Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400073949
CDS Infomation

pacid=37431377 polypeptide=PGSC0003DMP400050057 locus=PGSC0003DMG400028737 ID=PGSC0003DMT400073949.v4.03 annot-version=v4.03
Sequence

ATGGGAGAGATGTGGTTTAGTGTTGTTATTGTCTTGTTATTCAGTATCTTGAATGTTGGG
AAGGCTGAAATCTACATAGTGACAGTTGAAGGAGAGCCTGTCATAAGCTATAAAGGTGGC
ATTGATGGTTTTGAAGCCACTGCTGCAGAGTCTGATGAAAAAATTGATACCACTAGTGAA
TCGGTTACATCCTATGCCCAACATTTGGAAAAGAAGCATGATATGCTTCTAGCTTTGCTA
TTTGACCGTGGGACCTACAAGAAAATCTACAGCTACCGTCATCTAATTAATGGCTTCGCA
GCTCATATTTCACATGAGCAGGCAGAAATCCTCAGACGAGCTCCTGGTGTGAAGTCTGTG
GAGAGAGATTGGAAGGTGAAGAGACTTACAACTCACACGCCACAGTTTTTGGGGCTTCCT
ACAGGAGTTTGGCCGACAGGTGGTGGATTTGACCGGGCAGGCGAGGATATCATAATAGGT
TTCATCGACTCTGGCATCTATCCACACCATCCAAGCTTTGCAAGCCACAACACTGAGCCC
TATGGACCACTTCCAAAATATAGAGGAAAATGTGAAATTGATCCTAACACCAAGAAAGAC
TATTGCAATGGGAAGATTATAGGTGCTCAACATTTTGCGGAAGCTGCAAAAGCAGCTGGT
TCATTTAATCCTGCAATTGATTTTGATTCTCCTCTAGACGGTGACGGACACGGAAGCCAC
ACAGCAGCTATCGCTGCTGGAAACAATGGGATTCCTGTCAGAATGCATGGATTTGAGTTC
GGAAGAGCAAGTGGTATGGCACCTCGTGCGAGAATTGCTGTATACAAGGCACTATATAGG
CTATTTGGAGGGTTTGTTGCAGATGTAGTTGCTGCTATTGAACAGGCTGTTCATGATGGT
GTGGACATTCTTAATCTCTCTGTGGGGCCAAACAGTCCACCGGCAACTACAAAGACAACA
TTTTTGAACCCTTTTGATGCTACACTTCTTTCAGCTGTGAAAGCCGGTGTATTTATTGCA
CAGGCTGCTGGAAACGGAGGTCCTTTCCCCAAAACTTTGTTGTCTTATAGTCCATGGATA
GCAACAGTGGCTGCTGCAGTTGATGATCGTAGATACAAAAATCATTTGACATTAGGAAAT
GGGAAAGTCTTAGCTGGACTCGGTCTATCACCTTCCACACATCCGAACCGGACATTCACT
ATGGTAGCAGCAAATGATGTTCTTTTGGATTCGTCGGTTACTAAGTACAGTCCTGCTGAT
TGTCAAAGGCCAGAAGTTTTAAACAAGAATTTGGTGGAGGGAAACATCCTTCTTTGTGGC
TATTCTTTCAATTTCGTAGTTGGCACAGCATCGATTAAAAAAGCCGCGGAAACAGCAAAA
GCTCTTGGTGCTGCTGGCTTCGTTCTTGCTGTAGAAAATGCTTCACCAGGAACAAAATTT
GACCCGGTTCCTGTTAGAATTCCTGGGATTCTTATAACAGATGTTTCCATGTCAATGGAG
CTTGTAAACTACTACAACATCACCACTTCAAGAGATTGGACTGGACGTGTTAAGAGCTTT
AAATCAACAGGAAGCATTGGGAATGGGTTGAGGCCAATACTCCACAAATCTGCACCTCAA
GTAGCTGTCTTCTCTGCTAGAGGACCTAATATCAAAGATTACAGCTTTCAAGATGCTGAT
CTCCTGAAACCCGATATACTGGCTCCTGGTTCTCTTATTTGGGCTGCCTGGGCTCCCAAT
GGGACAGATGAAGCCAACTATTGTGGTGAAGGATTTGCATTGATCTCTGGAACTAGCATG
GCAGCACCCCATATAGCAGGAATAGCAGCCCTTATCAAGCAGCACCACCCTCATTGGAGC
CCTGCTGCTATTAAATCAGCATTGATGACAACTTCATCAACCATTGATAGGGCGGAGAGA
CCGCTTCAAGCACAACAGTATTCTGGATCTGAGACCTTGATGCTTGTTCCAGCTACTCCA
TTTGACTATGGAAGTGGACATGTTAATCCTAGAGCAGCTCTGGATCCCGGACTCATTTTT
GATGCAGGTTATCAAGATTATTTGGGGTTCTTGTGCACTGTGCCTGGAATTGATGCTCAG
GAAATAAAGAAGTTCACGCATTCCCCATGCAACTACACCCTTGGTCACCCATCAAATTTC
AACTCACCCTCAATTGCAGTTTCACACCTTGTGGGAACACAAATAATCACACGTATAGTG
ACAAATGTTGCTGAGGAAGAAACATATGTTGTAACAGCAAGAATGGCTCCAGAAATTGCC
ATTGAAACTAATCCTCCTGCAATGACTTTAAGGCACGGTGCATCAAGGAAATTCACGGTA
ACTCTCACTGTCCGATCAGTAACAGGAGCCTATAGTTTTGGAGAGGTTTTACTGAAAGGT
AGCAGAGGTCACAAAGTCAGGATCCCTGTTGCAGCTATGGGTTATGATCGATAG

