Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400074096
CDS Infomation

pacid=37453294 polypeptide=PGSC0003DMP400050161 locus=PGSC0003DMG402028796 ID=PGSC0003DMT400074096.v4.03 annot-version=v4.03
Sequence

ATGGGGGGTGGTAGTACATTCGTGGACGGAGTTCGTCGTTTGTTTCATCGTCGTTCAAGT
ACTACTACTACTATTACTACTATTGTTCATACCAATGCAGAACCGATCTTGAACAATCTT
GAAAAACCCATCAAGATTTCAGACTCACAATACCAACAAGAAGAAGAAGGAGAGCTTATC
GTTATTGAAGACTTTGACATTTCGGGTCTTAAGTTTATCAGAGTTCCTAAAAGGGTTGAT
TTCCCTTTTTCATCTGCTTCTTATCAAATGGATCATCACAGAAAGAACTCACAGGAGGCA
GAGTTCTTCACAGAATATGGAGAAGCAAGCAGATACCAAATTCAGGAAGTTATCGGCAAG
GGTAGCTATGGAGTTGTGGCCTCCGCTGTTGATACCAAAACTGGAGAAAGAGTTGCTATC
AAGAAGATTAATGACGTGTTTGAGCATGTCTCTGATGCCACTAGAATTTTAAGAGAAATT
AAGCTACTTCGGCTTCTACGACATCCTGATATCGTAGAAATAAAGCACATCATGTTGCCC
CCTTCTCGGCGAGAGTTTAAAGATATTTACGTCGTCTTTGAATTGATGGAGTCTGATCTC
CACCAGGTTATTAAGGCCAATGATGATCTTACACCTGAGCATTATCAGTTTTTCCTATAC
CAGCTTATGCGTGGATTAAAATATACTCATACTGCAAACGTTTTCCATCGAGATTTAAAG
CCGAAGAATATTCTTGCTAACGCTGACTGTAAATTGAAGATTTGTGACTTTGGGCTTGCT
CGTGTATCATTTAATGACACACCCTCAGCTATTTTCTGGACTGACTATGTAGCTACCCGA
TGGTATCGTGCTCCTGAGCTATGTGGCTCTTTTTTCTCTAAGTACACTCCTGCTATTGAT
ATTTGGAGCATAGGATGCATATTTGCAGAAATGCTCAATGGAAAACCATTATTTCCTGGA
AAGAATGTAGTGCATCAATTAGACCTTATGACTGATTTGCTGGGAACACCTCCTGCTGAA
ACCATTGCAAAGATTAGAAATGAAAAGGCAAGAAGATACCTCGGTAACATGCGGAAAAAA
CCACCAGTTCCATATGCACAAAAGTTTCCACATGCGGATCCTTTGGCTTTGCGCCTACTT
GAACGCATTCTTGCATTTGACCCTAAAGATCGACCATCTGCAGAGGAGGCTCTGGCTGAT
CCTTATTTCCGTAGTTTGTCGAATGTGGACCGTGAACCATCTACTCACCCAATATCAAAG
CTTGAGTTTGAATTTGAGAGGAGAAAGTTGGCAAAAGAAGATGTTAGAGAGCTCATTTAT
CGGGAGATTTTGGAATATCATCCTCAGATGCTTCAGGAGTATCATCGTGGCGGAGATCAG
ACTAGTGGGTTTATGTACCCAAGTGGTGTTGATCGGTTCAAGCGTCAATTTGCACATCTT
GAGGAGCATTATGGTAAAGGTGAACGAAGCACTCCACTTCAGAGGCAGCATGCTTCCTTG
CCTAGAGAGCGGGTTCCTGCACCAAAAGATGAAACCTCTTCCCAGAACATTGATTTTGAA
AAACGAACTTCAGCATCTGTTGCTTCAACTCTAGAGAGCCCACCAGGGCAGTCCGAGGGA
TCAGAGTACTCAGATGCTAATGTGCAAAATGGACCAAACAAAGCAAACTATAGTGCTCGT
AGCTTGCTGAAGAGCGCTAGTATCAGTGCTTCAAAGTGCGTCGTAGTTAAAAGAAGAAAT
GCAGAGGAAGAGGCAATTAAAGAGCAAACCGACGGTGTTGATGGTTTAGCTCAAAAACTT
GCTGATCTTCATGGCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400050161
PEP Infomation

pacid=37453294 transcript=PGSC0003DMT400074096 locus=PGSC0003DMG402028796 ID=PGSC0003DMT400074096.v4.03 annot-version=v4.03
Sequence

