Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400074434
CDS Infomation

pacid=37451346 polypeptide=PGSC0003DMP400050408 locus=PGSC0003DMG400028924 ID=PGSC0003DMT400074434.v4.03 annot-version=v4.03
Sequence

ATGGGACAAGAAGATGCAGTTTCATTTGAAGGCCAACTTCACAGAGACAAGAAGCCGAAA
GATAGAATATTAGATCTGATTTCGCGGCAATTTTATTGGTTAAGAAAGCTAACTGATGAG
CTACACTGGAGCTTTGTTTCGTCTGTGGTTATTTTGTATGGAATCAATCAGGGTATGAGT
TTGGGGATGAGCAGAATTAGTACGCAGTATTATATGAAAGACGAGCAGAAGTTACAGCCA
TCTGAAGCACAAGTTTATTTTGGATTAATTCAATTGCCTTGGGTTGTAAAGCCTCTTTGG
GGACTTTTAACTGATACTCTTCCTATTTTAGGATATAGGAGGCGGCCATACTTCATTCTT
GGTGGTTTCATTGGCGTTGTCGCTATGCTTAGTCTGTCAATCAACCAGAACTTACACCTC
GCATTTGCTTTGTTGTGCCTAATGGCTGGCAGTGCGGGAGTGGCAATAGCAGATGTCACT
ATTGATGCTTGTGTGACGGAGAACAGCATAAGCCATCCTTCTCTTGCTAGTGACATGCAA
AGCTTGTGTGGTCTGAGCTCGTCAGTGGGGCAACTGATTGGGTATGCAATCAGTGGGGTT
TTGGTACATCTAATTGGATCCAAGGGGGTATTTGGAGTTTTAAGCATCCCTGCTGGACTG
GTCATTTTGGTAGGAATGATGACACGTGAAGCTCATGTACACAACGTTGCATATAAGCGT
GCAAGTCAAAAGTTCATGGATGCTGGCAAGGCTATGTGGATGGCACTGAAATGCGAGAAT
GTTTGGAGGCCATGTATATACATGTACATTTCTCTAGCATTGAGTTTTCATATTCATGAG
GGAATGTTTTACTGGTATACAGATGCCAAGGATGGCCCATCTTTCTCAAAGGAAATGGTA
GGGTCCATATCTTCTGTTGGTGCGGTGGGCTCTCTTCTTGGCGTTCTCCTCTACCAGAAT
GCCTTTAAAAACCATCCTTTTCGTGGTGTACTTTTCTGGACTCAGTTACTGTATGGTGCT
TCGGGGCTGGTAGATTTAATATTGGTCTCACGTGTAAACTTAAAATTTGGTATCCCTGAT
TATGTTGTTGTTGTAAGCGATGCAGCATTCTCTCACATGATTGGGCGTCTCAAATGGATG
CCTCTCCTTGTACTCAGTTCGAAGCTTTGCCCCTCAGGCATTGAAGGAACTTTTTTTGCT
TTGCTAATGTCAATTGATCATATTGGTATGCTCACAGCATCCTGGGGTGGAGGCCTCTTA
CTTCATGCCTTCAATGTTACAAGAACACAATTTGACAACCTTTGGATAGTGATAGTAATC
CGGAGTATTTTAAGAGTACTTCCAGTTTTCATTCTGTTTTTGATACCCAGCAGTGATCCA
AATGCTTCTATTCTCCCAACTGAGATGTTGAAGAGTAAAAAGGCGGATGATATGTTGGAA
AATCAGAGTATGGAAATGGCTCCTCTTGTGAGCAGTGTCGATCAGCATTTAGTGGATACA
TGA

Peptide Sequence

PEP ID

PGSC0003DMP400050408
PEP Infomation

pacid=37451346 transcript=PGSC0003DMT400074434 locus=PGSC0003DMG400028924 ID=PGSC0003DMT400074434.v4.03 annot-version=v4.03
Sequence

