Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400073941
CDS Infomation

pacid=37433262 polypeptide=PGSC0003DMP400050051 locus=PGSC0003DMG400028733 ID=PGSC0003DMT400073941.v4.03 annot-version=v4.03
Sequence

ATGGGTTCCAGTCATGGAAAATCTTCAACTATCAGGGATCAATCAGTTGAAGGCACAGTA
TCCTCAGATGTAGTTGAGACATTTGTGGCAGAAGAGAAGGAAGAAATCCTTCACACCAGG
AGACAAAAACCGAATCCAAGACTCAGCAGAGGAGTACCAAAAGGGATAGAAGGTGAACTA
GTTGTTGCTGGATGGCCTAACTGGCTTGTTTCAGTTGCAGGTGATGCTTTGAATGGATGG
CTTCCAAGAAGAGCTGATACATTTGAGAAAATAGATAAAATTGGTCAGGGAACTTACAGT
AATGTCTACAAGGGTCGCGATCGTTTGCTCAATAAGGTTGTTGCTCTGAAGAAGGTTCGC
TTTGACAATCTTGATCCTGAGAGTGTCAAGTTTATGGCAAGAGAGATCATTCTATTGAGA
AGGCTTGGTGATCACCCGAATGTTATCAAATTGGAAGGTGTAGTCACCTCAAAAATGTCC
TATAGTTTGTACCTTGTTTTTGATTGCATGGAATATGATCTCAAGGGAATTCAAGAACAG
AAAGGTGTCAAGTTATCTGAACCTGAGATCAAATGTTACATGAACCAGCTGCTTAAAGGG
CTTGATCACTGCCATAGCCGTGGTATCTTGCATCGAGATGTAAAGACTTCTAACCTGTTA
GTTAATAAAGATGGTATCTTGAAAATTGCAGATTTTGGGCTGTCAACATTTTTTGATCCA
GAACAAAGCATCCCCTTAACTAGCCGGATTGTAACTCTCTTCTATAGGCCACCGGAACTT
TTGCTTGGATCAAATTATTATGGAGTTGGAGTTGATTTATGGGGTGTTGGTTGTGTACTT
GGTGAACTATTTACTGGCAAGCCAATTATGCCTGGTAGAACTGAAGTAGAGCAACTGCAT
AAAATCTTCAAGCTCTGTGGTTCTCCATCTGATGATTTTTGGAAAAAATCCAAATTGCCC
AATGCAGTAATGTTCCAGCCAATAGAGCCTTATAGACGGATTCTTCACACGACCTTTCAT
GATCTTCCTGCAGCTGCTGTAGGACTAATGGACACCTTACTTTCCATAAAAGCTGAATAT
AGAGGGACTGCAGCTCTTGCTCTTCAGAATGAGTTTTTCACAACAGAACCATTTGCTTGT
GATCCCTCAAGTTTGCCACAATGCCCCCCCAGAAAAGAGATCGATGCAAAAAAGACTGAA
ATCGAGGGGAGTAGGGTCCGGAGTTATGCACGAGATAAAAGTGTAAGGGCAGTTCCAGCA
CCTGAAGCTAATGCAGAATTAAAGAGTAACATAGACAGAAGACAACTCATTGCCCATTCA
GAAACCTGGAATAGGCTTGAAAAAACAAACGAATATGTCTCAGGATGTGTTATAAATGAA
GGAACAAACTCTTCTACATTTTTTCAGGTGTCCAGCAGAAAAGAGGGCTCAGAGAATTAT
ACTCAGAGAGAGATAAGGAAAGAACCAATTCATGATATCAAAGGAAAGAAAAAGTGGTCA
GGTCCATTACCTGTTCCATCAGATAAAATGCATGAATCAGAAGGCCTTGACTTGGTGGAA
GACGATCAATATTTTGGTCCACTTCCATCTGCATCAAAACCAATCGATGTGGATAAAATA
ATTAGAGAGCATGACCGACAGATCCAAGAATCTGTTGAACGTGCCAAGCAACAGAAGAAA
CTAGCTAAAGCTCGGTATTGA

Peptide Sequence

PEP ID

PGSC0003DMP400050051
PEP Infomation

pacid=37433262 transcript=PGSC0003DMT400073941 locus=PGSC0003DMG400028733 ID=PGSC0003DMT400073941.v4.03 annot-version=v4.03
Sequence

