Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400073957
CDS Infomation

pacid=37431232 polypeptide=PGSC0003DMP400050063 locus=PGSC0003DMG400028740 ID=PGSC0003DMT400073957.v4.03 annot-version=v4.03
Sequence

ATGATGCCTGGAAAAACAGATAAAGATATGCATAAAGCAGTTGCGAGCTCATCACAAGTA
AAAAATGTGTTGAGAAGATTAGAAAAAAAGAGATCTAGGCTGAAATCAAAATCTCATGGA
AGGTCTACTCATGCATCTTTGTCAAGGAGAACAGTTGCCAGTGATGGTAAGGGAAAGTGC
TGTTCTGGGGAAAACATACTTAAGAAAGAAATTCTGAAAAAAGCTAAATCATCAAAGAAG
CAGTCCGTATTGAGCTGTGAAGGAGAGAAGCTTCAAGCATGCAACTCAAAGGACAACTTA
AAACATGATAACCTGGATACTGGGTCTGAAAAGTTAAAGAGAAGAAGAAAAAGGAGGAGA
AGAAAACATAACTCAGATCCAGATGATGTTTCACGTTTACAAAGGAGGACGAGATACCTC
TTGATCAAGATGAAGCTAGAGCAGAACCTTATTGATGCTTATTCTGCAGAAGGCTGGAAA
GGTCAGAGTCGAGAAAAAATTAGGCCAGAAAGAGAACTACAAAGAGCAAAGAAGCAAATA
TTAAACTGCAAGCTTGGAATAAGGGAGATAGTTCACCATCTGGATTTGCTTAGCTCTGCT
GGGCAGATCGATGATTCTGCTATTGCTCCAGACGGATCTGTCCATCATGAACATATTATC
TGTGCCAAATGCAAATTGCAAGAAGCTTTTCCTGACAATGATATCATACTTTGTGATGGT
ACATGCAACTGCGCCTTCCATCAAGAATGTCTTGATCCTCCACTATCAACTGAAAATATA
CCGCCAGATGATGAAGGCTGGTTTTGCAAATTTTGCAAGTGTAAGATGGAAATAATAGAA
GCAACAAATGCTCATATTGGCACCCACTTTGCTATGGATAGTAACTGGGAGAATATCTTC
AAGGAAGAGGCTCTTCTGCCCGAAGGTGAGGAGTCCTTGTTATGCCCCGAACAAGACTGG
CCATCTGATGACTCCGAAGATGATGACTATGATCCCGAAAAAGTTGCTAATAGTCACAGT
AGTACTGATAGCTTTGAGAGTGGTTCTTCCAGTGAAGCAAGCAGTGGAAGCATGTTAGGA
TCACTTGAGGATGAATTGTTAGCTTTAACAGGAAAGCTAGAAGATGGCAGCGGTGGAAAA
GATTATTTGTCTGAACAGATTGCTGGGTCAGATTATGAGGAGACAACTGACTTCGAAGTT
CTATCTGGTCCCAGACAGAGAAAAGCTGTTGACTATATTAAGTTAAATGATGAAATGTTT
GGAAAGCATGCTCCCGCGATCGAGCAAAATAGTGAAGACGAAGATTGGGGTCCAGGTAAA
AGAAAGCGTAGACGGAAGGAGCCTGAATCAGATGCTGCAAGCACCCTTATAACCCTTTTT
GAAAGCGAGAGAAGTTGTCCAGAAAAAACAGTGGATGAAGTGGAAAAAGAGTCTTTGGGT
AGACCAGCCAAGAGAGAAATATTCAGGATTCCTCCTGATGCAGTTGAGGAACTTCGCCGT
GTATTTGCTGAGAATGAACTTCCATCTAGAGAAGTACGGGAGAACCTCTCCAAGCAGCTG
GGTATTGAATTTGAGAAGGTGAACAAATGGTTCAAGAATGCACGGTATACGGCCCTTAAA
GCTAGAAAGGTTGAGGGCACAAAACCGTGTCAAGCTACTAGTCCTACAACATCAGTAGGA
TGTACACCTGAGACTGTAAAGGGTGAACCAGCAGATCATATTTCGTCAAGTGATGCAGAA
GAAAATGCAGCCCAGACACCTAATGAAGAAACTCCCAACTTGGTTATCCGTCCTTCCAAG
AAAAAGCATGACAAAAAAGCAGTAATAACATCAACAGATAGAGCAGAGACACTAGTAGAA
TCTGGCGATGACGTGAGCCTGAAACTACTGCGAGACAGAGCAAAAAAACAAAGGAGAAAA
ATCAATTCCAAGGAGAGGGAAAAGATAAAAGAAGCTGAAGCTGAAGCTGAGATGCAGGAG
CTTTGTAGAATCAAGGATAAAATAGCAAGACTCCAGGACGTTTTACGAAGGTTTCCAAAT
CGCAGATGTAGAAGAGCGGACACTTCTAGTTTAGATGAATCATTGGTTGTCTTTATACCT
GTTGCACAGTTACAGGAGAAAAGGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400050063
PEP Infomation

