Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400074186
CDS Infomation

pacid=37447769 polypeptide=PGSC0003DMP400050231 locus=PGSC0003DMG400028832 ID=PGSC0003DMT400074186.v4.03 annot-version=v4.03
Sequence

ATGGGTCGATCGCCAAGTTTGCTGTCCCGGAATGGAAGTTTTAGGCCAGAAAATCTGGGG
CAAAATGCATTGGCAGTGATAGGGAATCTCTGTTTCACTATATTTGTTGTTGGAGTTTTG
ATTTTTACTATAATGGCTGCAACTTATGAGCCTGAAGATCCTTTATTCCATCCTTCGACA
AAAATCACTAATTTCCTTACGTCTAAATCCGATGCCACGTTTAAAGCTGATGACACTGTT
ATGAAGACTGGTGAGGACTTTATTGGTGCAAATCAGAAAGCATTTTCTACCTTTATAAAC
CTAACAGATGTGGACGTTTCGGTGTCAGCTACAGACAGTGGCACTGAGAGTGATCCTGAT
TGTCATGGGAAAACTGATGAACCAATTGATTGTAATGATCCAGATGTGTTTCATTTGTTG
ATGAGAGTAGCTATTGAGAAGTTCAAGGATATACATTTTTACAGATTTGGGAAGTCAGTC
CGTGGATCGAATGATAGTTCGTGCCACATGGCTTGGCGGTTTAGGCCTAAGGATGGAAAA
ACTGCTGCATTTTACAAGGATTACCGCGAGTTTGTGGTTTCTAGGTCGGACAACTGTACA
CTTAGTGTGGTGAGCATTGGAGAGTATCATACTGGTGGAAATGCTCGGAAAAGGAAGAGA
AAGAGCAAGGACAGAATTTCAGGAAAGTCAGACGAGGGGTTTGAGAAAGTTGCGAAAACA
GGGGGACAAAATGTTGCTCTGCCTGAGGTTGGTGAAGCTGTGAATGACTCACTTCCTGTG
GTGGAATCAGAGAGTTCTTTCAAGCGCGGGAAGTATTTGGTATATCATGGAGGTGGAGAT
AGGTGCAAGAGCATGAACCATTATCTCTGGAGCTTTATGTGTGCATTAGGCGAGGCACAA
TACTTGAACAGGACATTGATAATGGACTTAAGTATTTGTTTATCCAAGATATACACTTCA
TCCGGTGTAGACGAAGAAGGAAAGGATTTCAGGTTTTACTTCGACTTTGAGCATTTAAAG
GATTCAGCATCAGTTCTTGATCAGGAACAGTTTTGGGCTGATTGGGAAAAATGGCACCAA
AAAGATGGACTATCTCTCCATCTTGTTGAAGACTTTAGAGTTAATCCAATGAAGTTATCT
GGACTGAAGGATACTTTAATCGTGAGGAAATTTGGTAACGTGGAGCCAGATAATTACTGG
TACAGAGTATGTGAGGGTGAGACAGAATCTGTTGTTCAACGGCCATGGCATTTGGTATGG
AAGTCAAGACGTTTGATGGACATTGTCTCGGCTATTGCCTCTAGGTTGAACTGGGATTAT
GACTCAGTTCATGTTGTGAGAGGCGAGAAGGCAAGGAACCGTGAAATGTGGCCACATCTT
GCTGAAGATACTTCTCCAGATGCTCTTCTATCTAGTTTGCAAGACAAGATAGATGATGGA
AGGAACCTATATATCGCGACAAATGAACAAGAGACATCTTTTTTCAATCCTTTAAAGGAT
AAGTACTCTACACATTTCCTCAGTGACTATAGGGATCTTTGGGATGAAGGCAGTGAATGG
TATTTAGACACAGCAAAACTTCACAACGGAAGTCCTGTCGAATTTGATGGTTACATGAGA
GTTTCAGTTGACACTGAAGTTTTCTTGAGAGGTAAAAAGCAAATCGAGACATTTAACGAT
CTCACTAAAGACTGCAAGGATGGTATCAATACCTGCACTTCTTCCAGCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400050231
PEP Infomation

pacid=37447769 transcript=PGSC0003DMT400074186 locus=PGSC0003DMG400028832 ID=PGSC0003DMT400074186.v4.03 annot-version=v4.03
Sequence

