Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400074313
CDS Infomation

pacid=37457133 polypeptide=PGSC0003DMP400050324 locus=PGSC0003DMG400028883 ID=PGSC0003DMT400074313.v4.03 annot-version=v4.03
Sequence

ATGTTATCATATTATTGCTATCTTCTCTGCTTCACAACACTTTGTTTAGCAGAAGACCCT
TATGTATATTTTGACTGGACTCTTTCCTACATTACAGCTTCTCCTCTTGGAGTTAAGCAG
CAGGTGATTGGAATAAACGGTCAATTTCCAGGACCCATACTCAATGTCACTACCAACTGG
AATGTGGTTGTCAATGTTAAAAATGATCTTGATGAGCCTATGCTTCTTACATGGAATGGT
ATCCAGCAGAGAAAGGATACATGGCAAGATGGTGTATCTGGCACAAATTGTCCCATTCCT
GCTGGCTGGAATTGGACATATGAATTTCAAGTTAAAGATCAGATAGGCAGTTTCTTTTAT
TTCCCTTCCTTAAGCTTCCAGAGAGCTGCTGGTGGATATGGAGGTATCACTATAAACAAC
AGAAATGTCATTCCTCTGCCGTTTGCGACACCAGATGGGGACATCACACTCTTTATTAGT
GACTGGTTTATAAAGAGTCATAAGGAACTCAGAAAAGAAATCGAAACTGGAGTTGGCCTT
GGAGCTCCTGATGGTATCCTAATCAATGGACTAGGTCCTTACCATTATGACAATGCCGTT
GTATCAGGCAGTATAGCCTACCAGACAGTAAATGTAGAACCAGGAAAAACATACCGCCTT
CGAGTACACAATGTTGGTGTTTCTACTAGCTTGAATTTCAGAATCCAAAGTCATAACCTT
CTTCTTGTGGAGACTGAAGGTTCATACACAGTACAACAGAACTACACAAGCTTGGATATC
CACGTCGGTCAATCATATTCATTCCTGGTTACAATGGATCAAAATGCCAGCAGTGATTAT
TACATTGTTGCTAGTCCACGCTTTGTTAATTCTTCTGATTCGTCGAAGTTGGTAGGAGTC
TCTGTCTTGCATTACTCAAATTCGCAAGGACCCGCTTCAGGTCCTCTTCCAGACCCTCCT
ATGGAATCTGACACATTTTTCTCAATGAGTCAAGCAAGATCCATAAGATGGAATGTTTCT
GCTGGTGCGGCACGGCCAAACCCCCAAGGATCCTTCAAATATGGTGAAATCACTGTGACT
GATGTCTTTGTCCTTCATAATAGGCCTGCAGAGCTAATAGAGGGGAAATGGCGCACTACT
CTCAGTGGTATTTCATACTTAGCGCCATCAACACCTCTAAAACTTGCTGAGCAATTTAAC
ATCCCAGGCGTTTTCAAGCTTGACTTCCCCAATAAAATGATGAATAGGCCGGCAAAAGTT
GATACGTCAGTAATTAATGGTACTTACAAAGCATTCGTGGAAATCATATTCCAAAACAAT
GATACAACTGTTCAGAGCTATCACCTTGATGGCTACGCCTTTTTTGTTGTCGGCATGGAT
TACGGGCTATGGACGGAGAATAGTAGAAGCACCTACAACAAATGGGATGGTGTTGCTCGA
TGCACTACCCAGGTGTTTCCAGGTGCTTGGACTGCTATTTTAGTCTTCCTAGACAATCCT
GGAATTTGGAATTTACGTGCTCAAAACCTTGATTCATGGTACCTTGGTCAAGAAACTTAT
GTTAGTGTGGTGAATCCGGAGAACTCAGAGCTTCCCGTTCCAGCAAACACCATCTTTTGT
GGTGCACTGTCACCTTTACAGAAGGACCAAGCTCGGAGAGTAAATTTCTCTAGTGCACCA
TCGTTGACGAAAACAATGAAGCTGATCTTTATAGGTTTTCTTGCATCACTGCTTGGAAGT
TTTATGAGGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400050324
PEP Infomation

pacid=37457133 transcript=PGSC0003DMT400074313 locus=PGSC0003DMG400028883 ID=PGSC0003DMT400074313.v4.03 annot-version=v4.03
Sequence