pacid=37431232 transcript=PGSC0003DMT400073957 locus=PGSC0003DMG400028740 ID=PGSC0003DMT400073957.v4.03 annot-version=v4.03
Sequence

MMPGKTDKDMHKAVASSSQVKNVLRRLEKKRSRLKSKSHGRSTHASLSRRTVASDGKGKC
CSGENILKKEILKKAKSSKKQSVLSCEGEKLQACNSKDNLKHDNLDTGSEKLKRRRKRRR
RKHNSDPDDVSRLQRRTRYLLIKMKLEQNLIDAYSAEGWKGQSREKIRPERELQRAKKQI
LNCKLGIREIVHHLDLLSSAGQIDDSAIAPDGSVHHEHIICAKCKLQEAFPDNDIILCDG
TCNCAFHQECLDPPLSTENIPPDDEGWFCKFCKCKMEIIEATNAHIGTHFAMDSNWENIF
KEEALLPEGEESLLCPEQDWPSDDSEDDDYDPEKVANSHSSTDSFESGSSSEASSGSMLG
SLEDELLALTGKLEDGSGGKDYLSEQIAGSDYEETTDFEVLSGPRQRKAVDYIKLNDEMF
GKHAPAIEQNSEDEDWGPGKRKRRRKEPESDAASTLITLFESERSCPEKTVDEVEKESLG
RPAKREIFRIPPDAVEELRRVFAENELPSREVRENLSKQLGIEFEKVNKWFKNARYTALK
ARKVEGTKPCQATSPTTSVGCTPETVKGEPADHISSSDAEENAAQTPNEETPNLVIRPSK
KKHDKKAVITSTDRAETLVESGDDVSLKLLRDRAKKQRRKINSKEREKIKEAEAEAEMQE
LCRIKDKIARLQDVLRRFPNRRCRRADTSSLDESLVVFIPVAQLQEKR*

Transcript Sequence

Transcript ID

PGSC0003DMT400073957
Transcript Infomation

pacid=37431232 locus=PGSC0003DMG400028740 ID=PGSC0003DMT400073957.v4.03 annot-version=v4.03
Sequence

