Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400073810
CDS Infomation

pacid=37467354 polypeptide=PGSC0003DMP400049958 locus=PGSC0003DMG400028677 ID=PGSC0003DMT400073810.v4.03 annot-version=v4.03
Sequence

ATGAAGCCAAGAACCAACGGGGGGTCAAGGTCCCAGAAGTCCAATGGTGTTCAGAGTGAG
GGTCCTAACTGGGTCATAATTGCAGGTAGTGCGTTATTAAGTACATTATCTGTACGCTTA
GGCTACAAGCTGAAGCAGGTGCTTGATTCAAGACAGCCGAACAAGACGACCAGCAGTTTG
AAAGGAAATGAAAAGTCTTCTGATGGAAGTAAGTTAGGGAATGGTCATATGCAGTCAAGC
ACTTACTATTTTTCCCAAGATGATGATGGCTGCTACAATTGCAACACGGAAGCTGGAGGA
TTGGGAATTACAAAGCAGCAGTATAATGGGTCTGAGCCTGAAATGGCGCTCCCTCTCGTG
GCAGTTCCTGCCATTGGATTCAATAAAGAGAATGGTGGGATTTGGTCAACCTCTCCTGAC
CGTCTTGAACTGCCACAGAAACCATTTCATCGCTCTAACAGCTCTGAGTCGCCATGTGTC
TCCGAATCTGGTTCCGACATATACAGCAAGCGAGAAGTGATACAAAAGCTGAGGCTACAG
ATAAAGAGAAGGGACGAAACGATATTAGAGATGCAAGAACAGATTGTAGAGTTGCAAGCT
TCTCTCAATTCTCAGATGTCGCATTCCACCCATCAGCAGTCAGTGCTGGATGCTGCAAAC
AGGGATCTGTTTGATTCAGAGAGAGAGATACAGAGGCTGAGGAAGGCAATTGCAGACCAT
TGCGTTGGACAAGTGGGTTCTTACGATAAGCCTCCAACAGTACCTGTATGGCCAGCTGAA
GTCCGATATGGTCATACTAATGGTCACCTGGATGTTGACAGAAACTCAGATACTTCAGAG
AAGGGAAGAGGAGATGGAGAAAGGTTTGAAATGCTGAAGCGCGAAAAAGATGAGCTGAAA
GAAGTGATTGATGGGAAGGATTATCTGATCAAGAGCTACAAGGAGCAAACCATCGAGCTT
TCAATCAAGGTCAAGGAACTGCAACAGAGATTGGATGCTCAGCTCCCAAACATTTTGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400049958
PEP Infomation

pacid=37467354 transcript=PGSC0003DMT400073810 locus=PGSC0003DMG400028677 ID=PGSC0003DMT400073810.v4.03 annot-version=v4.03
Sequence

MKPRTNGGSRSQKSNGVQSEGPNWVIIAGSALLSTLSVRLGYKLKQVLDSRQPNKTTSSL
KGNEKSSDGSKLGNGHMQSSTYYFSQDDDGCYNCNTEAGGLGITKQQYNGSEPEMALPLV
AVPAIGFNKENGGIWSTSPDRLELPQKPFHRSNSSESPCVSESGSDIYSKREVIQKLRLQ
IKRRDETILEMQEQIVELQASLNSQMSHSTHQQSVLDAANRDLFDSEREIQRLRKAIADH
CVGQVGSYDKPPTVPVWPAEVRYGHTNGHLDVDRNSDTSEKGRGDGERFEMLKREKDELK
EVIDGKDYLIKSYKEQTIELSIKVKELQQRLDAQLPNIL*

Transcript Sequence

Transcript ID

PGSC0003DMT400073810
Transcript Infomation

pacid=37467354 locus=PGSC0003DMG400028677 ID=PGSC0003DMT400073810.v4.03 annot-version=v4.03
Sequence

ATGAAGCCAAGAACCAACGGGGGGTCAAGGTCCCAGAAGTCCAATGGTGTTCAGAGTGAG
GGTCCTAACTGGGTCATAATTGCAGGTAGTGCGTTATTAAGTACATTATCTGTACGCTTA
GGCTACAAGCTGAAGCAGGTGCTTGATTCAAGACAGCCGAACAAGACGACCAGCAGTTTG
AAAGGAAATGAAAAGTCTTCTGATGGAAGTAAGTTAGGGAATGGTCATATGCAGTCAAGC
ACTTACTATTTTTCCCAAGATGATGATGGCTGCTACAATTGCAACACGGAAGCTGGAGGA
TTGGGAATTACAAAGCAGCAGTATAATGGGTCTGAGCCTGAAATGGCGCTCCCTCTCGTG
GCAGTTCCTGCCATTGGATTCAATAAAGAGAATGGTGGGATTTGGTCAACCTCTCCTGAC
CGTCTTGAACTGCCACAGAAACCATTTCATCGCTCTAACAGCTCTGAGTCGCCATGTGTC
TCCGAATCTGGTTCCGACATATACAGCAAGCGAGAAGTGATACAAAAGCTGAGGCTACAG
ATAAAGAGAAGGGACGAAACGATATTAGAGATGCAAGAACAGATTGTAGAGTTGCAAGCT
TCTCTCAATTCTCAGATGTCGCATTCCACCCATCAGCAGTCAGTGCTGGATGCTGCAAAC
AGGGATCTGTTTGATTCAGAGAGAGAGATACAGAGGCTGAGGAAGGCAATTGCAGACCAT
TGCGTTGGACAAGTGGGTTCTTACGATAAGCCTCCAACAGTACCTGTATGGCCAGCTGAA
GTCCGATATGGTCATACTAATGGTCACCTGGATGTTGACAGAAACTCAGATACTTCAGAG
AAGGGAAGAGGAGATGGAGAAAGGTTTGAAATGCTGAAGCGCGAAAAAGATGAGCTGAAA
GAAGTGATTGATGGGAAGGATTATCTGATCAAGAGCTACAAGGAGCAAACCATCGAGCTT
TCAATCAAGGTCAAGGAACTGCAACAGAGATTGGATGCTCAGCTCCCAAACATTTTGTAG