Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400073880
CDS Infomation

pacid=37475495 polypeptide=PGSC0003DMP400050005 locus=PGSC0003DMG400028707 ID=PGSC0003DMT400073880.v4.03 annot-version=v4.03
Sequence

ATGGTTAGAATTAAGAAGAAAGATCAAAGTTTTCTACTACTCTTGGTTTTGTGTTTGTTC
TTTGTTATGTGTGAATCACATAATTTGAACTACACAAAGTATAAACAAGTTAGCAATATG
AGACTTGAAAGGATTCAAAGGCATTTGGATAGAATCAACAAGCCTCCTCTCTTCACTATT
CAGAGCCCGGATGGAGATATCATAGATTGTGTTCATAAAAGAAAACAACCAGCTTTCGAT
CATCCTTTGCTCAAGAATCACAAGATTCAGAAGGAACCACCAGAGATTCCAAAACTGAAA
ACGTCAGTGAAAACAGACGCGATGATGAGTAGAGACGTTGTAAGTAACAATAGCAACAGA
GCAGTGGTAGATTGGCAATTATGGCACCAGAACGGAACGCGGTGTCCTGCAGGCACTGTT
CCGATAAGGCGGAGTGAGGTTCATGATGTGCTTAGAGCAAAGTCATTGTATGATTTTGGT
AAGAAAAAACGACATGGATTGCCTATTGCTCGTCGTGTTGATGCTCCTGATGTTGTTAGT
GGCAATGGACATGAGCACGCAATAGCATACACAGGAGGGTCTGAAGAGATATATGGTGCA
AAAGCAACAATAAACGTGTGGGAACCATCAATCGAAGTGGTGAACGAGTTTAGTCTATCT
CAGATTTGGGTTCTATCTGGATCTTTTGACGGGTCGGATCTTAACAGTATTGAAGCTGGT
TGGCAGGTTAGTCCGGAGCTGTATGGTGACAGCAGACCTAGATTATTTACATACTGGACG
AGTGATTCCTATCAAGCAACAGGATGTTACAACCTATTATGTTCAGGATTTGTCCAAACA
AATAGCAGAATAGCCATTGGTGCTGCCATTTCTCCTGTTTCATCCGTTGAGGGAAGTCAA
TATGATGTTACTATACTCATTTGGAAGGATCCAAAGGTAGGGAATTGGTGGATGGTGTTT
GGTGACAACACACTAGTAGGTTATTGGCCGGCTGAGTTATTTACACACTTGGCGGAGCGT
GCTACAATGGTGGAGTGGGGCGGAGAGATAGTAAATTCACGGGCCAACGGAGAACATACG
TCTACACAAATGGGCTCGGGCCATTTTGGTGATGATGGATTTAGAAAAGCAAGTTATTTC
AGAAATCTTGAAATTGTGGACTCTGATAACAGCCTAAGTTCAGCCCAAGATATATCAATC
TTGGCTGAGAACACAAATTGCTATAACATAAAAAATGCTTATAGCAGTGAATGGGGTACA
CATTTCTATTATGGTGGACCTGGTAGAAATCCACAATGCAACTAA

Peptide Sequence

PEP ID

PGSC0003DMP400050005
PEP Infomation

pacid=37475495 transcript=PGSC0003DMT400073880 locus=PGSC0003DMG400028707 ID=PGSC0003DMT400073880.v4.03 annot-version=v4.03
Sequence

MVRIKKKDQSFLLLLVLCLFFVMCESHNLNYTKYKQVSNMRLERIQRHLDRINKPPLFTI
QSPDGDIIDCVHKRKQPAFDHPLLKNHKIQKEPPEIPKLKTSVKTDAMMSRDVVSNNSNR
AVVDWQLWHQNGTRCPAGTVPIRRSEVHDVLRAKSLYDFGKKKRHGLPIARRVDAPDVVS
GNGHEHAIAYTGGSEEIYGAKATINVWEPSIEVVNEFSLSQIWVLSGSFDGSDLNSIEAG
WQVSPELYGDSRPRLFTYWTSDSYQATGCYNLLCSGFVQTNSRIAIGAAISPVSSVEGSQ
YDVTILIWKDPKVGNWWMVFGDNTLVGYWPAELFTHLAERATMVEWGGEIVNSRANGEHT
STQMGSGHFGDDGFRKASYFRNLEIVDSDNSLSSAQDISILAENTNCYNIKNAYSSEWGT
HFYYGGPGRNPQCN*

Transcript Sequence

Transcript ID

PGSC0003DMT400073880
Transcript Infomation

pacid=37475495 locus=PGSC0003DMG400028707 ID=PGSC0003DMT400073880.v4.03 annot-version=v4.03
Sequence

ATGGTTAGAATTAAGAAGAAAGATCAAAGTTTTCTACTACTCTTGGTTTTGTGTTTGTTC
TTTGTTATGTGTGAATCACATAATTTGAACTACACAAAGTATAAACAAGTTAGCAATATG
AGACTTGAAAGGATTCAAAGGCATTTGGATAGAATCAACAAGCCTCCTCTCTTCACTATT
CAGAGCCCGGATGGAGATATCATAGATTGTGTTCATAAAAGAAAACAACCAGCTTTCGAT
CATCCTTTGCTCAAGAATCACAAGATTCAGAAGGAACCACCAGAGATTCCAAAACTGAAA
ACGTCAGTGAAAACAGACGCGATGATGAGTAGAGACGTTGTAAGTAACAATAGCAACAGA
GCAGTGGTAGATTGGCAATTATGGCACCAGAACGGAACGCGGTGTCCTGCAGGCACTGTT
CCGATAAGGCGGAGTGAGGTTCATGATGTGCTTAGAGCAAAGTCATTGTATGATTTTGGT
AAGAAAAAACGACATGGATTGCCTATTGCTCGTCGTGTTGATGCTCCTGATGTTGTTAGT
GGCAATGGACATGAGCACGCAATAGCATACACAGGAGGGTCTGAAGAGATATATGGTGCA
AAAGCAACAATAAACGTGTGGGAACCATCAATCGAAGTGGTGAACGAGTTTAGTCTATCT
CAGATTTGGGTTCTATCTGGATCTTTTGACGGGTCGGATCTTAACAGTATTGAAGCTGGT
TGGCAGGTTAGTCCGGAGCTGTATGGTGACAGCAGACCTAGATTATTTACATACTGGACG
AGTGATTCCTATCAAGCAACAGGATGTTACAACCTATTATGTTCAGGATTTGTCCAAACA
AATAGCAGAATAGCCATTGGTGCTGCCATTTCTCCTGTTTCATCCGTTGAGGGAAGTCAA
TATGATGTTACTATACTCATTTGGAAGGATCCAAAGGTAGGGAATTGGTGGATGGTGTTT
GGTGACAACACACTAGTAGGTTATTGGCCGGCTGAGTTATTTACACACTTGGCGGAGCGT
GCTACAATGGTGGAGTGGGGCGGAGAGATAGTAAATTCACGGGCCAACGGAGAACATACG
TCTACACAAATGGGCTCGGGCCATTTTGGTGATGATGGATTTAGAAAAGCAAGTTATTTC
AGAAATCTTGAAATTGTGGACTCTGATAACAGCCTAAGTTCAGCCCAAGATATATCAATC
TTGGCTGAGAACACAAATTGCTATAACATAAAAAATGCTTATAGCAGTGAATGGGGTACA
CATTTCTATTATGGTGGACCTGGTAGAAATCCACAATGCAACTAA