MLSYYCYLLCFTTLCLAEDPYVYFDWTLSYITASPLGVKQQVIGINGQFPGPILNVTTNW
NVVVNVKNDLDEPMLLTWNGIQQRKDTWQDGVSGTNCPIPAGWNWTYEFQVKDQIGSFFY
FPSLSFQRAAGGYGGITINNRNVIPLPFATPDGDITLFISDWFIKSHKELRKEIETGVGL
GAPDGILINGLGPYHYDNAVVSGSIAYQTVNVEPGKTYRLRVHNVGVSTSLNFRIQSHNL
LLVETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASSDYYIVASPRFVNSSDSSKLVGV
SVLHYSNSQGPASGPLPDPPMESDTFFSMSQARSIRWNVSAGAARPNPQGSFKYGEITVT
DVFVLHNRPAELIEGKWRTTLSGISYLAPSTPLKLAEQFNIPGVFKLDFPNKMMNRPAKV
DTSVINGTYKAFVEIIFQNNDTTVQSYHLDGYAFFVVGMDYGLWTENSRSTYNKWDGVAR
CTTQVFPGAWTAILVFLDNPGIWNLRAQNLDSWYLGQETYVSVVNPENSELPVPANTIFC
GALSPLQKDQARRVNFSSAPSLTKTMKLIFIGFLASLLGSFMR*

Transcript Sequence

Transcript ID

PGSC0003DMT400074313
Transcript Infomation

pacid=37457133 locus=PGSC0003DMG400028883 ID=PGSC0003DMT400074313.v4.03 annot-version=v4.03
Sequence

ATGTTATCATATTATTGCTATCTTCTCTGCTTCACAACACTTTGTTTAGCAGAAGACCCT
TATGTATATTTTGACTGGACTCTTTCCTACATTACAGCTTCTCCTCTTGGAGTTAAGCAG
CAGGTGATTGGAATAAACGGTCAATTTCCAGGACCCATACTCAATGTCACTACCAACTGG
AATGTGGTTGTCAATGTTAAAAATGATCTTGATGAGCCTATGCTTCTTACATGGAATGGT
ATCCAGCAGAGAAAGGATACATGGCAAGATGGTGTATCTGGCACAAATTGTCCCATTCCT
GCTGGCTGGAATTGGACATATGAATTTCAAGTTAAAGATCAGATAGGCAGTTTCTTTTAT
TTCCCTTCCTTAAGCTTCCAGAGAGCTGCTGGTGGATATGGAGGTATCACTATAAACAAC
AGAAATGTCATTCCTCTGCCGTTTGCGACACCAGATGGGGACATCACACTCTTTATTAGT
GACTGGTTTATAAAGAGTCATAAGGAACTCAGAAAAGAAATCGAAACTGGAGTTGGCCTT
GGAGCTCCTGATGGTATCCTAATCAATGGACTAGGTCCTTACCATTATGACAATGCCGTT
GTATCAGGCAGTATAGCCTACCAGACAGTAAATGTAGAACCAGGAAAAACATACCGCCTT
CGAGTACACAATGTTGGTGTTTCTACTAGCTTGAATTTCAGAATCCAAAGTCATAACCTT
CTTCTTGTGGAGACTGAAGGTTCATACACAGTACAACAGAACTACACAAGCTTGGATATC
CACGTCGGTCAATCATATTCATTCCTGGTTACAATGGATCAAAATGCCAGCAGTGATTAT
TACATTGTTGCTAGTCCACGCTTTGTTAATTCTTCTGATTCGTCGAAGTTGGTAGGAGTC
TCTGTCTTGCATTACTCAAATTCGCAAGGACCCGCTTCAGGTCCTCTTCCAGACCCTCCT
ATGGAATCTGACACATTTTTCTCAATGAGTCAAGCAAGATCCATAAGATGGAATGTTTCT
GCTGGTGCGGCACGGCCAAACCCCCAAGGATCCTTCAAATATGGTGAAATCACTGTGACT
GATGTCTTTGTCCTTCATAATAGGCCTGCAGAGCTAATAGAGGGGAAATGGCGCACTACT
CTCAGTGGTATTTCATACTTAGCGCCATCAACACCTCTAAAACTTGCTGAGCAATTTAAC
ATCCCAGGCGTTTTCAAGCTTGACTTCCCCAATAAAATGATGAATAGGCCGGCAAAAGTT
GATACGTCAGTAATTAATGGTACTTACAAAGCATTCGTGGAAATCATATTCCAAAACAAT
GATACAACTGTTCAGAGCTATCACCTTGATGGCTACGCCTTTTTTGTTGTCGGCATGGAT
TACGGGCTATGGACGGAGAATAGTAGAAGCACCTACAACAAATGGGATGGTGTTGCTCGA
TGCACTACCCAGGTGTTTCCAGGTGCTTGGACTGCTATTTTAGTCTTCCTAGACAATCCT
GGAATTTGGAATTTACGTGCTCAAAACCTTGATTCATGGTACCTTGGTCAAGAAACTTAT
GTTAGTGTGGTGAATCCGGAGAACTCAGAGCTTCCCGTTCCAGCAAACACCATCTTTTGT
GGTGCACTGTCACCTTTACAGAAGGACCAAGCTCGGAGAGTAAATTTCTCTAGTGCACCA
TCGTTGACGAAAACAATGAAGCTGATCTTTATAGGTTTTCTTGCATCACTGCTTGGAAGT
TTTATGAGGTAA