Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400073984
CDS Infomation

pacid=37432124 polypeptide=PGSC0003DMP400050082 locus=PGSC0003DMG400028752 ID=PGSC0003DMT400073984.v4.03 annot-version=v4.03
Sequence

ATGAAGACATCTCAGGGGTGGCGTTTAGGCATGAAGGAGATGCAAATATTGTCTGCACCT
CGCCAGCGTGCTCAGTTAAAGAAACCGACATGGATAATCGTGTTGGTTTCTTTAGTTAGC
TTGTTCCTAATTTGTGCTTACGTTTACCCCCCTCAAGGTTCTGGTGCTTGTTATGTATTC
TCATTGAATGGTTGCAAGGGGCTTTCTGATTGGCTTCCACCTGCTCCTGCCAGAGAATTG
ACAGATGAAGAGCTTGCCTCCCATGTTGTAACTAATGAAATTCTGAACACACCCCCAGTT
GTACCAGAGAACCCCAAAATAGCATTTATGTTCTTGATACCTGGTGCATTGCCATTTGAA
AAACTCTGGGACAGATTTTTTCAGGGCCATGAAGGAAAATTTTCTGTCTATGTACATGCA
TCCAAGGACAAACCTGTACATTTTAGCCGTTACTTCGTCAATCGGGAAATCCGTAGTGAC
AAGGTAGTGTGGGGAAAGATTTCTATGGTTGATGCAGAGAGACGTCTTTTAGCATATGCG
CTGAAAGAGACTGACAATCAGCATTTTGTATTGCTTTCTGACAGTTGTATACCCCTGCGT
GATTTTGACTACGTCTACAACTACCTGATGTATACGAATATCAGTTTTGTAGACTGCTTT
GAGGATCCTGGTCCTCATGGGAGTGGAAGGTATTCTGAACATATGTTACCTGAAGTTGAA
AAGAAGCATTTTCGAAAGGGTGCACAGTGGTTCACAATGAAACGACAGCACGCCCTTGCA
GTTATGGCTGATAGTCTCTACTACAGAAAATTCAAGGACTACTGCAGGCCAAACATGGAG
GGTAATCGGAATTGCTATTCTGATGAGCACTATATACCAACCTTTTTCTACATGCTTGAT
CCAACTGGAATTTCGAATTGGTCAGTGACACATGTTGATTGGTCTGAAGGGAAATGGCAC
CCAAAATCATACGTGCGCAAAGATATTACATATGAGCTTATGAAAAACATAACATCTATT
TCAGAGAATGTGCATGTCACAAGCGATGCTAGGAAGGAAGTTCAAATTAATCCTTGTCTA
TGGAACGGAAATCAACGACCATGTTACTTGTTTGCAAGAAAATTCTTACCTGAAGCTCTA
GATAGCTTGTTGCAGCTTTACCCCAATTATACATCGATTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400050082
PEP Infomation

pacid=37432124 transcript=PGSC0003DMT400073984 locus=PGSC0003DMG400028752 ID=PGSC0003DMT400073984.v4.03 annot-version=v4.03
Sequence

MKTSQGWRLGMKEMQILSAPRQRAQLKKPTWIIVLVSLVSLFLICAYVYPPQGSGACYVF
SLNGCKGLSDWLPPAPARELTDEELASHVVTNEILNTPPVVPENPKIAFMFLIPGALPFE
KLWDRFFQGHEGKFSVYVHASKDKPVHFSRYFVNREIRSDKVVWGKISMVDAERRLLAYA
LKETDNQHFVLLSDSCIPLRDFDYVYNYLMYTNISFVDCFEDPGPHGSGRYSEHMLPEVE
KKHFRKGAQWFTMKRQHALAVMADSLYYRKFKDYCRPNMEGNRNCYSDEHYIPTFFYMLD
PTGISNWSVTHVDWSEGKWHPKSYVRKDITYELMKNITSISENVHVTSDARKEVQINPCL
WNGNQRPCYLFARKFLPEALDSLLQLYPNYTSI*

Transcript Sequence

Transcript ID

PGSC0003DMT400073984
Transcript Infomation

pacid=37432124 locus=PGSC0003DMG400028752 ID=PGSC0003DMT400073984.v4.03 annot-version=v4.03
Sequence

ATGAAGACATCTCAGGGGTGGCGTTTAGGCATGAAGGAGATGCAAATATTGTCTGCACCT
CGCCAGCGTGCTCAGTTAAAGAAACCGACATGGATAATCGTGTTGGTTTCTTTAGTTAGC
TTGTTCCTAATTTGTGCTTACGTTTACCCCCCTCAAGGTTCTGGTGCTTGTTATGTATTC
TCATTGAATGGTTGCAAGGGGCTTTCTGATTGGCTTCCACCTGCTCCTGCCAGAGAATTG
ACAGATGAAGAGCTTGCCTCCCATGTTGTAACTAATGAAATTCTGAACACACCCCCAGTT
GTACCAGAGAACCCCAAAATAGCATTTATGTTCTTGATACCTGGTGCATTGCCATTTGAA
AAACTCTGGGACAGATTTTTTCAGGGCCATGAAGGAAAATTTTCTGTCTATGTACATGCA
TCCAAGGACAAACCTGTACATTTTAGCCGTTACTTCGTCAATCGGGAAATCCGTAGTGAC
AAGGTAGTGTGGGGAAAGATTTCTATGGTTGATGCAGAGAGACGTCTTTTAGCATATGCG
CTGAAAGAGACTGACAATCAGCATTTTGTATTGCTTTCTGACAGTTGTATACCCCTGCGT
GATTTTGACTACGTCTACAACTACCTGATGTATACGAATATCAGTTTTGTAGACTGCTTT
GAGGATCCTGGTCCTCATGGGAGTGGAAGGTATTCTGAACATATGTTACCTGAAGTTGAA
AAGAAGCATTTTCGAAAGGGTGCACAGTGGTTCACAATGAAACGACAGCACGCCCTTGCA
GTTATGGCTGATAGTCTCTACTACAGAAAATTCAAGGACTACTGCAGGCCAAACATGGAG
GGTAATCGGAATTGCTATTCTGATGAGCACTATATACCAACCTTTTTCTACATGCTTGAT
CCAACTGGAATTTCGAATTGGTCAGTGACACATGTTGATTGGTCTGAAGGGAAATGGCAC
CCAAAATCATACGTGCGCAAAGATATTACATATGAGCTTATGAAAAACATAACATCTATT
TCAGAGAATGTGCATGTCACAAGCGATGCTAGGAAGGAAGTTCAAATTAATCCTTGTCTA
TGGAACGGAAATCAACGACCATGTTACTTGTTTGCAAGAAAATTCTTACCTGAAGCTCTA
GATAGCTTGTTGCAGCTTTACCCCAATTATACATCGATTTAA