Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400073927
CDS Infomation

pacid=37434121 polypeptide=PGSC0003DMP400050046 locus=PGSC0003DMG400028730 ID=PGSC0003DMT400073927.v4.03 annot-version=v4.03
Sequence

ATGGGTTCCAGTCATGGAAAATCTTCAACTATGAGGGATCGATCAGTTGAAGGAACGGTA
TCCTCAGATGTAGTTGAGACATTTGTGGCAGAAGAAAAGGAAGAAATCCTTCACACCAGG
AGATGGAAACTGAATCCAAGACTCAGCAGAGGAGTAACAAAAGGAATAGAAGGTGAACTA
GTTGTTGCTGGATGGCCTATTTGGCTTGTTGCAGCTGCTGGTAATGCTTTAAATGGATGG
CTTCCAAGAAGTATTGATACTTTAGACAAAATAGATAAAATTGGCCAGGGAACTTACAGT
AATGTCTACATCGCTCGCGATTGTTTGCTCAATAAGCTTGTTGCTCTGAAGAAGGTTCGT
TTTGACACATTTGATCCCGAGAGTGTCAAGTTTATGGCAAGAGAGATCATTATATTAAGA
AGGCTTGGTGATCACCCGAATGTTATCAAATTGGAAGGTTTAGCCATCTCAAAAATGAAG
TACAGTTTGTACCTTGTTTTTGAATGCATGGAATATGATCTCAAGGCAATTCAAGAACAC
AAAGGTGTCAAGTTTTCTGAACCTGAAATCAAATGTTACATGAACCAGCTGCTTAAAGGG
CTTGATCACTGCCATAGCCATGGTATCTTGCATCGAGATGTAAAAACTTCTAACTTATTA
GTTGATAAAGATGGTATCCTAAAACTTGCAGATTTTGGGTTGTCAACATTTTTTGATCCA
GAACAAAGCAAGCCTTTAACTAGCAAAATTGTGACTCTCTGGTATCGGCCACCAGAACTT
TTACTTGGATCAAATAGTTATGGAGTTGGAGTTGATTTATGGGGTGTTGGTTGTGTACTT
GGTGAACTATTTACTGGCAAGCCTATTATGCCTGGTAAAACTGAAGTTGAGCAATTGCAT
AAAATCTTCAAGCTCTGTGGTTCTCCATCTGATGATTTTTGGAACAAATCCAAATTGCCT
AATGCAAAGATATTTAAGCCAAAAGAGCCTTATAGACGGATTCTTTACACGACCTTCCAT
GATCTTCCTGCAGCTGCTGTAGGACTAATGGACACTTTACTTTCCTTAAAAGCTGAATAT
AGAGGGACAGCAGCTCTTGCTCTTCAGAATGAGTTTTTCACAACAGAACCATTTGCTTGT
GATACCTCAAGTTTGCCACAATCCCCCCCCAGAGCAGAGATTTATGCAAAAATGACTGAA
ATCAAGAGGAGGGTCCGGAATTATGCACACGATAGAAGTGTAAGGGCAATTCCAGCAGCT
GAAGCTAATGCGGAATTAAAGAGTAACATAGACCGAAGACAACTCCTTACCCATTCAAAA
GCCCGGAATAGGCTTGAAAAAACAAATGAATATGTCTCAGGAGGTGTTCTAGATGAAGGA
ACAAACTCTTCTGAATGTTTTCAGGTGTCCAGCAGAAAAGAGGGCTCAGTGAATTATACT
CAGAGAGAGATAAGGAAAGAACCAAACCATGATATCAAAGGAAAGAAGAAGTGGTCAGGT
CCATTACTCAGAGAGCACGACAACATGATTCTTGGGAAGGAATCAACAGCTAAAGGGAAT
GACCATGACTCGAAGGGAAAGACAAATCTAGGTCCATCAACATCGACTAATGATCAAATA
TTTACTCTATTACCTGACAAATGGACCAATATGCAGGGCTTACCAAGAGAGCATAAGGCA
CGGATCCTAAAAGATGCTCAATTGGTGATGTCTGACAAGAAAAAAATGTCGGAAGGGGAA
GGTAATAACTCCAACAAACTTATTGAACAATTGTTTCCTCCTGCAGAGTCAGATGGCCTT
GATTTCCTGGAAGACAGCCAATTTTTTTGTCCACTTCCATTTACATCAAAACCAATTGAT
GTGGATCGAATAATTAGAGAGCACGACCGACAGATCCAAGAATCTGTTGAACGCGCCAAG
CAACAGAAGAAACTAGCTAAAGCTCGGTATTGA

Peptide Sequence

PEP ID

PGSC0003DMP400050046
PEP Infomation

pacid=37434121 transcript=PGSC0003DMT400073927 locus=PGSC0003DMG400028730 ID=PGSC0003DMT400073927.v4.03 annot-version=v4.03
Sequence

