Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400074219
CDS Infomation

pacid=37447455 polypeptide=PGSC0003DMP400050250 locus=PGSC0003DMG401028844 ID=PGSC0003DMT400074219.v4.03 annot-version=v4.03
Sequence

ATGTTGAAGTTAGCTGTTTTCTTAAGCCTTATTTGGGCATTGACTCTTCTCTATGGAGAG
ATGTTCTCATTTTGGGTCCCTTTTCTCTCATGTTCTTGGCCTCATCCTCCTCCTTCTTCT
TCCATGTCAGATGGAGTAGATCATCAACGTGATTACGTGAAAATTGCTGTTCTGACTGAT
CCTCAGCTCATGGACAGAACTTCTCTTCATCTTGCCCCGAAATCCTTTGCACTTGAAGCT
GCTCAGTTCTATACATATTTGTATATGCGCAGGGCATTCCTATCATCTATTTTACCATCC
AAACCTGATATAATTCTGTTCCTAGGTGATTGTTCCGACGGTGGGTCTTTTCTTTCTGAT
GAAGAATGGCAGGAATCCCGGAGTCGGTTTAAGCATATATTTGACATTGACATGCTTGAG
CAAACTACAAACATAAAGCTGTACTACCTTGCTGGAAACCATGATATAGGGTATGCAGCT
TTTCACTCGCGCATGCCAGAGGTTATCAAACAGTATGAGAAAGCATTTGGTGCAAGGAGC
TATCAGTTTACAGCTGGGAAAGTAGATTTCATCACCATCGATGCGCAAACCTTAGATGGG
TATCCCCAAGACAATGTAACCCCTGCCACATGGGAATTTGTCAAAAATGTCTCTAAGCAT
CTGTCTTCAAATCCAAGGGTTCTATTGACTCATATTCCATTGTATCGACCAGATCAAACT
GTGTGCGGTTCATATCGCTCATCATCAATTATTAATCAGAGAATCAACCGTGCTGCTCAG
GATAATGAAATATTATATCATAACTATATTACTGAAAAAGGAACAAATGTTCTGCTTGAC
TCGATCAAACCTGCACTAGTTCTCTCCTGGCATGACCATGATCAGTGTACAGTAATCCAC
AAATCCAAATATGGCTCCGTAAAAGAGCATACTCTAGGGACTATAAGCTGGCAGCAGGGA
AATTTGTTTCCATCTTACATGCTATTATCTGCAAGTAATCTTATCTTACCGAACGGATCA
ATGCCAGAGGAGGCAATTTCCACAAAAGTGTGCTTTCTCCCTGTGCAGTTATACATTTAC
ATATGGTATATTTTGCTGTTTGTCATGACCCTTCTTATTGCCGTCCTTTGGCCCACGAAT
GGGGTGCTCTTTCCGCACTATCTCGATGGATTTCTGAGGAATGTAAGAGGTCTAATTAGT
TCAAGCTTTTCGGGAGGTGGGGAAAAACTGAAAAGTGAAGATGAGATATATGAATATGAG
GAGATATGGGATGCAGAAGGATCGATGCACCTCATAAAGAAAACCTTTAAAGTGTCTTCT
ACATGCTCAAGCGACAGCGCTTCAGTAGAACGGGGTAATGCTGTCATGCGATCAGTTGCC
AGAAAACAAGAGACGGATACCTCAAATCCCAGTGATGTGACTTTACATATAGGATCAGAT
ACCGCGGTAAAAGCACTGCCTCAGACAAACAAATCAAAGACAGAGATGGTAATTAGGAGA
TTGGTGAGGACATTGAGTATAATTACTATCATTGCAGCTTTTAACATCCCTCTATATATG
ATGCTTCTTTTCAAAGATTGGATTGATAAATGA

Peptide Sequence

PEP ID

PGSC0003DMP400050250
PEP Infomation

pacid=37447455 transcript=PGSC0003DMT400074219 locus=PGSC0003DMG401028844 ID=PGSC0003DMT400074219.v4.03 annot-version=v4.03
Sequence

