Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400074028
CDS Infomation

pacid=37480102 polypeptide=PGSC0003DMP400050108 locus=PGSC0003DMG400028773 ID=PGSC0003DMT400074028.v4.03 annot-version=v4.03
Sequence

ATGGCTATTAGAAATCTCTTAAGCTTCTGCATCTTTTTCCTTATAGCTCTTGCATATTTT
TTTCCTCTAACGAGCGCTGCAATTCCTGCAAAACGCTTTTATGCTCCATTTAATCGAACT
AGCTTCCCTCCTGATTTTGTTTTTGGCGCTTCATCAGCTGCTTATCAGATCGAAGGAGAG
GCGCTTAAAGGAGGAAGAGGACCAAGTATATGGGACACTTTCACTCGACAGCACCCAGAA
AAGATCTTTGATGCTTCTACAGCAGATGTGGCTGTTGATTTCTACCATCGCTATAAGGAA
GACATTCAACTGCTTAAGCAAGTGGGATTAAGAGCTTTCAGGATGTCTATCTCTTGGTCT
CGAATTTTACCATATGGTAAGGTTAGCAAAGGAGTGAATCCAGAAGGCATCAAATTCTAC
AATAATGTGTTCAACGAGCTAATCGCTAATGGTATAACTCCTTTTGTGACTCTATTCCAT
TGGGACACACCACAAGCCCTTGAAGACGAATACAAAGGGTTTCTCAGCTCAAAAATAGCG
AAAGATTATGGTGACTTTGTGGACATTTGCTTCAAAGAATTTGGGGATAGAGTAAAGCAT
TGGATAACTCTAAATGAACCACTTTCTTACAGCATGAATGGATATACAAAAGGAACCTTT
GCACCAGGAAGATGTTCTAAATATGTAGGTAATTGCACTGAGGGTAACTCTGCTACTGAG
CCATACATTGTTGCTCACAACTTGCTTCTAGCACATGCAACTGCTGTTAAGATCTATAGA
GATAAATATCAGAAAAGTCAGAAAGGGAAAATAGGAGTTACTCTGGTCACTCATATGTTT
GTGCCCAAAATCAATACACCTCAAGGACTCAAGGCCCCACTAAGAGCTCTTGATTTTATG
TTGGGATGGTTTTTGGATCCAATAACATATGGTGATTACCCGGCAAGCATGCGAGCTATG
GTAGGGCGTCGGCTCCCAAGATTCACAGTTGAGGAATCAAAGCTAGTGAAAGGTTCAATG
GATTTCTTAGGGTGTAATTACTATACCACATATTATGCTTCTCCATTGCTCTCTGTTAAT
AAAGTTAATCTCAGCTACACCACTGACAATCATGCTGATCTTTCACCATTAAAGGACGGA
AAACCTATTGGCACACCGACTGCCTTGGATTGGCTTTTCATTTATCCAAAAGGAATCTAT
GGTCTCATGCTTCACATCAAGGAAAAATATAACAATCCTCCCATTTACATCACTGAAAAT
GGGATGGCAGAAGCCAATAATAGCACAATGTCACTTAAAGAATCTTTGAATGACGACATG
AGGATAAAGTATTATGAGGGCCATCTATGGTTTCTATCAAAAGCTATACAGGCTGGAGCA
AACGTTAAAGGACATTTTGTGTGGTCGTTCTTAGATGATTATGAATGGGATGCTGGTTTC
ACTGTGCGGTTTGGCCTCACTTTTGTTGACTACAAGAATGGTCTTAAACGATACCATAAG
AAATCTTCTTATTGGTACAAGAAATTTCTATTGTACACTGGCCTATAA

Peptide Sequence

PEP ID

PGSC0003DMP400050108
PEP Infomation

pacid=37480102 transcript=PGSC0003DMT400074028 locus=PGSC0003DMG400028773 ID=PGSC0003DMT400074028.v4.03 annot-version=v4.03
Sequence