Peptide Sequence

PEP ID

PGSC0003DMP400050057
PEP Infomation

pacid=37431377 transcript=PGSC0003DMT400073949 locus=PGSC0003DMG400028737 ID=PGSC0003DMT400073949.v4.03 annot-version=v4.03
Sequence

MGEMWFSVVIVLLFSILNVGKAEIYIVTVEGEPVISYKGGIDGFEATAAESDEKIDTTSE
SVTSYAQHLEKKHDMLLALLFDRGTYKKIYSYRHLINGFAAHISHEQAEILRRAPGVKSV
ERDWKVKRLTTHTPQFLGLPTGVWPTGGGFDRAGEDIIIGFIDSGIYPHHPSFASHNTEP
YGPLPKYRGKCEIDPNTKKDYCNGKIIGAQHFAEAAKAAGSFNPAIDFDSPLDGDGHGSH
TAAIAAGNNGIPVRMHGFEFGRASGMAPRARIAVYKALYRLFGGFVADVVAAIEQAVHDG
VDILNLSVGPNSPPATTKTTFLNPFDATLLSAVKAGVFIAQAAGNGGPFPKTLLSYSPWI
ATVAAAVDDRRYKNHLTLGNGKVLAGLGLSPSTHPNRTFTMVAANDVLLDSSVTKYSPAD
CQRPEVLNKNLVEGNILLCGYSFNFVVGTASIKKAAETAKALGAAGFVLAVENASPGTKF
DPVPVRIPGILITDVSMSMELVNYYNITTSRDWTGRVKSFKSTGSIGNGLRPILHKSAPQ
VAVFSARGPNIKDYSFQDADLLKPDILAPGSLIWAAWAPNGTDEANYCGEGFALISGTSM
AAPHIAGIAALIKQHHPHWSPAAIKSALMTTSSTIDRAERPLQAQQYSGSETLMLVPATP
FDYGSGHVNPRAALDPGLIFDAGYQDYLGFLCTVPGIDAQEIKKFTHSPCNYTLGHPSNF
NSPSIAVSHLVGTQIITRIVTNVAEEETYVVTARMAPEIAIETNPPAMTLRHGASRKFTV
TLTVRSVTGAYSFGEVLLKGSRGHKVRIPVAAMGYDR*

Transcript Sequence

Transcript ID

PGSC0003DMT400073949
Transcript Infomation

pacid=37431377 locus=PGSC0003DMG400028737 ID=PGSC0003DMT400073949.v4.03 annot-version=v4.03
Sequence

