGACAATTGTGATAGTTTCTCATAGCATCAAGCAAATA
CAGAGAATAGCTGATATAGTGTGCCTGTTGGTTGATGGGGAGATTGTGGAAATTATAAAG
CCTGATCAACTCTCTGAAGCTAAGCATCCCATGGCACTTAGATTTCTTCAACTCAGCTCC
TAG