MGRSPSLLSRNGSFRPENLGQNALAVIGNLCFTIFVVGVLIFTIMAATYEPEDPLFHPST
KITNFLTSKSDATFKADDTVMKTGEDFIGANQKAFSTFINLTDVDVSVSATDSGTESDPD
CHGKTDEPIDCNDPDVFHLLMRVAIEKFKDIHFYRFGKSVRGSNDSSCHMAWRFRPKDGK
TAAFYKDYREFVVSRSDNCTLSVVSIGEYHTGGNARKRKRKSKDRISGKSDEGFEKVAKT
GGQNVALPEVGEAVNDSLPVVESESSFKRGKYLVYHGGGDRCKSMNHYLWSFMCALGEAQ
YLNRTLIMDLSICLSKIYTSSGVDEEGKDFRFYFDFEHLKDSASVLDQEQFWADWEKWHQ
KDGLSLHLVEDFRVNPMKLSGLKDTLIVRKFGNVEPDNYWYRVCEGETESVVQRPWHLVW
KSRRLMDIVSAIASRLNWDYDSVHVVRGEKARNREMWPHLAEDTSPDALLSSLQDKIDDG
RNLYIATNEQETSFFNPLKDKYSTHFLSDYRDLWDEGSEWYLDTAKLHNGSPVEFDGYMR
VSVDTEVFLRGKKQIETFNDLTKDCKDGINTCTSSS*

Transcript Sequence

Transcript ID

PGSC0003DMT400074186
Transcript Infomation

pacid=37447769 locus=PGSC0003DMG400028832 ID=PGSC0003DMT400074186.v4.03 annot-version=v4.03
Sequence

ATGGGTCGATCGCCAAGTTTGCTGTCCCGGAATGGAAGTTTTAGGCCAGAAAATCTGGGG
CAAAATGCATTGGCAGTGATAGGGAATCTCTGTTTCACTATATTTGTTGTTGGAGTTTTG
ATTTTTACTATAATGGCTGCAACTTATGAGCCTGAAGATCCTTTATTCCATCCTTCGACA
AAAATCACTAATTTCCTTACGTCTAAATCCGATGCCACGTTTAAAGCTGATGACACTGTT
ATGAAGACTGGTGAGGACTTTATTGGTGCAAATCAGAAAGCATTTTCTACCTTTATAAAC
CTAACAGATGTGGACGTTTCGGTGTCAGCTACAGACAGTGGCACTGAGAGTGATCCTGAT
TGTCATGGGAAAACTGATGAACCAATTGATTGTAATGATCCAGATGTGTTTCATTTGTTG
ATGAGAGTAGCTATTGAGAAGTTCAAGGATATACATTTTTACAGATTTGGGAAGTCAGTC
CGTGGATCGAATGATAGTTCGTGCCACATGGCTTGGCGGTTTAGGCCTAAGGATGGAAAA
ACTGCTGCATTTTACAAGGATTACCGCGAGTTTGTGGTTTCTAGGTCGGACAACTGTACA
CTTAGTGTGGTGAGCATTGGAGAGTATCATACTGGTGGAAATGCTCGGAAAAGGAAGAGA
AAGAGCAAGGACAGAATTTCAGGAAAGTCAGACGAGGGGTTTGAGAAAGTTGCGAAAACA
GGGGGACAAAATGTTGCTCTGCCTGAGGTTGGTGAAGCTGTGAATGACTCACTTCCTGTG
GTGGAATCAGAGAGTTCTTTCAAGCGCGGGAAGTATTTGGTATATCATGGAGGTGGAGAT
AGGTGCAAGAGCATGAACCATTATCTCTGGAGCTTTATGTGTGCATTAGGCGAGGCACAA
TACTTGAACAGGACATTGATAATGGACTTAAGTATTTGTTTATCCAAGATATACACTTCA
TCCGGTGTAGACGAAGAAGGAAAGGATTTCAGGTTTTACTTCGACTTTGAGCATTTAAAG
GATTCAGCATCAGTTCTTGATCAGGAACAGTTTTGGGCTGATTGGGAAAAATGGCACCAA
AAAGATGGACTATCTCTCCATCTTGTTGAAGACTTTAGAGTTAATCCAATGAAGTTATCT
GGACTGAAGGATACTTTAATCGTGAGGAAATTTGGTAACGTGGAGCCAGATAATTACTGG
TACAGAGTATGTGAGGGTGAGACAGAATCTGTTGTTCAACGGCCATGGCATTTGGTATGG
AAGTCAAGACGTTTGATGGACATTGTCTCGGCTATTGCCTCTAGGTTGAACTGGGATTAT
GACTCAGTTCATGTTGTGAGAGGCGAGAAGGCAAGGAACCGTGAAATGTGGCCACATCTT
GCTGAAGATACTTCTCCAGATGCTCTTCTATCTAGTTTGCAAGACAAGATAGATGATGGA
AGGAACCTATATATCGCGACAAATGAACAAGAGACATCTTTTTTCAATCCTTTAAAGGAT
AAGTACTCTACACATTTCCTCAGTGACTATAGGGATCTTTGGGATGAAGGCAGTGAATGG
TATTTAGACACAGCAAAACTTCACAACGGAAGTCCTGTCGAATTTGATGGTTACATGAGA
GTTTCAGTTGACACTGAAGTTTTCTTGAGAGGTAAAAAGCAAATCGAGACATTTAACGAT
CTCACTAAAGACTGCAAGGATGGTATCAATACCTGCACTTCTTCCAGCTAA