ATGGGAGAGATGTGGTTTAGTGTTGTTATTGTCTTGTTATTCAGTATCTTGAATGTTGGG
AAGGCTGAAATCTACATAGTGACAGTTGAAGGAGAGCCTGTCATAAGCTATAAAGGTGGC
ATTGATGGTTTTGAAGCCACTGCTGCAGAGTCTGATGAAAAAATTGATACCACTAGTGAA
TCGGTTACATCCTATGCCCAACATTTGGAAAAGAAGCATGATATGCTTCTAGCTTTGCTA
TTTGACCGTGGGACCTACAAGAAAATCTACAGCTACCGTCATCTAATTAATGGCTTCGCA
GCTCATATTTCACATGAGCAGGCAGAAATCCTCAGACGAGCTCCTGGTGTGAAGTCTGTG
GAGAGAGATTGGAAGGTGAAGAGACTTACAACTCACACGCCACAGTTTTTGGGGCTTCCT
ACAGGAGTTTGGCCGACAGGTGGTGGATTTGACCGGGCAGGCGAGGATATCATAATAGGT
TTCATCGACTCTGGCATCTATCCACACCATCCAAGCTTTGCAAGCCACAACACTGAGCCC
TATGGACCACTTCCAAAATATAGAGGAAAATGTGAAATTGATCCTAACACCAAGAAAGAC
TATTGCAATGGGAAGATTATAGGTGCTCAACATTTTGCGGAAGCTGCAAAAGCAGCTGGT
TCATTTAATCCTGCAATTGATTTTGATTCTCCTCTAGACGGTGACGGACACGGAAGCCAC
ACAGCAGCTATCGCTGCTGGAAACAATGGGATTCCTGTCAGAATGCATGGATTTGAGTTC
GGAAGAGCAAGTGGTATGGCACCTCGTGCGAGAATTGCTGTATACAAGGCACTATATAGG
CTATTTGGAGGGTTTGTTGCAGATGTAGTTGCTGCTATTGAACAGGCTGTTCATGATGGT
GTGGACATTCTTAATCTCTCTGTGGGGCCAAACAGTCCACCGGCAACTACAAAGACAACA
TTTTTGAACCCTTTTGATGCTACACTTCTTTCAGCTGTGAAAGCCGGTGTATTTATTGCA
CAGGCTGCTGGAAACGGAGGTCCTTTCCCCAAAACTTTGTTGTCTTATAGTCCATGGATA
GCAACAGTGGCTGCTGCAGTTGATGATCGTAGATACAAAAATCATTTGACATTAGGAAAT
GGGAAAGTCTTAGCTGGACTCGGTCTATCACCTTCCACACATCCGAACCGGACATTCACT
ATGGTAGCAGCAAATGATGTTCTTTTGGATTCGTCGGTTACTAAGTACAGTCCTGCTGAT
TGTCAAAGGCCAGAAGTTTTAAACAAGAATTTGGTGGAGGGAAACATCCTTCTTTGTGGC
TATTCTTTCAATTTCGTAGTTGGCACAGCATCGATTAAAAAAGCCGCGGAAACAGCAAAA
GCTCTTGGTGCTGCTGGCTTCGTTCTTGCTGTAGAAAATGCTTCACCAGGAACAAAATTT
GACCCGGTTCCTGTTAGAATTCCTGGGATTCTTATAACAGATGTTTCCATGTCAATGGAG
CTTGTAAACTACTACAACATCACCACTTCAAGAGATTGGACTGGACGTGTTAAGAGCTTT
AAATCAACAGGAAGCATTGGGAATGGGTTGAGGCCAATACTCCACAAATCTGCACCTCAA
GTAGCTGTCTTCTCTGCTAGAGGACCTAATATCAAAGATTACAGCTTTCAAGATGCTGAT
CTCCTGAAACCCGATATACTGGCTCCTGGTTCTCTTATTTGGGCTGCCTGGGCTCCCAAT
GGGACAGATGAAGCCAACTATTGTGGTGAAGGATTTGCATTGATCTCTGGAACTAGCATG
GCAGCACCCCATATAGCAGGAATAGCAGCCCTTATCAAGCAGCACCACCCTCATTGGAGC
CCTGCTGCTATTAAATCAGCATTGATGACAACTTCATCAACCATTGATAGGGCGGAGAGA
CCGCTTCAAGCACAACAGTATTCTGGATCTGAGACCTTGATGCTTGTTCCAGCTACTCCA
TTTGACTATGGAAGTGGACATGTTAATCCTAGAGCAGCTCTGGATCCCGGACTCATTTTT
GATGCAGGTTATCAAGATTATTTGGGGTTCTTGTGCACTGTGCCTGGAATTGATGCTCAG
GAAATAAAGAAGTTCACGCATTCCCCATGCAACTACACCCTTGGTCACCCATCAAATTTC
AACTCACCCTCAATTGCAGTTTCACACCTTGTGGGAACACAAATAATCACACGTATAGTG
ACAAATGTTGCTGAGGAAGAAACATATGTTGTAACAGCAAGAATGGCTCCAGAAATTGCC
ATTGAAACTAATCCTCCTGCAATGACTTTAAGGCACGGTGCATCAAGGAAATTCACGGTA
ACTCTCACTGTCCGATCAGTAACAGGAGCCTATAGTTTTGGAGAGGTTTTACTGAAAGGT
AGCAGAGGTCACAAAGTCAGGATCCCTGTTGCAGCTATGGGTTATGATCGATAG