Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400074359
CDS Infomation

pacid=37453628 polypeptide=PGSC0003DMP400050358 locus=PGSC0003DMG401028903 ID=PGSC0003DMT400074359.v4.03 annot-version=v4.03
Sequence

ATGGATGACTTTGGCATCATAGTAGATAATCAACTTGAGCTAACAGGATCTAGTTTTGAG
AACTCACCTGTCGTGGTAACTGAAGCTGCTACTGAACGACAGCATGGAAGGAAGCATTCG
GTTTCCATTAGTTTGCCACCCTCTCCTTTGGCAGGTTACTCACCACCAATTCAAAAAAGA
GTTGTTTTCAGTGATAATAATGAGATTATATTCAGCAATGTTGGTTCTTCTGATTCGGCT
ACTACATCAACCGATAATAGTACTAGACGTAACAAAAAGGTCAAGTTTTATTCTCAGACA
ATGCCAAGACATACTGCATTTCCTGAGGCACCTGCTATGGGGAAACTTCTCAGCTATTCA
GACTTCCCATCAAGGAATCCCAAGATCATTAAGCAAAGGGATTCAAGGTTTGACTCTTAC
AAAACATGGTCTGGTAAACTTGAGAGACAAATTTCAACTTTGCGCGGAAAGAATGTGGAA
GGACAGCAAGAGTCAAACTCTCGACCAACTGCAGAGATGGAAAATATTCCTGTGGACCGG
TACTTTGCTGCCTTGGAGGGACCAGAGTTGGATACTCTACGGGCATCCGAGGAAAGTATT
CTTCCTGAGGACAAGAAATGGCCTTTCCTTCTTAGATATCCTATTTCTTCCTTTGGTATC
TGTCTTGGTGTTAGTAGCCAAGCTGTTATGTGGAAAGCTCTTGCCACTTCTTCCTCAACA
AAATTCCTCCACATAAGCTTAGATGTAAATCTTGTCCTTTGGTGCATATCTGTGGTCCTT
ATGGCGGTTGTTGCTTTCACCTATGCTTTGAAAATCATTTTCTACTTTGAAGCAGTTCGT
CGTGAGTACTATCACCCCATACGTATTAACTTCTTCTTTGCTCCCTGGATATCTCTTCTA
TTCTTAGCATTAGGAGTTCCACAATCAGTTACTAAAACACTTCCCACAGTTTTATGGTAC
ATTCTTATGACCCCAATCTTTTGCTTAGAGCTTAAGATATACGGCCAATGGATGTCTGGA
GGACAACGAAGGCTCTCAAAGGTAGCCAACCCCGTAAATCATCTCTCCGTTGTTGGAAAT
TTTGTTGGTGCTTTGCTAGGTGCATCCATGGGACTAAAAGAAGGCCCAATATTCTTCTAT
GCTGTTGGATTAGCTCATTATGTGGTCTTGTTTGTGACTCTTTACCAAAGACTTCCAACA
AATGAGACACTGCCAAAGGATCTTCACCCGGTCTTCTTTCTATTTGTTGCTGCACCTAGT
GTTGCTTCTATGGCATGGGCAACAATCAAAGGGTCATTTGATTATGGATCTCGGATTTCT
TATTTCATCGCTCTGTTCCTTTATTTCTCACTGGCTGTTCGTATTAATTTCTTTCGAGGC
ATCAGGTTTTCGTTGACTTGGTGGGCGTATACTTTCCCCATGACCGGAGCTGCTATTGCT
ACCATCAGGTATTCAGCTGTAGTTACCAACACTCTCACAAAGTGTCTAGTCGTCATACTT
TGCTCTCTTGCTACACTCACAGTAACTGCGCTTCTTGTGACAACTATCATCTATGCCTTT
GTACTAAGAGACCTCTTCCCAAATGACATTTCAATTGCAATTAGTGAAAGAAGGCATAAA
TCAAGTGGAATATGGCATCTTAGTAAATTTGGTAGCTCAGACACCAAAGATATCGAACAA
TATCTTAAATATGTAGATTCTTCGGATGAAAAAGATATTGAAGCTTCTCTTGCACATCCA
AATTCTAGTACCATAGAGTTGATCACCTCTGTCTCAACCGAAGTTCGTCAGCAATGA

Peptide Sequence

PEP ID

PGSC0003DMP400050358
PEP Infomation

pacid=37453628 transcript=PGSC0003DMT400074359 locus=PGSC0003DMG401028903 ID=PGSC0003DMT400074359.v4.03 annot-version=v4.03
Sequence

