Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400074125
CDS Infomation

pacid=37448683 polypeptide=PGSC0003DMP400050184 locus=PGSC0003DMG400028810 ID=PGSC0003DMT400074125.v4.03 annot-version=v4.03
Sequence

ATGGATTCTCAAAACAAGAGTAATCGTCAGGTGCAGAGAGCTCCTTGCTTCTCAAATGTT
GGACGGAGGAATGCGGCTTCACCATCTGTCATTGTAATAGGTGGTGGATTTGCAGGCCTT
GCAGCTGCTCGGACACTTTATGATGCATCATTTCAGGTGGTTGTTCTAGAATCACGAGAT
AGAATTGGAGGCCGTGTTCACACTGATTATTCTTTTGGTTTTCCTGTTGACTTGGGTGCA
TCATGGTTGCATGGCGTCGGCAACGAGAATCCTTTGGCACCTCTAATTGGAAAACTAGGA
CTGCCTCTCTATCGTACAAGTGGTGACAATTCAGTTTTGTACGACCATGACCTGGAAAGT
TATGGACTTTTTGACATGGAGGGTAATCAAGTTCCCCAGGACTTAGTCTCAAAGGTTGGC
GAGACTTTTGAGAGCATTTTGAAGGAGACTGATCTAATTAGGAAAGAAAACAGTGAAGAC
ATGTCTATCGGTCGTGCTATATCAATGGTTTTTGAAAGGAGACCTGATTTAAGGTTGAAT
GGCCTTGGTCATAAGGTGTTGCAGTGGTACCTATGCAGAATGGAAGGCTGGTTCGCTGCG
GATGCAGATACCATATCACTCAAGTGTTGGGACCAGGAAGAATTGCTTCCTGGTGGGCAT
GGTCTTATGGTTCGGGGATATAAGCCTGTCATCAATACACTAGCAAAAGGGCTTGACATT
CGCTTAGGTCACAGGGTTACAGAAATTGCTAGACGTTATAATGGCGTGAAGGTAACAGTT
GAGGATGGGAGTACTTTTGTAGCCGATGCTGCCATTATTGCTGTTCCTCTTGGTGTTCTG
AAATCAAATTGTATCAAGTTTGAACCTAGATTACCTGAGTGGAAAGAGGCTGCCATTAAA
GAACTTGGTGTAGGAATTGAGAACAAGATTATTCTGCACTTTCAAGACGTGTTCTGGCCA
AATGTTGAGTTCTTGGGAGTAGTTGCAGAAAGCTCATATGAGTGCAGTTACTTTCTTAAT
CTTCACAAAGCTACTGGCCATCCTGTCCTTGTTTATATGCCTGCTGGGCAACTGGCCCGT
GACATTGGAGAACTGTCTGATGAAGCTGCTGCTAATTTTGCATTTACTCAACTTAAGAGG
ATTCTTCCCAATGCGACTGCTCCTATTCAGTATCTTGTTTCTCACTGGGGTTCAGACATA
AACTCGCTGGGATCATATAGTTATGATACTGTTGGGATGCCCCATGATCTATATGAAAAG
CTTAGAATACCAGTAGATAGCCTATTCTTTGCTGGGGAGGCAACGAGTGCTGATTACCCA
GGTTCTGTACATGGTGCATATTCAACCGGATTGCTGGCTGCTGAGGACTGCAGGATGCGT
GTCCTGGAGCGACATGGAGAGTTGGATATTTTCCAGCCAGCCATGGATGAGGAAACACTT
ATTCCCATTTTGATATCCAGAATGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400050184
PEP Infomation

pacid=37448683 transcript=PGSC0003DMT400074125 locus=PGSC0003DMG400028810 ID=PGSC0003DMT400074125.v4.03 annot-version=v4.03
Sequence

