Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400074061
CDS Infomation

pacid=37449893 polypeptide=PGSC0003DMP400050133 locus=PGSC0003DMG401028784 ID=PGSC0003DMT400074061.v4.03 annot-version=v4.03
Sequence

ATGGCAGCACCCGGAACACTTATTCCATCTGACACATCTGGAGTACATGGAGACTATGAA
GAATCTATTCTCTCCATCAGTCCATCCTCCAAAGATGTTGATTCTCATCCAGGTTCCTAT
AGTAGTGGGATTGCTTCTTCATTGGGAGATCATTCAGACTATGGAACGGCAGACAAGAGA
TCCAGGTTTGCGGAAAGCACTAGTGCAGGAAATGAATCTCCCTCTTCTGGTAATTCAGAA
CTGCAGGTAAAAGCGGAGAAAGAATTTTATAATACCTTCCATGATTTTACAAAGGCTCCC
AGTCCTAAGGAGCAAGGACAGGAAACATCTTCTAGAGCTGGGCATGCAAGATCTGCTTTT
ACACATGCAAGATCTCCTTCCTGGACAGAAGGTGTTAGCTCCCCAGCTGCACACAAGATG
AAAGTAAAGGATGCTTCGCAATACATGATTGACGCTGCCAAAGAAAATCCACAGCTAGCT
CAAAAACTGCACACTGTTTTACTTGAGAGTGGAGTTATTGCACCACCAAACCTGTTCGCT
GAGATCTATCCAGAACAACTAGACGTATCTCATATAGAGGGAAAATCCAGGCTAGAGGAA
AGAGATGAGTTCCAGAAAGTCAAGGGTCAATCTGATAAGAATCGAGCCCGCTTCTTACCC
CCTCTGCCTTATCACAGTCCATACTCTAAGGGCAATGCACGTGGATCATTGGAACCTCAG
CCAGATGTGAGAGAAGTTGGTGAACAGCAAGTTTCTAGACAGTCTGAAGTAGCTCCACCG
AAACATATGAAAACAGTTCCTGTTGCTGCTGCTGCTGCCGCCGCCGCAGCTGCTGTTGCC
TCTTCGATGGTAGTTGTTGCAGCCAAGACTAACCCTCACGGGGACCTCCCCGTAGCAGCT
GCTGCCACAGCCACAGCTGCAGCAGTGGTAGCAACAACTGCAGCAGTCAGTAAGCAATAT
GAGGCACAAGGAGACTGTGAAAGAGTTGATGGAGATGCAGATACTGCTGTTTATGAGCAA
CAGAGAAGTGGTCATCAAGAGCATGAGGCAGCAGGAGCAAATTCAGAGGGTGAAAGGATG
TCAGATAAGTCAACCGGTAATGATAGTGCTAAATCAGATGTGATACTTGATGATGTAGCA
GATTGTGAGATTCCGTGGGAGGATATTGCCTTGGGTGAGCGTATCGGACTTGGATCTTAT
GGAGAGGTCTATCGTGGAGAGTGGCATGGAACTGAAGTTGCTGTAAAGAAGTTCCTGGAT
CAAGATATAACTGGTGAATCCCTTGAGGAGTTCAGAAGTGAGGTGCGGATCATGAAAAGG
CTCAGACATCCAAATGTTGTTCTATTCATGGGAGCTGTTACTCGTTCTCCACATCTTTCA
ATTGTTACCGAGTTTCTTCATAGAGGTAGTTTGTACAGATTAATCCATCGACCCCACAAT
CAGCTAGATGAGCGCAGGAGGTTGAGGATGGCTCTTGATGCTGCTCGAGGGATGAACTAT
CTACACAACTGCACTCCCATGATAGTTCATCGAGATTTGAAGTCTCCAAATCTCCTTGTA
GATAAGAACTGGGTTGTGAAGGTATGTGATTTTGGACTGTCAAGAATGAAGCACAGCACA
TTTCTTTCTTCTAGGTCGACTGCTGGGACGGCAGAGTGGATGGCCCCAGAAGTGCTGAGA
AATGAACCTTCAAATGAAAAATGTGATGTATTTAGCTTCGGTGTCATACTATGGGAGCTT
TGTACTTTACAGCAACCATGGGGAGGAATGAATCCAATGCAAGTCGTTGGTGCTGTGGGG
TTTCAGCACCGCCGTCTTGACATACCAGATGACATGGATCCAGCTATTGCAGACATTATC
AGGAAATGCTGGCAAACAGATCCAAAGTTACGGCCTTCATTTGCTGAGATAATGGCTGCT
CTGAAACCACTACAAAAGCCTATTACTAGTTCACATGCACCAAAACCACCAGTTGCCAGA
GGTCAGCCATCCGCGGAGCAGGGTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400050133
PEP Infomation

pacid=37449893 transcript=PGSC0003DMT400074061 locus=PGSC0003DMG401028784 ID=PGSC0003DMT400074061.v4.03 annot-version=v4.03
Sequence