MDDFGIIVDNQLELTGSSFENSPVVVTEAATERQHGRKHSVSISLPPSPLAGYSPPIQKR
VVFSDNNEIIFSNVGSSDSATTSTDNSTRRNKKVKFYSQTMPRHTAFPEAPAMGKLLSYS
DFPSRNPKIIKQRDSRFDSYKTWSGKLERQISTLRGKNVEGQQESNSRPTAEMENIPVDR
YFAALEGPELDTLRASEESILPEDKKWPFLLRYPISSFGICLGVSSQAVMWKALATSSST
KFLHISLDVNLVLWCISVVLMAVVAFTYALKIIFYFEAVRREYYHPIRINFFFAPWISLL
FLALGVPQSVTKTLPTVLWYILMTPIFCLELKIYGQWMSGGQRRLSKVANPVNHLSVVGN
FVGALLGASMGLKEGPIFFYAVGLAHYVVLFVTLYQRLPTNETLPKDLHPVFFLFVAAPS
VASMAWATIKGSFDYGSRISYFIALFLYFSLAVRINFFRGIRFSLTWWAYTFPMTGAAIA
TIRYSAVVTNTLTKCLVVILCSLATLTVTALLVTTIIYAFVLRDLFPNDISIAISERRHK
SSGIWHLSKFGSSDTKDIEQYLKYVDSSDEKDIEASLAHPNSSTIELITSVSTEVRQQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400074359
Transcript Infomation

pacid=37453628 locus=PGSC0003DMG401028903 ID=PGSC0003DMT400074359.v4.03 annot-version=v4.03
Sequence

ATGGATGACTTTGGCATCATAGTAGATAATCAACTTGAGCTAACAGGATCTAGTTTTGAG
AACTCACCTGTCGTGGTAACTGAAGCTGCTACTGAACGACAGCATGGAAGGAAGCATTCG
GTTTCCATTAGTTTGCCACCCTCTCCTTTGGCAGGTTACTCACCACCAATTCAAAAAAGA
GTTGTTTTCAGTGATAATAATGAGATTATATTCAGCAATGTTGGTTCTTCTGATTCGGCT
ACTACATCAACCGATAATAGTACTAGACGTAACAAAAAGGTCAAGTTTTATTCTCAGACA
ATGCCAAGACATACTGCATTTCCTGAGGCACCTGCTATGGGGAAACTTCTCAGCTATTCA
GACTTCCCATCAAGGAATCCCAAGATCATTAAGCAAAGGGATTCAAGGTTTGACTCTTAC
AAAACATGGTCTGGTAAACTTGAGAGACAAATTTCAACTTTGCGCGGAAAGAATGTGGAA
GGACAGCAAGAGTCAAACTCTCGACCAACTGCAGAGATGGAAAATATTCCTGTGGACCGG
TACTTTGCTGCCTTGGAGGGACCAGAGTTGGATACTCTACGGGCATCCGAGGAAAGTATT
CTTCCTGAGGACAAGAAATGGCCTTTCCTTCTTAGATATCCTATTTCTTCCTTTGGTATC
TGTCTTGGTGTTAGTAGCCAAGCTGTTATGTGGAAAGCTCTTGCCACTTCTTCCTCAACA
AAATTCCTCCACATAAGCTTAGATGTAAATCTTGTCCTTTGGTGCATATCTGTGGTCCTT
ATGGCGGTTGTTGCTTTCACCTATGCTTTGAAAATCATTTTCTACTTTGAAGCAGTTCGT
CGTGAGTACTATCACCCCATACGTATTAACTTCTTCTTTGCTCCCTGGATATCTCTTCTA
TTCTTAGCATTAGGAGTTCCACAATCAGTTACTAAAACACTTCCCACAGTTTTATGGTAC
ATTCTTATGACCCCAATCTTTTGCTTAGAGCTTAAGATATACGGCCAATGGATGTCTGGA
GGACAACGAAGGCTCTCAAAGGTAGCCAACCCCGTAAATCATCTCTCCGTTGTTGGAAAT
TTTGTTGGTGCTTTGCTAGGTGCATCCATGGGACTAAAAGAAGGCCCAATATTCTTCTAT
GCTGTTGGATTAGCTCATTATGTGGTCTTGTTTGTGACTCTTTACCAAAGACTTCCAACA
AATGAGACACTGCCAAAGGATCTTCACCCGGTCTTCTTTCTATTTGTTGCTGCACCTAGT
GTTGCTTCTATGGCATGGGCAACAATCAAAGGGTCATTTGATTATGGATCTCGGATTTCT
TATTTCATCGCTCTGTTCCTTTATTTCTCACTGGCTGTTCGTATTAATTTCTTTCGAGGC
ATCAGGTTTTCGTTGACTTGGTGGGCGTATACTTTCCCCATGACCGGAGCTGCTATTGCT
ACCATCAGGTATTCAGCTGTAGTTACCAACACTCTCACAAAGTGTCTAGTCGTCATACTT
TGCTCTCTTGCTACACTCACAGTAACTGCGCTTCTTGTGACAACTATCATCTATGCCTTT
GTACTAAGAGACCTCTTCCCAAATGACATTTCAATTGCAATTAGTGAAAGAAGGCATAAA
TCAAGTGGAATATGGCATCTTAGTAAATTTGGTAGCTCAGACACCAAAGATATCGAACAA
TATCTTAAATATGTAGATTCTTCGGATGAAAAAGATATTGAAGCTTCTCTTGCACATCCA
AATTCTAGTACCATAGAGTTGATCACCTCTGTCTCAACCGAAGTTCGTCAGCAATGA