Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400074135
CDS Infomation

pacid=37447015 polypeptide=PGSC0003DMP400050189 locus=PGSC0003DMG400028814 ID=PGSC0003DMT400074135.v4.03 annot-version=v4.03
Sequence

ATGGGAGGTGCAGAGGATGATGAACCACTCTCAAAACGTGTGAAAGTATCATTTGGAGAA
TCAGCTGATCATTCGAACGGGATATTTCTTAGGGATCCTGCAAGTTTCCCATTGAGTGAC
TTGATGGTTCGTCCTCTGGAATTTCAAGGGGACGATGAGATTGTTGGTAGAAAAGGAGTA
GTCAAGAAAGTTGAATTAGTTCAGATCATAGCCGAGGCGTTATATTCTCTTGGCTATAAG
AAGGCGGGGGCGCAGCTAGAGGAAGAGTCAGGAATACCTTTGCACCCCTCTTTAGTAAAT
TTATTTATGCAGCAAATCCTTGATGGGAGATGGGATGAAAGTATAGCCACATTGCATAAA
ATTGGTCTTGTGGATGAAAAAATTGTGAAGTTGGCATCTTTTATGATACTGGAGCAGAAG
TTCTTTGAACTGTTAGACAGAGAAAAAGTCATGGATGCTTTGAAGACATTGAGGACTGAA
ATTGCACCTCTTTGCATAAATAGCGATAGAGTCCGCAATCTTTCGTTGTGCATTCTATCA
CCTTCACAACAGGTTGTCTCTGGGGAGTCAGGTCCAGAAATAATGAAAATAAAATTAAGG
ACAAAACTACTAGAAGAACTGCAAGGACTGTTTCCCACAACAGTCATGCCTCCCGAAAAA
AGATTGATCCATCTGGTTGAACAGGGGCTTGAATTTCAACTGGGGTCTTGTTCTCTTCAC
AACTCATTAATCAATGACATGTCGTTGCTCACTGATCACCATTGTGGAATAGATCAGATT
CCATCTCAGACTTTGCAGATTTTAGAAGGACACAAAGATGAAGTCTGGTTTTTGGAGTTC
TCTCATAACGGGAAATACCTAGCCTCGTCATCTGCGGATTGTTCAGTAATTATATGGGAG
GTGAAGTTTGATGGAAGGTTATGCTTGAAGCACAAAGTTCTTGGTCATGAGGAACCTGTG
TGCTTTATATCATGGAGCCCTGATGACAGTAAGCTTCTCACCTGTGGAGTGGAAGAGGTT
GTTAGACTGTGGGATGTAGACTCCGGTGAGTGTATACATCTTTATGAGAAAAATGGTCTT
GGTTTGATTTCGTGTGGATGGGCTCCCGATGGGGAAAGGATATTTTGCGCTGTTACTGAC
AAAAGCATTAGCATGTGGGATCTTGAAGGGAAAGAGCTGCAGTGTTGGAAAGGCCATCGG
GTTACTAAAATAGCTGATTTGGGGATAACAAGTGATGGGAAACACATGGTCTCTGTTTGT
AAAGATAATGTGATACTGTTAGTTGGATTGGAATCAAAAACAGAGCAAATAATTCTAGAG
GATGAAGTAATAACTTCATTTGTATTGTCCGCAGACGGTAGATACATATTGATAAGTCTG
TTAAATCAAGAAATCCATCTTTGGAGTATAGATGGGATTATAAAACTCTTACACATCTAT
AAAGGCCATAAGCAAAAACGCTTCATCGTAAGGCCTTGCTTTGGTGGACTTCGTCAAGCT
TTCATCGCCAGTGGAAGTGAGGATTCACAGATATATATATGGCACAGATGCTCACAACAA
CTCCTCGGGAAGTTAGCTGGACATACTGGGACTGTCAACTGTGTTAGTTGGAACCCAGCA
AATCCTCATATGCTGGCATCAGGAGGTGATGATCGGACCATTCGCATATGGGGCTTGAAT
CCTGCAAACGTGATGAAGCACAATGACGAGGGAGCTGTAAGTAATGGTGTGAACGACTGC
AATTGCAGAACGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400050189
PEP Infomation

pacid=37447015 transcript=PGSC0003DMT400074135 locus=PGSC0003DMG400028814 ID=PGSC0003DMT400074135.v4.03 annot-version=v4.03
Sequence