MAAPGTLIPSDTSGVHGDYEESILSISPSSKDVDSHPGSYSSGIASSLGDHSDYGTADKR
SRFAESTSAGNESPSSGNSELQVKAEKEFYNTFHDFTKAPSPKEQGQETSSRAGHARSAF
THARSPSWTEGVSSPAAHKMKVKDASQYMIDAAKENPQLAQKLHTVLLESGVIAPPNLFA
EIYPEQLDVSHIEGKSRLEERDEFQKVKGQSDKNRARFLPPLPYHSPYSKGNARGSLEPQ
PDVREVGEQQVSRQSEVAPPKHMKTVPVAAAAAAAAAAVASSMVVVAAKTNPHGDLPVAA
AATATAAAVVATTAAVSKQYEAQGDCERVDGDADTAVYEQQRSGHQEHEAAGANSEGERM
SDKSTGNDSAKSDVILDDVADCEIPWEDIALGERIGLGSYGEVYRGEWHGTEVAVKKFLD
QDITGESLEEFRSEVRIMKRLRHPNVVLFMGAVTRSPHLSIVTEFLHRGSLYRLIHRPHN
QLDERRRLRMALDAARGMNYLHNCTPMIVHRDLKSPNLLVDKNWVVKVCDFGLSRMKHST
FLSSRSTAGTAEWMAPEVLRNEPSNEKCDVFSFGVILWELCTLQQPWGGMNPMQVVGAVG
FQHRRLDIPDDMDPAIADIIRKCWQTDPKLRPSFAEIMAALKPLQKPITSSHAPKPPVAR
GQPSAEQG*

Transcript Sequence

Transcript ID

PGSC0003DMT400074061
Transcript Infomation

pacid=37449893 locus=PGSC0003DMG401028784 ID=PGSC0003DMT400074061.v4.03 annot-version=v4.03
Sequence

ATGGCAGCACCCGGAACACTTATTCCATCTGACACATCTGGAGTACATGGAGACTATGAA
GAATCTATTCTCTCCATCAGTCCATCCTCCAAAGATGTTGATTCTCATCCAGGTTCCTAT
AGTAGTGGGATTGCTTCTTCATTGGGAGATCATTCAGACTATGGAACGGCAGACAAGAGA
TCCAGGTTTGCGGAAAGCACTAGTGCAGGAAATGAATCTCCCTCTTCTGGTAATTCAGAA
CTGCAGGTAAAAGCGGAGAAAGAATTTTATAATACCTTCCATGATTTTACAAAGGCTCCC
AGTCCTAAGGAGCAAGGACAGGAAACATCTTCTAGAGCTGGGCATGCAAGATCTGCTTTT
ACACATGCAAGATCTCCTTCCTGGACAGAAGGTGTTAGCTCCCCAGCTGCACACAAGATG
AAAGTAAAGGATGCTTCGCAATACATGATTGACGCTGCCAAAGAAAATCCACAGCTAGCT
CAAAAACTGCACACTGTTTTACTTGAGAGTGGAGTTATTGCACCACCAAACCTGTTCGCT
GAGATCTATCCAGAACAACTAGACGTATCTCATATAGAGGGAAAATCCAGGCTAGAGGAA
AGAGATGAGTTCCAGAAAGTCAAGGGTCAATCTGATAAGAATCGAGCCCGCTTCTTACCC
CCTCTGCCTTATCACAGTCCATACTCTAAGGGCAATGCACGTGGATCATTGGAACCTCAG
CCAGATGTGAGAGAAGTTGGTGAACAGCAAGTTTCTAGACAGTCTGAAGTAGCTCCACCG
AAACATATGAAAACAGTTCCTGTTGCTGCTGCTGCTGCCGCCGCCGCAGCTGCTGTTGCC
TCTTCGATGGTAGTTGTTGCAGCCAAGACTAACCCTCACGGGGACCTCCCCGTAGCAGCT
GCTGCCACAGCCACAGCTGCAGCAGTGGTAGCAACAACTGCAGCAGTCAGTAAGCAATAT
GAGGCACAAGGAGACTGTGAAAGAGTTGATGGAGATGCAGATACTGCTGTTTATGAGCAA
CAGAGAAGTGGTCATCAAGAGCATGAGGCAGCAGGAGCAAATTCAGAGGGTGAAAGGATG
TCAGATAAGTCAACCGGTAATGATAGTGCTAAATCAGATGTGATACTTGATGATGTAGCA
GATTGTGAGATTCCGTGGGAGGATATTGCCTTGGGTGAGCGTATCGGACTTGGATCTTAT
GGAGAGGTCTATCGTGGAGAGTGGCATGGAACTGAAGTTGCTGTAAAGAAGTTCCTGGAT
CAAGATATAACTGGTGAATCCCTTGAGGAGTTCAGAAGTGAGGTGCGGATCATGAAAAGG
CTCAGACATCCAAATGTTGTTCTATTCATGGGAGCTGTTACTCGTTCTCCACATCTTTCA
ATTGTTACCGAGTTTCTTCATAGAGGTAGTTTGTACAGATTAATCCATCGACCCCACAAT
CAGCTAGATGAGCGCAGGAGGTTGAGGATGGCTCTTGATGCTGCTCGAGGGATGAACTAT
CTACACAACTGCACTCCCATGATAGTTCATCGAGATTTGAAGTCTCCAAATCTCCTTGTA
GATAAGAACTGGGTTGTGAAGGTATGTGATTTTGGACTGTCAAGAATGAAGCACAGCACA
TTTCTTTCTTCTAGGTCGACTGCTGGGACGGCAGAGTGGATGGCCCCAGAAGTGCTGAGA
AATGAACCTTCAAATGAAAAATGTGATGTATTTAGCTTCGGTGTCATACTATGGGAGCTT
TGTACTTTACAGCAACCATGGGGAGGAATGAATCCAATGCAAGTCGTTGGTGCTGTGGGG
TTTCAGCACCGCCGTCTTGACATACCAGATGACATGGATCCAGCTATTGCAGACATTATC
AGGAAATGCTGGCAAACAGATCCAAAGTTACGGCCTTCATTTGCTGAGATAATGGCTGCT
CTGAAACCACTACAAAAGCCTATTACTAGTTCACATGCACCAAAACCACCAGTTGCCAGA
GGTCAGCCATCCGCGGAGCAGGGTTAG