MLKLAVFLSLIWALTLLYGEMFSFWVPFLSCSWPHPPPSSSMSDGVDHQRDYVKIAVLTD
PQLMDRTSLHLAPKSFALEAAQFYTYLYMRRAFLSSILPSKPDIILFLGDCSDGGSFLSD
EEWQESRSRFKHIFDIDMLEQTTNIKLYYLAGNHDIGYAAFHSRMPEVIKQYEKAFGARS
YQFTAGKVDFITIDAQTLDGYPQDNVTPATWEFVKNVSKHLSSNPRVLLTHIPLYRPDQT
VCGSYRSSSIINQRINRAAQDNEILYHNYITEKGTNVLLDSIKPALVLSWHDHDQCTVIH
KSKYGSVKEHTLGTISWQQGNLFPSYMLLSASNLILPNGSMPEEAISTKVCFLPVQLYIY
IWYILLFVMTLLIAVLWPTNGVLFPHYLDGFLRNVRGLISSSFSGGGEKLKSEDEIYEYE
EIWDAEGSMHLIKKTFKVSSTCSSDSASVERGNAVMRSVARKQETDTSNPSDVTLHIGSD
TAVKALPQTNKSKTEMVIRRLVRTLSIITIIAAFNIPLYMMLLFKDWIDK*

Transcript Sequence

Transcript ID

PGSC0003DMT400074219
Transcript Infomation

pacid=37447455 locus=PGSC0003DMG401028844 ID=PGSC0003DMT400074219.v4.03 annot-version=v4.03
Sequence

ATGTTGAAGTTAGCTGTTTTCTTAAGCCTTATTTGGGCATTGACTCTTCTCTATGGAGAG
ATGTTCTCATTTTGGGTCCCTTTTCTCTCATGTTCTTGGCCTCATCCTCCTCCTTCTTCT
TCCATGTCAGATGGAGTAGATCATCAACGTGATTACGTGAAAATTGCTGTTCTGACTGAT
CCTCAGCTCATGGACAGAACTTCTCTTCATCTTGCCCCGAAATCCTTTGCACTTGAAGCT
GCTCAGTTCTATACATATTTGTATATGCGCAGGGCATTCCTATCATCTATTTTACCATCC
AAACCTGATATAATTCTGTTCCTAGGTGATTGTTCCGACGGTGGGTCTTTTCTTTCTGAT
GAAGAATGGCAGGAATCCCGGAGTCGGTTTAAGCATATATTTGACATTGACATGCTTGAG
CAAACTACAAACATAAAGCTGTACTACCTTGCTGGAAACCATGATATAGGGTATGCAGCT
TTTCACTCGCGCATGCCAGAGGTTATCAAACAGTATGAGAAAGCATTTGGTGCAAGGAGC
TATCAGTTTACAGCTGGGAAAGTAGATTTCATCACCATCGATGCGCAAACCTTAGATGGG
TATCCCCAAGACAATGTAACCCCTGCCACATGGGAATTTGTCAAAAATGTCTCTAAGCAT
CTGTCTTCAAATCCAAGGGTTCTATTGACTCATATTCCATTGTATCGACCAGATCAAACT
GTGTGCGGTTCATATCGCTCATCATCAATTATTAATCAGAGAATCAACCGTGCTGCTCAG
GATAATGAAATATTATATCATAACTATATTACTGAAAAAGGAACAAATGTTCTGCTTGAC
TCGATCAAACCTGCACTAGTTCTCTCCTGGCATGACCATGATCAGTGTACAGTAATCCAC
AAATCCAAATATGGCTCCGTAAAAGAGCATACTCTAGGGACTATAAGCTGGCAGCAGGGA
AATTTGTTTCCATCTTACATGCTATTATCTGCAAGTAATCTTATCTTACCGAACGGATCA
ATGCCAGAGGAGGCAATTTCCACAAAAGTGTGCTTTCTCCCTGTGCAGTTATACATTTAC
ATATGGTATATTTTGCTGTTTGTCATGACCCTTCTTATTGCCGTCCTTTGGCCCACGAAT
GGGGTGCTCTTTCCGCACTATCTCGATGGATTTCTGAGGAATGTAAGAGGTCTAATTAGT
TCAAGCTTTTCGGGAGGTGGGGAAAAACTGAAAAGTGAAGATGAGATATATGAATATGAG
GAGATATGGGATGCAGAAGGATCGATGCACCTCATAAAGAAAACCTTTAAAGTGTCTTCT
ACATGCTCAAGCGACAGCGCTTCAGTAGAACGGGGTAATGCTGTCATGCGATCAGTTGCC
AGAAAACAAGAGACGGATACCTCAAATCCCAGTGATGTGACTTTACATATAGGATCAGAT
ACCGCGGTAAAAGCACTGCCTCAGACAAACAAATCAAAGACAGAGATGGTAATTAGGAGA
TTGGTGAGGACATTGAGTATAATTACTATCATTGCAGCTTTTAACATCCCTCTATATATG
ATGCTTCTTTTCAAAGATTGGATTGATAAATGA