MGSSHGKSSTMRDRSVEGTVSSDVVETFVAEEKEEILHTRRWKLNPRLSRGVTKGIEGEL
VVAGWPIWLVAAAGNALNGWLPRSIDTLDKIDKIGQGTYSNVYIARDCLLNKLVALKKVR
FDTFDPESVKFMAREIIILRRLGDHPNVIKLEGLAISKMKYSLYLVFECMEYDLKAIQEH
KGVKFSEPEIKCYMNQLLKGLDHCHSHGILHRDVKTSNLLVDKDGILKLADFGLSTFFDP
EQSKPLTSKIVTLWYRPPELLLGSNSYGVGVDLWGVGCVLGELFTGKPIMPGKTEVEQLH
KIFKLCGSPSDDFWNKSKLPNAKIFKPKEPYRRILYTTFHDLPAAAVGLMDTLLSLKAEY
RGTAALALQNEFFTTEPFACDTSSLPQSPPRAEIYAKMTEIKRRVRNYAHDRSVRAIPAA
EANAELKSNIDRRQLLTHSKARNRLEKTNEYVSGGVLDEGTNSSECFQVSSRKEGSVNYT
QREIRKEPNHDIKGKKKWSGPLLREHDNMILGKESTAKGNDHDSKGKTNLGPSTSTNDQI
FTLLPDKWTNMQGLPREHKARILKDAQLVMSDKKKMSEGEGNNSNKLIEQLFPPAESDGL
DFLEDSQFFCPLPFTSKPIDVDRIIREHDRQIQESVERAKQQKKLAKARY*

Transcript Sequence

Transcript ID

PGSC0003DMT400073927
Transcript Infomation

pacid=37434121 locus=PGSC0003DMG400028730 ID=PGSC0003DMT400073927.v4.03 annot-version=v4.03
Sequence

ATGGGTTCCAGTCATGGAAAATCTTCAACTATGAGGGATCGATCAGTTGAAGGAACGGTA
TCCTCAGATGTAGTTGAGACATTTGTGGCAGAAGAAAAGGAAGAAATCCTTCACACCAGG
AGATGGAAACTGAATCCAAGACTCAGCAGAGGAGTAACAAAAGGAATAGAAGGTGAACTA
GTTGTTGCTGGATGGCCTATTTGGCTTGTTGCAGCTGCTGGTAATGCTTTAAATGGATGG
CTTCCAAGAAGTATTGATACTTTAGACAAAATAGATAAAATTGGCCAGGGAACTTACAGT
AATGTCTACATCGCTCGCGATTGTTTGCTCAATAAGCTTGTTGCTCTGAAGAAGGTTCGT
TTTGACACATTTGATCCCGAGAGTGTCAAGTTTATGGCAAGAGAGATCATTATATTAAGA
AGGCTTGGTGATCACCCGAATGTTATCAAATTGGAAGGTTTAGCCATCTCAAAAATGAAG
TACAGTTTGTACCTTGTTTTTGAATGCATGGAATATGATCTCAAGGCAATTCAAGAACAC
AAAGGTGTCAAGTTTTCTGAACCTGAAATCAAATGTTACATGAACCAGCTGCTTAAAGGG
CTTGATCACTGCCATAGCCATGGTATCTTGCATCGAGATGTAAAAACTTCTAACTTATTA
GTTGATAAAGATGGTATCCTAAAACTTGCAGATTTTGGGTTGTCAACATTTTTTGATCCA
GAACAAAGCAAGCCTTTAACTAGCAAAATTGTGACTCTCTGGTATCGGCCACCAGAACTT
TTACTTGGATCAAATAGTTATGGAGTTGGAGTTGATTTATGGGGTGTTGGTTGTGTACTT
GGTGAACTATTTACTGGCAAGCCTATTATGCCTGGTAAAACTGAAGTTGAGCAATTGCAT
AAAATCTTCAAGCTCTGTGGTTCTCCATCTGATGATTTTTGGAACAAATCCAAATTGCCT
AATGCAAAGATATTTAAGCCAAAAGAGCCTTATAGACGGATTCTTTACACGACCTTCCAT
GATCTTCCTGCAGCTGCTGTAGGACTAATGGACACTTTACTTTCCTTAAAAGCTGAATAT
AGAGGGACAGCAGCTCTTGCTCTTCAGAATGAGTTTTTCACAACAGAACCATTTGCTTGT
GATACCTCAAGTTTGCCACAATCCCCCCCCAGAGCAGAGATTTATGCAAAAATGACTGAA
ATCAAGAGGAGGGTCCGGAATTATGCACACGATAGAAGTGTAAGGGCAATTCCAGCAGCT
GAAGCTAATGCGGAATTAAAGAGTAACATAGACCGAAGACAACTCCTTACCCATTCAAAA
GCCCGGAATAGGCTTGAAAAAACAAATGAATATGTCTCAGGAGGTGTTCTAGATGAAGGA
ACAAACTCTTCTGAATGTTTTCAGGTGTCCAGCAGAAAAGAGGGCTCAGTGAATTATACT
CAGAGAGAGATAAGGAAAGAACCAAACCATGATATCAAAGGAAAGAAGAAGTGGTCAGGT
CCATTACTCAGAGAGCACGACAACATGATTCTTGGGAAGGAATCAACAGCTAAAGGGAAT
GACCATGACTCGAAGGGAAAGACAAATCTAGGTCCATCAACATCGACTAATGATCAAATA
TTTACTCTATTACCTGACAAATGGACCAATATGCAGGGCTTACCAAGAGAGCATAAGGCA
CGGATCCTAAAAGATGCTCAATTGGTGATGTCTGACAAGAAAAAAATGTCGGAAGGGGAA
GGTAATAACTCCAACAAACTTATTGAACAATTGTTTCCTCCTGCAGAGTCAGATGGCCTT
GATTTCCTGGAAGACAGCCAATTTTTTTGTCCACTTCCATTTACATCAAAACCAATTGAT
GTGGATCGAATAATTAGAGAGCACGACCGACAGATCCAAGAATCTGTTGAACGCGCCAAG
CAACAGAAGAAACTAGCTAAAGCTCGGTATTGA