MGSSHGKSSTIRDQSVEGTVSSDVVETFVAEEKEEILHTRRQKPNPRLSRGVPKGIEGEL
VVAGWPNWLVSVAGDALNGWLPRRADTFEKIDKIGQGTYSNVYKGRDRLLNKVVALKKVR
FDNLDPESVKFMAREIILLRRLGDHPNVIKLEGVVTSKMSYSLYLVFDCMEYDLKGIQEQ
KGVKLSEPEIKCYMNQLLKGLDHCHSRGILHRDVKTSNLLVNKDGILKIADFGLSTFFDP
EQSIPLTSRIVTLFYRPPELLLGSNYYGVGVDLWGVGCVLGELFTGKPIMPGRTEVEQLH
KIFKLCGSPSDDFWKKSKLPNAVMFQPIEPYRRILHTTFHDLPAAAVGLMDTLLSIKAEY
RGTAALALQNEFFTTEPFACDPSSLPQCPPRKEIDAKKTEIEGSRVRSYARDKSVRAVPA
PEANAELKSNIDRRQLIAHSETWNRLEKTNEYVSGCVINEGTNSSTFFQVSSRKEGSENY
TQREIRKEPIHDIKGKKKWSGPLPVPSDKMHESEGLDLVEDDQYFGPLPSASKPIDVDKI
IREHDRQIQESVERAKQQKKLAKARY*

Transcript Sequence

Transcript ID

PGSC0003DMT400073941
Transcript Infomation

pacid=37433262 locus=PGSC0003DMG400028733 ID=PGSC0003DMT400073941.v4.03 annot-version=v4.03
Sequence

ATGGGTTCCAGTCATGGAAAATCTTCAACTATCAGGGATCAATCAGTTGAAGGCACAGTA
TCCTCAGATGTAGTTGAGACATTTGTGGCAGAAGAGAAGGAAGAAATCCTTCACACCAGG
AGACAAAAACCGAATCCAAGACTCAGCAGAGGAGTACCAAAAGGGATAGAAGGTGAACTA
GTTGTTGCTGGATGGCCTAACTGGCTTGTTTCAGTTGCAGGTGATGCTTTGAATGGATGG
CTTCCAAGAAGAGCTGATACATTTGAGAAAATAGATAAAATTGGTCAGGGAACTTACAGT
AATGTCTACAAGGGTCGCGATCGTTTGCTCAATAAGGTTGTTGCTCTGAAGAAGGTTCGC
TTTGACAATCTTGATCCTGAGAGTGTCAAGTTTATGGCAAGAGAGATCATTCTATTGAGA
AGGCTTGGTGATCACCCGAATGTTATCAAATTGGAAGGTGTAGTCACCTCAAAAATGTCC
TATAGTTTGTACCTTGTTTTTGATTGCATGGAATATGATCTCAAGGGAATTCAAGAACAG
AAAGGTGTCAAGTTATCTGAACCTGAGATCAAATGTTACATGAACCAGCTGCTTAAAGGG
CTTGATCACTGCCATAGCCGTGGTATCTTGCATCGAGATGTAAAGACTTCTAACCTGTTA
GTTAATAAAGATGGTATCTTGAAAATTGCAGATTTTGGGCTGTCAACATTTTTTGATCCA
GAACAAAGCATCCCCTTAACTAGCCGGATTGTAACTCTCTTCTATAGGCCACCGGAACTT
TTGCTTGGATCAAATTATTATGGAGTTGGAGTTGATTTATGGGGTGTTGGTTGTGTACTT
GGTGAACTATTTACTGGCAAGCCAATTATGCCTGGTAGAACTGAAGTAGAGCAACTGCAT
AAAATCTTCAAGCTCTGTGGTTCTCCATCTGATGATTTTTGGAAAAAATCCAAATTGCCC
AATGCAGTAATGTTCCAGCCAATAGAGCCTTATAGACGGATTCTTCACACGACCTTTCAT
GATCTTCCTGCAGCTGCTGTAGGACTAATGGACACCTTACTTTCCATAAAAGCTGAATAT
AGAGGGACTGCAGCTCTTGCTCTTCAGAATGAGTTTTTCACAACAGAACCATTTGCTTGT
GATCCCTCAAGTTTGCCACAATGCCCCCCCAGAAAAGAGATCGATGCAAAAAAGACTGAA
ATCGAGGGGAGTAGGGTCCGGAGTTATGCACGAGATAAAAGTGTAAGGGCAGTTCCAGCA
CCTGAAGCTAATGCAGAATTAAAGAGTAACATAGACAGAAGACAACTCATTGCCCATTCA
GAAACCTGGAATAGGCTTGAAAAAACAAACGAATATGTCTCAGGATGTGTTATAAATGAA
GGAACAAACTCTTCTACATTTTTTCAGGTGTCCAGCAGAAAAGAGGGCTCAGAGAATTAT
ACTCAGAGAGAGATAAGGAAAGAACCAATTCATGATATCAAAGGAAAGAAAAAGTGGTCA
GGTCCATTACCTGTTCCATCAGATAAAATGCATGAATCAGAAGGCCTTGACTTGGTGGAA
GACGATCAATATTTTGGTCCACTTCCATCTGCATCAAAACCAATCGATGTGGATAAAATA
ATTAGAGAGCATGACCGACAGATCCAAGAATCTGTTGAACGTGCCAAGCAACAGAAGAAA
CTAGCTAAAGCTCGGTATTGA