Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400074170
CDS Infomation

pacid=37448611 polypeptide=PGSC0003DMP400050218 locus=PGSC0003DMG400028826 ID=PGSC0003DMT400074170.v4.03 annot-version=v4.03
Sequence

ATGCACATTGGTCTTCTAGCTGCAGCAGCTCATGCAACTGCAACAAATAGCCGGTTTACA
ATATTTTTCAATCCAAGGGCTTGTCCATCAGAGTTTGTCATACCTCTCGCCAAGTATGCT
AAAGCAGTGTATCATACACGAGTTTCTGTTGGCATGAGGTTCCGAATGCTATTTGAAACA
GAAGAATCGAGCATCCGTAGGTATATGGGAACAATTACTGGCATTGGTGATCTAGATCCT
GCTCGTTGGCCAAATTCTCATTGGCAGTCTGTAAAGGTTGGATGGGACGAATCAACTGCA
GGGGAGAGGCAGCCTAGAGTTTCACTGTGGGAAATTGAACCTCTGACAACCTTTCCAATG
TATCCATCTCCTTTCTCCCTTAGGTTGAAGCGGCCATGGCCACCTGGACTACCTTCATTT
CCTGGTCTATCAAATGGTGATATGACTATGAGTTCTCAACTTCCATGGCTGCACGGGGGC
ATGGGTGATCAGGGGATACAATCACTTAATTTCCAGGGATTTGGTGTTACTCCATTCGTG
CATCCAAGGTTTGATGCTTCTATGCTAGGTTTGCAGCCTGACATTTTGCAAGCGATGGCA
ACATTAGATTCTTCTAAGCTTGCAAATCAGCCACTTATGCAGTTCCAACATATCCCTAGT
GGTTCAGCATCTTCGATTCAGAATCAGCTTTTGCATCCATCCAATTTGCAACATACTTTC
CTCCAAGGCCTCCCGGAAAACCAACTAATATCTCAGGCACAGATGCTGCAGCAGCAATTG
CAGTGCCACCAATCTTATAATGCTCAGCAGCAACAGTTGCAGCGCCAGCAATTGTATCAT
GATCAACAACTTCAGGAACCCCATCAAGTACACTTGCAGCGTCAAGATCAGCAGCAAACC
AAGGCTCAATTGTGTTCAGCTACTCAGTCACAGCTATCTCATTTACAGGTCTTAGGTTCA
ACGGGTTCTCAACAAACATTTTCTGATTTAGTTGGTAATCATATTAATACATCTAACAAC
AGATCCACCATGCAAAGTCTCCTGAGTTCATTTTCCCGTAATGGAGCATCCACTTTCCTG
AACATGCCTGAAACCAACTCTCTAGTGTCTCCTTCCTCATCATCAAAGCGAATTGCTCTA
GAATCTCAGATCCCTTCACAAGCTCCATACATAGTGACACAGGCTGAAGTTTTGACGGTG
CCTAATACTAAGGTCTCAGATTTTTCCACTTTGTTTTCACCAAATCCTGGCAGACAAGTT
TTGGATTATCAAGCTGTAGCAGTTAGCCAAAACAATGCGCTATTTGGAGTTAATGGTATG
TCAAACCTGAAGGGTAACAGTCCGGAGAACAGATCTTTACCTATGCCTTATGCTACCTCT
GCCTTCACAAGTACAGTAGGTAGCGAGTATCCCGTTACTTCAGACATGACGACATCAAGT
TGTGTAGATGAATCAGGTGTCTTGCAGTCCTCAGAAAATGTGGATCAAGCAAACTCACTT
ACAGAAACCTTTGTTAAGGTTTACAAATCAGAGTCCTTTGGACGATCACTGGATATCTCC
AAATTTAGCAGCTATAATGAGCTGCGAAGTGAGCTTGCTCGCATGTTTGGCCTTGAAGGC
CTGTTGGAGGATCCTGAGAGATCAGGCTGGCAGCTTGTATTCGTTGACCGTGAGAATGAT
GTTCTCCTCCTTGGTGATGACCCTTGGCAGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400050218
PEP Infomation

pacid=37448611 transcript=PGSC0003DMT400074170 locus=PGSC0003DMG400028826 ID=PGSC0003DMT400074170.v4.03 annot-version=v4.03
Sequence

