Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400074342
CDS Infomation

pacid=37453127 polypeptide=PGSC0003DMP400050345 locus=PGSC0003DMG401028895 ID=PGSC0003DMT400074342.v4.03 annot-version=v4.03
Sequence

ATGTTAACCGTAAAACCTACCGCTGCCGCCCTCAGATTCTCCGCCGTCAACTTCGATACC
ACTTCCCGCCGGTTATCTCATTCTCCCAGCTTCTTCATCCCTCCTCGAGATAAATTTGGA
AGATTGACGGATAATTATGCTGGAAGAAAAACGTGCAAGGGAAAAATTGGAATTAAAGCA
ACTGCAAAGGATCATTTCAGCTCGGGTTCTGAGCCAGTAAAACAGAATGCGAAGCAGTCG
AGCTATCATCCATCTGAGGATATTGGGGAGCCGGAACTATTTGGGAATGAGGAAGCTCAA
CTCAAGCCAGCTGAATGTACAAGGACAATTATTGAGGTAAATAACAAAGCAACACTCATG
TTTTCAAGTGCTATCAGTGATGTAATGCGTGCAAATATTTTCTGGCCAGATTTGCCTTAC
ACAACTGATGAACTTGGAAATGTCTACTTCCAAGTGAAGAATGACGAAGACGTTCTGAAA
AATCCAACAACTGAAGAAAACGTTGTGGAAGTAATTATTGGCCTAGATACATCCGAAATG
CAGAGTGAGATGGAGTCATCAGGTCAATCCCAACTTGATTACCATATAGATGAATTTGAT
GACGAGGATATCGATATTGATGATGAAGACGACATTGACGATGACGATGACGATGACGAT
GATGATGATGATGACGATGATGATGAAGCGGATTGGGTTTCTGTTCTTGACGATGAAGAA
GATCCGAGTGGGGATCCTGACTTGGAGGATTGGGCTACATTAGAGACGATGCGATCTTCT
CATCCGATACACTTTGCCCAACAAATTAGTGAGGTTGTAACAGATGATCCTATAGATTTT
ATGGATCAGCCTCCAGCAGGTCTTATTATTCATGGCCTTCTAAGGCCAGCTTTCCTTGAA
GATCACACCACCATTCCAAAGCAGATATCTGAACATGAATCAAACGATGCTGGTATAGAA
CAAATGGAACAAGTGGCAGAACATAAGCAAAATGGCAGTGTTCAAGTCAATGGCCACAAA
CATGAAAGTGAATCTTCGCAAGATAACCCAAGTTGTCCAGAGGAATTGGAGAAGGATGAA
ACCCTTGGAAATGGAACTTCATTTTACAAGCTAGAGATGATTAAAATTCAGTTAATTTCT
TCACATGGGCAGCAAATCTTAGTTGAGTTAGAAGATTTTTGTCAAGCTAGGCCTGATGCA
ATAGCTCATTCGGCTGCCAATATTATATCACGGCTTAAAGCTGTAGGAGAAAAAACCACG
CAGGCTCTCAGATCTCTCTGTTGGAGATGCAAGGGAATTCAAGTGGAGGAAGTGGTTCTG
ATAGGTGTAGACAGCCTTGGTTTTGACGTAAGAGTTTGCTCTGGAGCACAAATTCAGACA
CTGCGGTTTTCCTTTAAAAAGCGGGCAACCTCGGAGTACAGTGCCGAAAGACAATTAAAC
GATCTGCTGTATCCAAGGGTCCACCCTAAGTTACATCAAAAGAAAGAAACTCACCAAGCT
GAATCATGA

Peptide Sequence

PEP ID

PGSC0003DMP400050345
PEP Infomation

pacid=37453127 transcript=PGSC0003DMT400074342 locus=PGSC0003DMG401028895 ID=PGSC0003DMT400074342.v4.03 annot-version=v4.03
Sequence

