Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400073788
CDS Infomation

pacid=37465770 polypeptide=PGSC0003DMP400049944 locus=PGSC0003DMG400028666 ID=PGSC0003DMT400073788.v4.03 annot-version=v4.03
Sequence

ATGCCTGCTTGGTGGGGGAAAAAATCCACCAAGAACAAAGACCCACAAGTTAAAGAGAAA
GAAAGGGAAAAGTATGTGAAACCCAGAAGTTTTGATGAGTTACTTAGTAGAAATTCACCA
AGAACCAGTAAAGATTTTAGTGGTTCTGGTTCTGGGTTTTCTGGGTTTGATTCAGGTTCT
TCTTTGGAGAAAGCTCATCCTTTACCTATGCCTTCTGTTTCTTCACTGGGAAATGATCAT
GGGGTTGTTTTGGGATGTGGGTCGGTTTCAGTTTCGAGTACTAGCTCATCTGGGTCATCT
GATGGTGGTGGTGCTGTGAATACTGATCAAGCTCAGTTGGATACTTTCAGAGGACTTGGA
GATAATAGGTTGAGCCCACTGTCACGAAGCCCAGTTCGTTCCAGAGGGACAACTACCACG
TCATCACCTTTACATCCTCGGTTTTCGAGTTTAAATCTGGACTCTCCAACGGGCAAGTTG
GATGATGTAAGGAGTGAATGTCATCAGCTGCCCCTTCCACCCGGTTCTCCACCCAGTCCT
TCTACTTTGCCAAACCCAAGACCTTGTGTTGTGGCTGAAGGCGCAACCATTAATATTTCA
AAATGGAAAAAAGGCAAGCTCCTAGGAAGAGGCACATTTGGTCATGTGTATCTTGGATTC
AACAGGGAGAATGGACAAATGTGTGCGATAAAAGAAGTCAAGGTGGTTTCAGATGATCAA
ACATCCAAAGAGTGTCTTAAGCAACTGAATCAGGAAATCATTTTACTCAGTAACTTGACA
CATCCAAATATTGTTCGATATCATGGAAGTGAACTGGATGAAGAAACTCTATCAGTTTAC
TTGGAGTACGTTTCTGGGGGTTCTATACATAAACTGTTGCAGGAATATGGACCTTTTAGG
GAGCCAGTTATACAAAACTACACAAGACAGATCCTTTCTGGCCTTTCCTTTTTACATGCT
AGGAATACAGTTCACAGGGATATAAAAGGAGCCAATATACTAGTAGATCCTAATGGTGAA
ATCAAGCTAGCTGATTTTGGCATGGCAAAGCATATAACTTCGTGCGCGTCAGTGCTCTCT
TTCAAAGGAAGTCCTTATTGGATGGCTCCTGAGGTGGTGATGAATACAAGCGGCTACGGC
CTTGCAGTGGATATTTGGAGTTTGGGATGTACAATTCTTGAAATGGCAACTTCAAAGCCA
CCTTGGAGCCAGTATGAAGGGGTTGCCGCCATATTTAAAATTGGAAACAGCAAAGACTTT
CCTGAAATTCCAGAACACCTTTCTAATGATGCAAAAAGCTTTATAAGGTCATGCTTGCAG
CGGGAGCCGTCCACACGACCTACAGCTTCTAAACTACTAGAGCACCCTTTTGTTAAAAAC
CAAAGTACAGCAAAAGTTGCTCATGTCGGTGTAACCAAAGAATCATATCCTCGTTCCTTT
GATGGAAGCCGGACACCGCCAGTGTTGGAGCTGCATCCCGGTGGAAGAAATATTTCTCCT
GGAAGGAATATTTCCCCCGCTGAAGGAAACTATGCATCCCATCCGGTGATCACAGTCTCT
AGACCATTGATCTGCACAAGGGAAAGTGTAAAAGCCATAGCATCTTTACCAGTATCCCCC
ACGTCTAGCCCATTAAGACAGTATGAACCTGCCCGTAAAAGCTGTTATCTTTCTCCTCCT
CACCCATCTTATGGCATCGGGGGCCAGAGTGGATACGAGGCAAATGATTACTCTATGTTT
CAAGCAAGGCCCAGCACAAGAACCACACTTGAGCCATGGCTTGAAATCCCTCAATTTAGA
GCTCAGACACCATCTAGATCCCCCAGAACAAGACCCATTCTTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400049944
PEP Infomation

pacid=37465770 transcript=PGSC0003DMT400073788 locus=PGSC0003DMG400028666 ID=PGSC0003DMT400073788.v4.03 annot-version=v4.03
Sequence