MHIGLLAAAAHATATNSRFTIFFNPRACPSEFVIPLAKYAKAVYHTRVSVGMRFRMLFET
EESSIRRYMGTITGIGDLDPARWPNSHWQSVKVGWDESTAGERQPRVSLWEIEPLTTFPM
YPSPFSLRLKRPWPPGLPSFPGLSNGDMTMSSQLPWLHGGMGDQGIQSLNFQGFGVTPFV
HPRFDASMLGLQPDILQAMATLDSSKLANQPLMQFQHIPSGSASSIQNQLLHPSNLQHTF
LQGLPENQLISQAQMLQQQLQCHQSYNAQQQQLQRQQLYHDQQLQEPHQVHLQRQDQQQT
KAQLCSATQSQLSHLQVLGSTGSQQTFSDLVGNHINTSNNRSTMQSLLSSFSRNGASTFL
NMPETNSLVSPSSSSKRIALESQIPSQAPYIVTQAEVLTVPNTKVSDFSTLFSPNPGRQV
LDYQAVAVSQNNALFGVNGMSNLKGNSPENRSLPMPYATSAFTSTVGSEYPVTSDMTTSS
CVDESGVLQSSENVDQANSLTETFVKVYKSESFGRSLDISKFSSYNELRSELARMFGLEG
LLEDPERSGWQLVFVDRENDVLLLGDDPWQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400074170
Transcript Infomation

pacid=37448611 locus=PGSC0003DMG400028826 ID=PGSC0003DMT400074170.v4.03 annot-version=v4.03
Sequence

ATGCACATTGGTCTTCTAGCTGCAGCAGCTCATGCAACTGCAACAAATAGCCGGTTTACA
ATATTTTTCAATCCAAGGGCTTGTCCATCAGAGTTTGTCATACCTCTCGCCAAGTATGCT
AAAGCAGTGTATCATACACGAGTTTCTGTTGGCATGAGGTTCCGAATGCTATTTGAAACA
GAAGAATCGAGCATCCGTAGGTATATGGGAACAATTACTGGCATTGGTGATCTAGATCCT
GCTCGTTGGCCAAATTCTCATTGGCAGTCTGTAAAGGTTGGATGGGACGAATCAACTGCA
GGGGAGAGGCAGCCTAGAGTTTCACTGTGGGAAATTGAACCTCTGACAACCTTTCCAATG
TATCCATCTCCTTTCTCCCTTAGGTTGAAGCGGCCATGGCCACCTGGACTACCTTCATTT
CCTGGTCTATCAAATGGTGATATGACTATGAGTTCTCAACTTCCATGGCTGCACGGGGGC
ATGGGTGATCAGGGGATACAATCACTTAATTTCCAGGGATTTGGTGTTACTCCATTCGTG
CATCCAAGGTTTGATGCTTCTATGCTAGGTTTGCAGCCTGACATTTTGCAAGCGATGGCA
ACATTAGATTCTTCTAAGCTTGCAAATCAGCCACTTATGCAGTTCCAACATATCCCTAGT
GGTTCAGCATCTTCGATTCAGAATCAGCTTTTGCATCCATCCAATTTGCAACATACTTTC
CTCCAAGGCCTCCCGGAAAACCAACTAATATCTCAGGCACAGATGCTGCAGCAGCAATTG
CAGTGCCACCAATCTTATAATGCTCAGCAGCAACAGTTGCAGCGCCAGCAATTGTATCAT
GATCAACAACTTCAGGAACCCCATCAAGTACACTTGCAGCGTCAAGATCAGCAGCAAACC
AAGGCTCAATTGTGTTCAGCTACTCAGTCACAGCTATCTCATTTACAGGTCTTAGGTTCA
ACGGGTTCTCAACAAACATTTTCTGATTTAGTTGGTAATCATATTAATACATCTAACAAC
AGATCCACCATGCAAAGTCTCCTGAGTTCATTTTCCCGTAATGGAGCATCCACTTTCCTG
AACATGCCTGAAACCAACTCTCTAGTGTCTCCTTCCTCATCATCAAAGCGAATTGCTCTA
GAATCTCAGATCCCTTCACAAGCTCCATACATAGTGACACAGGCTGAAGTTTTGACGGTG
CCTAATACTAAGGTCTCAGATTTTTCCACTTTGTTTTCACCAAATCCTGGCAGACAAGTT
TTGGATTATCAAGCTGTAGCAGTTAGCCAAAACAATGCGCTATTTGGAGTTAATGGTATG
TCAAACCTGAAGGGTAACAGTCCGGAGAACAGATCTTTACCTATGCCTTATGCTACCTCT
GCCTTCACAAGTACAGTAGGTAGCGAGTATCCCGTTACTTCAGACATGACGACATCAAGT
TGTGTAGATGAATCAGGTGTCTTGCAGTCCTCAGAAAATGTGGATCAAGCAAACTCACTT
ACAGAAACCTTTGTTAAGGTTTACAAATCAGAGTCCTTTGGACGATCACTGGATATCTCC
AAATTTAGCAGCTATAATGAGCTGCGAAGTGAGCTTGCTCGCATGTTTGGCCTTGAAGGC
CTGTTGGAGGATCCTGAGAGATCAGGCTGGCAGCTTGTATTCGTTGACCGTGAGAATGAT
GTTCTCCTCCTTGGTGATGACCCTTGGCAGTAA