MLTVKPTAAALRFSAVNFDTTSRRLSHSPSFFIPPRDKFGRLTDNYAGRKTCKGKIGIKA
TAKDHFSSGSEPVKQNAKQSSYHPSEDIGEPELFGNEEAQLKPAECTRTIIEVNNKATLM
FSSAISDVMRANIFWPDLPYTTDELGNVYFQVKNDEDVLKNPTTEENVVEVIIGLDTSEM
QSEMESSGQSQLDYHIDEFDDEDIDIDDEDDIDDDDDDDDDDDDDDDDEADWVSVLDDEE
DPSGDPDLEDWATLETMRSSHPIHFAQQISEVVTDDPIDFMDQPPAGLIIHGLLRPAFLE
DHTTIPKQISEHESNDAGIEQMEQVAEHKQNGSVQVNGHKHESESSQDNPSCPEELEKDE
TLGNGTSFYKLEMIKIQLISSHGQQILVELEDFCQARPDAIAHSAANIISRLKAVGEKTT
QALRSLCWRCKGIQVEEVVLIGVDSLGFDVRVCSGAQIQTLRFSFKKRATSEYSAERQLN
DLLYPRVHPKLHQKKETHQAES*

Transcript Sequence

Transcript ID

PGSC0003DMT400074342
Transcript Infomation

pacid=37453127 locus=PGSC0003DMG401028895 ID=PGSC0003DMT400074342.v4.03 annot-version=v4.03
Sequence

ATGTTAACCGTAAAACCTACCGCTGCCGCCCTCAGATTCTCCGCCGTCAACTTCGATACC
ACTTCCCGCCGGTTATCTCATTCTCCCAGCTTCTTCATCCCTCCTCGAGATAAATTTGGA
AGATTGACGGATAATTATGCTGGAAGAAAAACGTGCAAGGGAAAAATTGGAATTAAAGCA
ACTGCAAAGGATCATTTCAGCTCGGGTTCTGAGCCAGTAAAACAGAATGCGAAGCAGTCG
AGCTATCATCCATCTGAGGATATTGGGGAGCCGGAACTATTTGGGAATGAGGAAGCTCAA
CTCAAGCCAGCTGAATGTACAAGGACAATTATTGAGGTAAATAACAAAGCAACACTCATG
TTTTCAAGTGCTATCAGTGATGTAATGCGTGCAAATATTTTCTGGCCAGATTTGCCTTAC
ACAACTGATGAACTTGGAAATGTCTACTTCCAAGTGAAGAATGACGAAGACGTTCTGAAA
AATCCAACAACTGAAGAAAACGTTGTGGAAGTAATTATTGGCCTAGATACATCCGAAATG
CAGAGTGAGATGGAGTCATCAGGTCAATCCCAACTTGATTACCATATAGATGAATTTGAT
GACGAGGATATCGATATTGATGATGAAGACGACATTGACGATGACGATGACGATGACGAT
GATGATGATGATGACGATGATGATGAAGCGGATTGGGTTTCTGTTCTTGACGATGAAGAA
GATCCGAGTGGGGATCCTGACTTGGAGGATTGGGCTACATTAGAGACGATGCGATCTTCT
CATCCGATACACTTTGCCCAACAAATTAGTGAGGTTGTAACAGATGATCCTATAGATTTT
ATGGATCAGCCTCCAGCAGGTCTTATTATTCATGGCCTTCTAAGGCCAGCTTTCCTTGAA
GATCACACCACCATTCCAAAGCAGATATCTGAACATGAATCAAACGATGCTGGTATAGAA
CAAATGGAACAAGTGGCAGAACATAAGCAAAATGGCAGTGTTCAAGTCAATGGCCACAAA
CATGAAAGTGAATCTTCGCAAGATAACCCAAGTTGTCCAGAGGAATTGGAGAAGGATGAA
ACCCTTGGAAATGGAACTTCATTTTACAAGCTAGAGATGATTAAAATTCAGTTAATTTCT
TCACATGGGCAGCAAATCTTAGTTGAGTTAGAAGATTTTTGTCAAGCTAGGCCTGATGCA
ATAGCTCATTCGGCTGCCAATATTATATCACGGCTTAAAGCTGTAGGAGAAAAAACCACG
CAGGCTCTCAGATCTCTCTGTTGGAGATGCAAGGGAATTCAAGTGGAGGAAGTGGTTCTG
ATAGGTGTAGACAGCCTTGGTTTTGACGTAAGAGTTTGCTCTGGAGCACAAATTCAGACA
CTGCGGTTTTCCTTTAAAAAGCGGGCAACCTCGGAGTACAGTGCCGAAAGACAATTAAAC
GATCTGCTGTATCCAAGGGTCCACCCTAAGTTACATCAAAAGAAAGAAACTCACCAAGCT
GAATCATGA