MDSQNKSNRQVQRAPCFSNVGRRNAASPSVIVIGGGFAGLAAARTLYDASFQVVVLESRD
RIGGRVHTDYSFGFPVDLGASWLHGVGNENPLAPLIGKLGLPLYRTSGDNSVLYDHDLES
YGLFDMEGNQVPQDLVSKVGETFESILKETDLIRKENSEDMSIGRAISMVFERRPDLRLN
GLGHKVLQWYLCRMEGWFAADADTISLKCWDQEELLPGGHGLMVRGYKPVINTLAKGLDI
RLGHRVTEIARRYNGVKVTVEDGSTFVADAAIIAVPLGVLKSNCIKFEPRLPEWKEAAIK
ELGVGIENKIILHFQDVFWPNVEFLGVVAESSYECSYFLNLHKATGHPVLVYMPAGQLAR
DIGELSDEAAANFAFTQLKRILPNATAPIQYLVSHWGSDINSLGSYSYDTVGMPHDLYEK
LRIPVDSLFFAGEATSADYPGSVHGAYSTGLLAAEDCRMRVLERHGELDIFQPAMDEETL
IPILISRM*

Transcript Sequence

Transcript ID

PGSC0003DMT400074125
Transcript Infomation

pacid=37448683 locus=PGSC0003DMG400028810 ID=PGSC0003DMT400074125.v4.03 annot-version=v4.03
Sequence

ATGGATTCTCAAAACAAGAGTAATCGTCAGGTGCAGAGAGCTCCTTGCTTCTCAAATGTT
GGACGGAGGAATGCGGCTTCACCATCTGTCATTGTAATAGGTGGTGGATTTGCAGGCCTT
GCAGCTGCTCGGACACTTTATGATGCATCATTTCAGGTGGTTGTTCTAGAATCACGAGAT
AGAATTGGAGGCCGTGTTCACACTGATTATTCTTTTGGTTTTCCTGTTGACTTGGGTGCA
TCATGGTTGCATGGCGTCGGCAACGAGAATCCTTTGGCACCTCTAATTGGAAAACTAGGA
CTGCCTCTCTATCGTACAAGTGGTGACAATTCAGTTTTGTACGACCATGACCTGGAAAGT
TATGGACTTTTTGACATGGAGGGTAATCAAGTTCCCCAGGACTTAGTCTCAAAGGTTGGC
GAGACTTTTGAGAGCATTTTGAAGGAGACTGATCTAATTAGGAAAGAAAACAGTGAAGAC
ATGTCTATCGGTCGTGCTATATCAATGGTTTTTGAAAGGAGACCTGATTTAAGGTTGAAT
GGCCTTGGTCATAAGGTGTTGCAGTGGTACCTATGCAGAATGGAAGGCTGGTTCGCTGCG
GATGCAGATACCATATCACTCAAGTGTTGGGACCAGGAAGAATTGCTTCCTGGTGGGCAT
GGTCTTATGGTTCGGGGATATAAGCCTGTCATCAATACACTAGCAAAAGGGCTTGACATT
CGCTTAGGTCACAGGGTTACAGAAATTGCTAGACGTTATAATGGCGTGAAGGTAACAGTT
GAGGATGGGAGTACTTTTGTAGCCGATGCTGCCATTATTGCTGTTCCTCTTGGTGTTCTG
AAATCAAATTGTATCAAGTTTGAACCTAGATTACCTGAGTGGAAAGAGGCTGCCATTAAA
GAACTTGGTGTAGGAATTGAGAACAAGATTATTCTGCACTTTCAAGACGTGTTCTGGCCA
AATGTTGAGTTCTTGGGAGTAGTTGCAGAAAGCTCATATGAGTGCAGTTACTTTCTTAAT
CTTCACAAAGCTACTGGCCATCCTGTCCTTGTTTATATGCCTGCTGGGCAACTGGCCCGT
GACATTGGAGAACTGTCTGATGAAGCTGCTGCTAATTTTGCATTTACTCAACTTAAGAGG
ATTCTTCCCAATGCGACTGCTCCTATTCAGTATCTTGTTTCTCACTGGGGTTCAGACATA
AACTCGCTGGGATCATATAGTTATGATACTGTTGGGATGCCCCATGATCTATATGAAAAG
CTTAGAATACCAGTAGATAGCCTATTCTTTGCTGGGGAGGCAACGAGTGCTGATTACCCA
GGTTCTGTACATGGTGCATATTCAACCGGATTGCTGGCTGCTGAGGACTGCAGGATGCGT
GTCCTGGAGCGACATGGAGAGTTGGATATTTTCCAGCCAGCCATGGATGAGGAAACACTT
ATTCCCATTTTGATATCCAGAATGTAA