ATGATGCCTGGAAAAACAGATAAAGATATGCATAAAGCAGTTGCGAGCTCATCACAAGTA
AAAAATGTGTTGAGAAGATTAGAAAAAAAGAGATCTAGGCTGAAATCAAAATCTCATGGA
AGGTCTACTCATGCATCTTTGTCAAGGAGAACAGTTGCCAGTGATGGTAAGGGAAAGTGC
TGTTCTGGGGAAAACATACTTAAGAAAGAAATTCTGAAAAAAGCTAAATCATCAAAGAAG
CAGTCCGTATTGAGCTGTGAAGGAGAGAAGCTTCAAGCATGCAACTCAAAGGACAACTTA
AAACATGATAACCTGGATACTGGGTCTGAAAAGTTAAAGAGAAGAAGAAAAAGGAGGAGA
AGAAAACATAACTCAGATCCAGATGATGTTTCACGTTTACAAAGGAGGACGAGATACCTC
TTGATCAAGATGAAGCTAGAGCAGAACCTTATTGATGCTTATTCTGCAGAAGGCTGGAAA
GGTCAGAGTCGAGAAAAAATTAGGCCAGAAAGAGAACTACAAAGAGCAAAGAAGCAAATA
TTAAACTGCAAGCTTGGAATAAGGGAGATAGTTCACCATCTGGATTTGCTTAGCTCTGCT
GGGCAGATCGATGATTCTGCTATTGCTCCAGACGGATCTGTCCATCATGAACATATTATC
TGTGCCAAATGCAAATTGCAAGAAGCTTTTCCTGACAATGATATCATACTTTGTGATGGT
ACATGCAACTGCGCCTTCCATCAAGAATGTCTTGATCCTCCACTATCAACTGAAAATATA
CCGCCAGATGATGAAGGCTGGTTTTGCAAATTTTGCAAGTGTAAGATGGAAATAATAGAA
GCAACAAATGCTCATATTGGCACCCACTTTGCTATGGATAGTAACTGGGAGAATATCTTC
AAGGAAGAGGCTCTTCTGCCCGAAGGTGAGGAGTCCTTGTTATGCCCCGAACAAGACTGG
CCATCTGATGACTCCGAAGATGATGACTATGATCCCGAAAAAGTTGCTAATAGTCACAGT
AGTACTGATAGCTTTGAGAGTGGTTCTTCCAGTGAAGCAAGCAGTGGAAGCATGTTAGGA
TCACTTGAGGATGAATTGTTAGCTTTAACAGGAAAGCTAGAAGATGGCAGCGGTGGAAAA
GATTATTTGTCTGAACAGATTGCTGGGTCAGATTATGAGGAGACAACTGACTTCGAAGTT
CTATCTGGTCCCAGACAGAGAAAAGCTGTTGACTATATTAAGTTAAATGATGAAATGTTT
GGAAAGCATGCTCCCGCGATCGAGCAAAATAGTGAAGACGAAGATTGGGGTCCAGGTAAA
AGAAAGCGTAGACGGAAGGAGCCTGAATCAGATGCTGCAAGCACCCTTATAACCCTTTTT
GAAAGCGAGAGAAGTTGTCCAGAAAAAACAGTGGATGAAGTGGAAAAAGAGTCTTTGGGT
AGACCAGCCAAGAGAGAAATATTCAGGATTCCTCCTGATGCAGTTGAGGAACTTCGCCGT
GTATTTGCTGAGAATGAACTTCCATCTAGAGAAGTACGGGAGAACCTCTCCAAGCAGCTG
GGTATTGAATTTGAGAAGGTGAACAAATGGTTCAAGAATGCACGGTATACGGCCCTTAAA
GCTAGAAAGGTTGAGGGCACAAAACCGTGTCAAGCTACTAGTCCTACAACATCAGTAGGA
TGTACACCTGAGACTGTAAAGGGTGAACCAGCAGATCATATTTCGTCAAGTGATGCAGAA
GAAAATGCAGCCCAGACACCTAATGAAGAAACTCCCAACTTGGTTATCCGTCCTTCCAAG
AAAAAGCATGACAAAAAAGCAGTAATAACATCAACAGATAGAGCAGAGACACTAGTAGAA
TCTGGCGATGACGTGAGCCTGAAACTACTGCGAGACAGAGCAAAAAAACAAAGGAGAAAA
ATCAATTCCAAGGAGAGGGAAAAGATAAAAGAAGCTGAAGCTGAAGCTGAGATGCAGGAG
CTTTGTAGAATCAAGGATAAAATAGCAAGACTCCAGGACGTTTTACGAAGGTTTCCAAAT
CGCAGATGTAGAAGAGCGGACACTTCTAGTTTAGATGAATCATTGGTTGTCTTTATACCT
GTTGCACAGTTACAGGAGAAAAGGTGA