MAIRNLLSFCIFFLIALAYFFPLTSAAIPAKRFYAPFNRTSFPPDFVFGASSAAYQIEGE
ALKGGRGPSIWDTFTRQHPEKIFDASTADVAVDFYHRYKEDIQLLKQVGLRAFRMSISWS
RILPYGKVSKGVNPEGIKFYNNVFNELIANGITPFVTLFHWDTPQALEDEYKGFLSSKIA
KDYGDFVDICFKEFGDRVKHWITLNEPLSYSMNGYTKGTFAPGRCSKYVGNCTEGNSATE
PYIVAHNLLLAHATAVKIYRDKYQKSQKGKIGVTLVTHMFVPKINTPQGLKAPLRALDFM
LGWFLDPITYGDYPASMRAMVGRRLPRFTVEESKLVKGSMDFLGCNYYTTYYASPLLSVN
KVNLSYTTDNHADLSPLKDGKPIGTPTALDWLFIYPKGIYGLMLHIKEKYNNPPIYITEN
GMAEANNSTMSLKESLNDDMRIKYYEGHLWFLSKAIQAGANVKGHFVWSFLDDYEWDAGF
TVRFGLTFVDYKNGLKRYHKKSSYWYKKFLLYTGL*

Transcript Sequence

Transcript ID

PGSC0003DMT400074028
Transcript Infomation

pacid=37480102 locus=PGSC0003DMG400028773 ID=PGSC0003DMT400074028.v4.03 annot-version=v4.03
Sequence

ATGGCTATTAGAAATCTCTTAAGCTTCTGCATCTTTTTCCTTATAGCTCTTGCATATTTT
TTTCCTCTAACGAGCGCTGCAATTCCTGCAAAACGCTTTTATGCTCCATTTAATCGAACT
AGCTTCCCTCCTGATTTTGTTTTTGGCGCTTCATCAGCTGCTTATCAGATCGAAGGAGAG
GCGCTTAAAGGAGGAAGAGGACCAAGTATATGGGACACTTTCACTCGACAGCACCCAGAA
AAGATCTTTGATGCTTCTACAGCAGATGTGGCTGTTGATTTCTACCATCGCTATAAGGAA
GACATTCAACTGCTTAAGCAAGTGGGATTAAGAGCTTTCAGGATGTCTATCTCTTGGTCT
CGAATTTTACCATATGGTAAGGTTAGCAAAGGAGTGAATCCAGAAGGCATCAAATTCTAC
AATAATGTGTTCAACGAGCTAATCGCTAATGGTATAACTCCTTTTGTGACTCTATTCCAT
TGGGACACACCACAAGCCCTTGAAGACGAATACAAAGGGTTTCTCAGCTCAAAAATAGCG
AAAGATTATGGTGACTTTGTGGACATTTGCTTCAAAGAATTTGGGGATAGAGTAAAGCAT
TGGATAACTCTAAATGAACCACTTTCTTACAGCATGAATGGATATACAAAAGGAACCTTT
GCACCAGGAAGATGTTCTAAATATGTAGGTAATTGCACTGAGGGTAACTCTGCTACTGAG
CCATACATTGTTGCTCACAACTTGCTTCTAGCACATGCAACTGCTGTTAAGATCTATAGA
GATAAATATCAGAAAAGTCAGAAAGGGAAAATAGGAGTTACTCTGGTCACTCATATGTTT
GTGCCCAAAATCAATACACCTCAAGGACTCAAGGCCCCACTAAGAGCTCTTGATTTTATG
TTGGGATGGTTTTTGGATCCAATAACATATGGTGATTACCCGGCAAGCATGCGAGCTATG
GTAGGGCGTCGGCTCCCAAGATTCACAGTTGAGGAATCAAAGCTAGTGAAAGGTTCAATG
GATTTCTTAGGGTGTAATTACTATACCACATATTATGCTTCTCCATTGCTCTCTGTTAAT
AAAGTTAATCTCAGCTACACCACTGACAATCATGCTGATCTTTCACCATTAAAGGACGGA
AAACCTATTGGCACACCGACTGCCTTGGATTGGCTTTTCATTTATCCAAAAGGAATCTAT
GGTCTCATGCTTCACATCAAGGAAAAATATAACAATCCTCCCATTTACATCACTGAAAAT
GGGATGGCAGAAGCCAATAATAGCACAATGTCACTTAAAGAATCTTTGAATGACGACATG
AGGATAAAGTATTATGAGGGCCATCTATGGTTTCTATCAAAAGCTATACAGGCTGGAGCA
AACGTTAAAGGACATTTTGTGTGGTCGTTCTTAGATGATTATGAATGGGATGCTGGTTTC
ACTGTGCGGTTTGGCCTCACTTTTGTTGACTACAAGAATGGTCTTAAACGATACCATAAG
AAATCTTCTTATTGGTACAAGAAATTTCTATTGTACACTGGCCTATAA