MGGGSTFVDGVRRLFHRRSSTTTTITTIVHTNAEPILNNLEKPIKISDSQYQQEEEGELI
VIEDFDISGLKFIRVPKRVDFPFSSASYQMDHHRKNSQEAEFFTEYGEASRYQIQEVIGK
GSYGVVASAVDTKTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLP
PSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLMRGLKYTHTANVFHRDLK
PKNILANADCKLKICDFGLARVSFNDTPSAIFWTDYVATRWYRAPELCGSFFSKYTPAID
IWSIGCIFAEMLNGKPLFPGKNVVHQLDLMTDLLGTPPAETIAKIRNEKARRYLGNMRKK
PPVPYAQKFPHADPLALRLLERILAFDPKDRPSAEEALADPYFRSLSNVDREPSTHPISK
LEFEFERRKLAKEDVRELIYREILEYHPQMLQEYHRGGDQTSGFMYPSGVDRFKRQFAHL
EEHYGKGERSTPLQRQHASLPRERVPAPKDETSSQNIDFEKRTSASVASTLESPPGQSEG
SEYSDANVQNGPNKANYSARSLLKSASISASKCVVVKRRNAEEEAIKEQTDGVDGLAQKL
ADLHG*

Transcript Sequence

Transcript ID

PGSC0003DMT400074096
Transcript Infomation

pacid=37453294 locus=PGSC0003DMG402028796 ID=PGSC0003DMT400074096.v4.03 annot-version=v4.03
Sequence

ATGGGGGGTGGTAGTACATTCGTGGACGGAGTTCGTCGTTTGTTTCATCGTCGTTCAAGT
ACTACTACTACTATTACTACTATTGTTCATACCAATGCAGAACCGATCTTGAACAATCTT
GAAAAACCCATCAAGATTTCAGACTCACAATACCAACAAGAAGAAGAAGGAGAGCTTATC
GTTATTGAAGACTTTGACATTTCGGGTCTTAAGTTTATCAGAGTTCCTAAAAGGGTTGAT
TTCCCTTTTTCATCTGCTTCTTATCAAATGGATCATCACAGAAAGAACTCACAGGAGGCA
GAGTTCTTCACAGAATATGGAGAAGCAAGCAGATACCAAATTCAGGAAGTTATCGGCAAG
GGTAGCTATGGAGTTGTGGCCTCCGCTGTTGATACCAAAACTGGAGAAAGAGTTGCTATC
AAGAAGATTAATGACGTGTTTGAGCATGTCTCTGATGCCACTAGAATTTTAAGAGAAATT
AAGCTACTTCGGCTTCTACGACATCCTGATATCGTAGAAATAAAGCACATCATGTTGCCC
CCTTCTCGGCGAGAGTTTAAAGATATTTACGTCGTCTTTGAATTGATGGAGTCTGATCTC
CACCAGGTTATTAAGGCCAATGATGATCTTACACCTGAGCATTATCAGTTTTTCCTATAC
CAGCTTATGCGTGGATTAAAATATACTCATACTGCAAACGTTTTCCATCGAGATTTAAAG
CCGAAGAATATTCTTGCTAACGCTGACTGTAAATTGAAGATTTGTGACTTTGGGCTTGCT
CGTGTATCATTTAATGACACACCCTCAGCTATTTTCTGGACTGACTATGTAGCTACCCGA
TGGTATCGTGCTCCTGAGCTATGTGGCTCTTTTTTCTCTAAGTACACTCCTGCTATTGAT
ATTTGGAGCATAGGATGCATATTTGCAGAAATGCTCAATGGAAAACCATTATTTCCTGGA
AAGAATGTAGTGCATCAATTAGACCTTATGACTGATTTGCTGGGAACACCTCCTGCTGAA
ACCATTGCAAAGATTAGAAATGAAAAGGCAAGAAGATACCTCGGTAACATGCGGAAAAAA
CCACCAGTTCCATATGCACAAAAGTTTCCACATGCGGATCCTTTGGCTTTGCGCCTACTT
GAACGCATTCTTGCATTTGACCCTAAAGATCGACCATCTGCAGAGGAGGCTCTGGCTGAT
CCTTATTTCCGTAGTTTGTCGAATGTGGACCGTGAACCATCTACTCACCCAATATCAAAG
CTTGAGTTTGAATTTGAGAGGAGAAAGTTGGCAAAAGAAGATGTTAGAGAGCTCATTTAT
CGGGAGATTTTGGAATATCATCCTCAGATGCTTCAGGAGTATCATCGTGGCGGAGATCAG
ACTAGTGGGTTTATGTACCCAAGTGGTGTTGATCGGTTCAAGCGTCAATTTGCACATCTT
GAGGAGCATTATGGTAAAGGTGAACGAAGCACTCCACTTCAGAGGCAGCATGCTTCCTTG
CCTAGAGAGCGGGTTCCTGCACCAAAAGATGAAACCTCTTCCCAGAACATTGATTTTGAA
AAACGAACTTCAGCATCTGTTGCTTCAACTCTAGAGAGCCCACCAGGGCAGTCCGAGGGA
TCAGAGTACTCAGATGCTAATGTGCAAAATGGACCAAACAAAGCAAACTATAGTGCTCGT
AGCTTGCTGAAGAGCGCTAGTATCAGTGCTTCAAAGTGCGTCGTAGTTAAAAGAAGAAAT
GCAGAGGAAGAGGCAATTAAAGAGCAAACCGACGGTGTTGATGGTTTAGCTCAAAAACTT
GCTGATCTTCATGGCTAA