MGGAEDDEPLSKRVKVSFGESADHSNGIFLRDPASFPLSDLMVRPLEFQGDDEIVGRKGV
VKKVELVQIIAEALYSLGYKKAGAQLEEESGIPLHPSLVNLFMQQILDGRWDESIATLHK
IGLVDEKIVKLASFMILEQKFFELLDREKVMDALKTLRTEIAPLCINSDRVRNLSLCILS
PSQQVVSGESGPEIMKIKLRTKLLEELQGLFPTTVMPPEKRLIHLVEQGLEFQLGSCSLH
NSLINDMSLLTDHHCGIDQIPSQTLQILEGHKDEVWFLEFSHNGKYLASSSADCSVIIWE
VKFDGRLCLKHKVLGHEEPVCFISWSPDDSKLLTCGVEEVVRLWDVDSGECIHLYEKNGL
GLISCGWAPDGERIFCAVTDKSISMWDLEGKELQCWKGHRVTKIADLGITSDGKHMVSVC
KDNVILLVGLESKTEQIILEDEVITSFVLSADGRYILISLLNQEIHLWSIDGIIKLLHIY
KGHKQKRFIVRPCFGGLRQAFIASGSEDSQIYIWHRCSQQLLGKLAGHTGTVNCVSWNPA
NPHMLASGGDDRTIRIWGLNPANVMKHNDEGAVSNGVNDCNCRT*

Transcript Sequence

Transcript ID

PGSC0003DMT400074135
Transcript Infomation

pacid=37447015 locus=PGSC0003DMG400028814 ID=PGSC0003DMT400074135.v4.03 annot-version=v4.03
Sequence

ATGGGAGGTGCAGAGGATGATGAACCACTCTCAAAACGTGTGAAAGTATCATTTGGAGAA
TCAGCTGATCATTCGAACGGGATATTTCTTAGGGATCCTGCAAGTTTCCCATTGAGTGAC
TTGATGGTTCGTCCTCTGGAATTTCAAGGGGACGATGAGATTGTTGGTAGAAAAGGAGTA
GTCAAGAAAGTTGAATTAGTTCAGATCATAGCCGAGGCGTTATATTCTCTTGGCTATAAG
AAGGCGGGGGCGCAGCTAGAGGAAGAGTCAGGAATACCTTTGCACCCCTCTTTAGTAAAT
TTATTTATGCAGCAAATCCTTGATGGGAGATGGGATGAAAGTATAGCCACATTGCATAAA
ATTGGTCTTGTGGATGAAAAAATTGTGAAGTTGGCATCTTTTATGATACTGGAGCAGAAG
TTCTTTGAACTGTTAGACAGAGAAAAAGTCATGGATGCTTTGAAGACATTGAGGACTGAA
ATTGCACCTCTTTGCATAAATAGCGATAGAGTCCGCAATCTTTCGTTGTGCATTCTATCA
CCTTCACAACAGGTTGTCTCTGGGGAGTCAGGTCCAGAAATAATGAAAATAAAATTAAGG
ACAAAACTACTAGAAGAACTGCAAGGACTGTTTCCCACAACAGTCATGCCTCCCGAAAAA
AGATTGATCCATCTGGTTGAACAGGGGCTTGAATTTCAACTGGGGTCTTGTTCTCTTCAC
AACTCATTAATCAATGACATGTCGTTGCTCACTGATCACCATTGTGGAATAGATCAGATT
CCATCTCAGACTTTGCAGATTTTAGAAGGACACAAAGATGAAGTCTGGTTTTTGGAGTTC
TCTCATAACGGGAAATACCTAGCCTCGTCATCTGCGGATTGTTCAGTAATTATATGGGAG
GTGAAGTTTGATGGAAGGTTATGCTTGAAGCACAAAGTTCTTGGTCATGAGGAACCTGTG
TGCTTTATATCATGGAGCCCTGATGACAGTAAGCTTCTCACCTGTGGAGTGGAAGAGGTT
GTTAGACTGTGGGATGTAGACTCCGGTGAGTGTATACATCTTTATGAGAAAAATGGTCTT
GGTTTGATTTCGTGTGGATGGGCTCCCGATGGGGAAAGGATATTTTGCGCTGTTACTGAC
AAAAGCATTAGCATGTGGGATCTTGAAGGGAAAGAGCTGCAGTGTTGGAAAGGCCATCGG
GTTACTAAAATAGCTGATTTGGGGATAACAAGTGATGGGAAACACATGGTCTCTGTTTGT
AAAGATAATGTGATACTGTTAGTTGGATTGGAATCAAAAACAGAGCAAATAATTCTAGAG
GATGAAGTAATAACTTCATTTGTATTGTCCGCAGACGGTAGATACATATTGATAAGTCTG
TTAAATCAAGAAATCCATCTTTGGAGTATAGATGGGATTATAAAACTCTTACACATCTAT
AAAGGCCATAAGCAAAAACGCTTCATCGTAAGGCCTTGCTTTGGTGGACTTCGTCAAGCT
TTCATCGCCAGTGGAAGTGAGGATTCACAGATATATATATGGCACAGATGCTCACAACAA
CTCCTCGGGAAGTTAGCTGGACATACTGGGACTGTCAACTGTGTTAGTTGGAACCCAGCA
AATCCTCATATGCTGGCATCAGGAGGTGATGATCGGACCATTCGCATATGGGGCTTGAAT
CCTGCAAACGTGATGAAGCACAATGACGAGGGAGCTGTAAGTAATGGTGTGAACGACTGC
AATTGCAGAACGTGA