MPAWWGKKSTKNKDPQVKEKEREKYVKPRSFDELLSRNSPRTSKDFSGSGSGFSGFDSGS
SLEKAHPLPMPSVSSLGNDHGVVLGCGSVSVSSTSSSGSSDGGGAVNTDQAQLDTFRGLG
DNRLSPLSRSPVRSRGTTTTSSPLHPRFSSLNLDSPTGKLDDVRSECHQLPLPPGSPPSP
STLPNPRPCVVAEGATINISKWKKGKLLGRGTFGHVYLGFNRENGQMCAIKEVKVVSDDQ
TSKECLKQLNQEIILLSNLTHPNIVRYHGSELDEETLSVYLEYVSGGSIHKLLQEYGPFR
EPVIQNYTRQILSGLSFLHARNTVHRDIKGANILVDPNGEIKLADFGMAKHITSCASVLS
FKGSPYWMAPEVVMNTSGYGLAVDIWSLGCTILEMATSKPPWSQYEGVAAIFKIGNSKDF
PEIPEHLSNDAKSFIRSCLQREPSTRPTASKLLEHPFVKNQSTAKVAHVGVTKESYPRSF
DGSRTPPVLELHPGGRNISPGRNISPAEGNYASHPVITVSRPLICTRESVKAIASLPVSP
TSSPLRQYEPARKSCYLSPPHPSYGIGGQSGYEANDYSMFQARPSTRTTLEPWLEIPQFR
AQTPSRSPRTRPIL*

Transcript Sequence

Transcript ID

PGSC0003DMT400073788
Transcript Infomation

pacid=37465770 locus=PGSC0003DMG400028666 ID=PGSC0003DMT400073788.v4.03 annot-version=v4.03
Sequence

ATGCCTGCTTGGTGGGGGAAAAAATCCACCAAGAACAAAGACCCACAAGTTAAAGAGAAA
GAAAGGGAAAAGTATGTGAAACCCAGAAGTTTTGATGAGTTACTTAGTAGAAATTCACCA
AGAACCAGTAAAGATTTTAGTGGTTCTGGTTCTGGGTTTTCTGGGTTTGATTCAGGTTCT
TCTTTGGAGAAAGCTCATCCTTTACCTATGCCTTCTGTTTCTTCACTGGGAAATGATCAT
GGGGTTGTTTTGGGATGTGGGTCGGTTTCAGTTTCGAGTACTAGCTCATCTGGGTCATCT
GATGGTGGTGGTGCTGTGAATACTGATCAAGCTCAGTTGGATACTTTCAGAGGACTTGGA
GATAATAGGTTGAGCCCACTGTCACGAAGCCCAGTTCGTTCCAGAGGGACAACTACCACG
TCATCACCTTTACATCCTCGGTTTTCGAGTTTAAATCTGGACTCTCCAACGGGCAAGTTG
GATGATGTAAGGAGTGAATGTCATCAGCTGCCCCTTCCACCCGGTTCTCCACCCAGTCCT
TCTACTTTGCCAAACCCAAGACCTTGTGTTGTGGCTGAAGGCGCAACCATTAATATTTCA
AAATGGAAAAAAGGCAAGCTCCTAGGAAGAGGCACATTTGGTCATGTGTATCTTGGATTC
AACAGGGAGAATGGACAAATGTGTGCGATAAAAGAAGTCAAGGTGGTTTCAGATGATCAA
ACATCCAAAGAGTGTCTTAAGCAACTGAATCAGGAAATCATTTTACTCAGTAACTTGACA
CATCCAAATATTGTTCGATATCATGGAAGTGAACTGGATGAAGAAACTCTATCAGTTTAC
TTGGAGTACGTTTCTGGGGGTTCTATACATAAACTGTTGCAGGAATATGGACCTTTTAGG
GAGCCAGTTATACAAAACTACACAAGACAGATCCTTTCTGGCCTTTCCTTTTTACATGCT
AGGAATACAGTTCACAGGGATATAAAAGGAGCCAATATACTAGTAGATCCTAATGGTGAA
ATCAAGCTAGCTGATTTTGGCATGGCAAAGCATATAACTTCGTGCGCGTCAGTGCTCTCT
TTCAAAGGAAGTCCTTATTGGATGGCTCCTGAGGTGGTGATGAATACAAGCGGCTACGGC
CTTGCAGTGGATATTTGGAGTTTGGGATGTACAATTCTTGAAATGGCAACTTCAAAGCCA
CCTTGGAGCCAGTATGAAGGGGTTGCCGCCATATTTAAAATTGGAAACAGCAAAGACTTT
CCTGAAATTCCAGAACACCTTTCTAATGATGCAAAAAGCTTTATAAGGTCATGCTTGCAG
CGGGAGCCGTCCACACGACCTACAGCTTCTAAACTACTAGAGCACCCTTTTGTTAAAAAC
CAAAGTACAGCAAAAGTTGCTCATGTCGGTGTAACCAAAGAATCATATCCTCGTTCCTTT
GATGGAAGCCGGACACCGCCAGTGTTGGAGCTGCATCCCGGTGGAAGAAATATTTCTCCT
GGAAGGAATATTTCCCCCGCTGAAGGAAACTATGCATCCCATCCGGTGATCACAGTCTCT
AGACCATTGATCTGCACAAGGGAAAGTGTAAAAGCCATAGCATCTTTACCAGTATCCCCC
ACGTCTAGCCCATTAAGACAGTATGAACCTGCCCGTAAAAGCTGTTATCTTTCTCCTCCT
CACCCATCTTATGGCATCGGGGGCCAGAGTGGATACGAGGCAAATGATTACTCTATGTTT
CAAGCAAGGCCCAGCACAAGAACCACACTTGAGCCATGGCTTGAAATCCCTCAATTTAGA
GCTCAGACACCATCTAGATCCCCCAGAACAAGACCCATTCTTTAG