Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400074094
CDS Infomation

pacid=37452868 polypeptide=PGSC0003DMP400050159 locus=PGSC0003DMG400028795 ID=PGSC0003DMT400074094.v4.03 annot-version=v4.03
Sequence

ATGTCGCAAGAATCACTAGTCCTCCGCGGCACCATGAAAGCCCACACTGACTGGGTCACT
GCTATTGCAACCCCAATTGACAACTCCGACATGATTGTCACCTCCTCCAGGGATAAGTCC
ATCATCGTCTGGTCTTTGACTAAAGACGGTTCACATTACGGTGTCCCTCGCCGCCGCCTT
ACCGGACACGGCCATTTCGTTGAAGATGTCGTGTTGTCGTCTGACGGCATGTTTGCACTC
TCCGGTTCATGGGACGGTGAGCTCCGTTTATGGGATCTTCAAGCTGGAACCACTGCTCGT
CGTTTCGTTGGACACACTAAAGATGTTCTCTCCGTTGCTTTCTCTGTTGACAACCGTCAG
ATTGTCTCTGCTTCCCGTGACAGGACCATCAAGCTCTGGAACACACTCGGTGAGTGCAAG
TACACAATTCAGGAACAGGATTCACACTCTGATTGGGTTTCTTGTGTCCGTTTTAGCCCA
AATAATCTTCAGCCCACTATTGTTTCTGGTTCATGGGATCGCACTGTGAAAATCTGGAAT
CTTACCAACTGTAAGCTCAGGTCCACTCTTGCGGGACACAGTGGGTATGTGAATACTGTG
GCTGTGTCTCCAGATGGTTCGTTGTGTGCTAGCGGAGGGAAAGATGGAGTCATATTGCTA
TGGGATTTGGCTGAAGGAAAGAAACTGTACTCTCTTGATGCTGGCTCCATTATCCACACC
CTCTGTTTTAGCCCGAATAGGTATTGGCTCTGTGCTGCTACTGAATCTAGTATCAAGATT
TGGGATTTGGAGAGCAAAAGCGTCGTGGTTGATCTTAAAGTTGATCTGAAACAAGAGAGT
GAAATGTTCGGAACTGCTGCTACCGATTCCAAAACCAAGGTCATATACTGCACCAGTTTG
AGCTGGAGTGCTGATGGAAGCACACTTTTCAGTGGCTATACAGATGGTCTGATTAGAGTT
TGGGGAATTGGGCGTTATTAG

Peptide Sequence

PEP ID

PGSC0003DMP400050159
PEP Infomation

pacid=37452868 transcript=PGSC0003DMT400074094 locus=PGSC0003DMG400028795 ID=PGSC0003DMT400074094.v4.03 annot-version=v4.03
Sequence

MSQESLVLRGTMKAHTDWVTAIATPIDNSDMIVTSSRDKSIIVWSLTKDGSHYGVPRRRL
TGHGHFVEDVVLSSDGMFALSGSWDGELRLWDLQAGTTARRFVGHTKDVLSVAFSVDNRQ
IVSASRDRTIKLWNTLGECKYTIQEQDSHSDWVSCVRFSPNNLQPTIVSGSWDRTVKIWN
LTNCKLRSTLAGHSGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLDAGSIIHT
LCFSPNRYWLCAATESSIKIWDLESKSVVVDLKVDLKQESEMFGTAATDSKTKVIYCTSL
SWSADGSTLFSGYTDGLIRVWGIGRY*

Transcript Sequence

Transcript ID

PGSC0003DMT400074094
Transcript Infomation

pacid=37452868 locus=PGSC0003DMG400028795 ID=PGSC0003DMT400074094.v4.03 annot-version=v4.03
Sequence

ATGTCGCAAGAATCACTAGTCCTCCGCGGCACCATGAAAGCCCACACTGACTGGGTCACT
GCTATTGCAACCCCAATTGACAACTCCGACATGATTGTCACCTCCTCCAGGGATAAGTCC
ATCATCGTCTGGTCTTTGACTAAAGACGGTTCACATTACGGTGTCCCTCGCCGCCGCCTT
ACCGGACACGGCCATTTCGTTGAAGATGTCGTGTTGTCGTCTGACGGCATGTTTGCACTC
TCCGGTTCATGGGACGGTGAGCTCCGTTTATGGGATCTTCAAGCTGGAACCACTGCTCGT
CGTTTCGTTGGACACACTAAAGATGTTCTCTCCGTTGCTTTCTCTGTTGACAACCGTCAG
ATTGTCTCTGCTTCCCGTGACAGGACCATCAAGCTCTGGAACACACTCGGTGAGTGCAAG
TACACAATTCAGGAACAGGATTCACACTCTGATTGGGTTTCTTGTGTCCGTTTTAGCCCA
AATAATCTTCAGCCCACTATTGTTTCTGGTTCATGGGATCGCACTGTGAAAATCTGGAAT
CTTACCAACTGTAAGCTCAGGTCCACTCTTGCGGGACACAGTGGGTATGTGAATACTGTG
GCTGTGTCTCCAGATGGTTCGTTGTGTGCTAGCGGAGGGAAAGATGGAGTCATATTGCTA
TGGGATTTGGCTGAAGGAAAGAAACTGTACTCTCTTGATGCTGGCTCCATTATCCACACC
CTCTGTTTTAGCCCGAATAGGTATTGGCTCTGTGCTGCTACTGAATCTAGTATCAAGATT
TGGGATTTGGAGAGCAAAAGCGTCGTGGTTGATCTTAAAGTTGATCTGAAACAAGAGAGT
GAAATGTTCGGAACTGCTGCTACCGATTCCAAAACCAAGGTCATATACTGCACCAGTTTG
AGCTGGAGTGCTGATGGAAGCACACTTTTCAGTGGCTATACAGATGGTCTGATTAGAGTT
TGGGGAATTGGGCGTTATTAG