MGQEDAVSFEGQLHRDKKPKDRILDLISRQFYWLRKLTDELHWSFVSSVVILYGINQGMS
LGMSRISTQYYMKDEQKLQPSEAQVYFGLIQLPWVVKPLWGLLTDTLPILGYRRRPYFIL
GGFIGVVAMLSLSINQNLHLAFALLCLMAGSAGVAIADVTIDACVTENSISHPSLASDMQ
SLCGLSSSVGQLIGYAISGVLVHLIGSKGVFGVLSIPAGLVILVGMMTREAHVHNVAYKR
ASQKFMDAGKAMWMALKCENVWRPCIYMYISLALSFHIHEGMFYWYTDAKDGPSFSKEMV
GSISSVGAVGSLLGVLLYQNAFKNHPFRGVLFWTQLLYGASGLVDLILVSRVNLKFGIPD
YVVVVSDAAFSHMIGRLKWMPLLVLSSKLCPSGIEGTFFALLMSIDHIGMLTASWGGGLL
LHAFNVTRTQFDNLWIVIVIRSILRVLPVFILFLIPSSDPNASILPTEMLKSKKADDMLE
NQSMEMAPLVSSVDQHLVDT*

Transcript Sequence

Transcript ID

PGSC0003DMT400074434
Transcript Infomation

pacid=37451346 locus=PGSC0003DMG400028924 ID=PGSC0003DMT400074434.v4.03 annot-version=v4.03
Sequence

ATGGGACAAGAAGATGCAGTTTCATTTGAAGGCCAACTTCACAGAGACAAGAAGCCGAAA
GATAGAATATTAGATCTGATTTCGCGGCAATTTTATTGGTTAAGAAAGCTAACTGATGAG
CTACACTGGAGCTTTGTTTCGTCTGTGGTTATTTTGTATGGAATCAATCAGGGTATGAGT
TTGGGGATGAGCAGAATTAGTACGCAGTATTATATGAAAGACGAGCAGAAGTTACAGCCA
TCTGAAGCACAAGTTTATTTTGGATTAATTCAATTGCCTTGGGTTGTAAAGCCTCTTTGG
GGACTTTTAACTGATACTCTTCCTATTTTAGGATATAGGAGGCGGCCATACTTCATTCTT
GGTGGTTTCATTGGCGTTGTCGCTATGCTTAGTCTGTCAATCAACCAGAACTTACACCTC
GCATTTGCTTTGTTGTGCCTAATGGCTGGCAGTGCGGGAGTGGCAATAGCAGATGTCACT
ATTGATGCTTGTGTGACGGAGAACAGCATAAGCCATCCTTCTCTTGCTAGTGACATGCAA
AGCTTGTGTGGTCTGAGCTCGTCAGTGGGGCAACTGATTGGGTATGCAATCAGTGGGGTT
TTGGTACATCTAATTGGATCCAAGGGGGTATTTGGAGTTTTAAGCATCCCTGCTGGACTG
GTCATTTTGGTAGGAATGATGACACGTGAAGCTCATGTACACAACGTTGCATATAAGCGT
GCAAGTCAAAAGTTCATGGATGCTGGCAAGGCTATGTGGATGGCACTGAAATGCGAGAAT
GTTTGGAGGCCATGTATATACATGTACATTTCTCTAGCATTGAGTTTTCATATTCATGAG
GGAATGTTTTACTGGTATACAGATGCCAAGGATGGCCCATCTTTCTCAAAGGAAATGGTA
GGGTCCATATCTTCTGTTGGTGCGGTGGGCTCTCTTCTTGGCGTTCTCCTCTACCAGAAT
GCCTTTAAAAACCATCCTTTTCGTGGTGTACTTTTCTGGACTCAGTTACTGTATGGTGCT
TCGGGGCTGGTAGATTTAATATTGGTCTCACGTGTAAACTTAAAATTTGGTATCCCTGAT
TATGTTGTTGTTGTAAGCGATGCAGCATTCTCTCACATGATTGGGCGTCTCAAATGGATG
CCTCTCCTTGTACTCAGTTCGAAGCTTTGCCCCTCAGGCATTGAAGGAACTTTTTTTGCT
TTGCTAATGTCAATTGATCATATTGGTATGCTCACAGCATCCTGGGGTGGAGGCCTCTTA
CTTCATGCCTTCAATGTTACAAGAACACAATTTGACAACCTTTGGATAGTGATAGTAATC
CGGAGTATTTTAAGAGTACTTCCAGTTTTCATTCTGTTTTTGATACCCAGCAGTGATCCA
AATGCTTCTATTCTCCCAACTGAGATGTTGAAGAGTAAAAAGGCGGATGATATGTTGGAA
AATCAGAGTATGGAAATGGCTCCTCTTGTGAGCAGTGTCGATCAGCATTTAGTGGATACA
TGA