Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400073782
CDS Infomation

pacid=37465501 polypeptide=PGSC0003DMP400049942 locus=PGSC0003DMG400028664 ID=PGSC0003DMT400073782.v4.03 annot-version=v4.03
Sequence

ATGCACGACCCAACGCGCCTGAAATCTCAACCCCACCACCACAATCGCCGCCGTGAACCG
CCGTCACATCATCGCCGGGCTTGGTGTTGCTCATTTACTGTACCACCACATAGTCCGGAG
AACCCAGCTGTAGTTCCGGCTCAAAATCCCAAGAAGACCCAATCTTTTCTAAAACCGGAA
GTACCCACGAAGTCTTCTTCCAATTCCTTATCTTCTTTCCCTAATTCTCCTCAAAACCCC
TCCAAACTGACCCGAATCGACCCACGTCGGATCCTCTCACCGGGTCGGGTCTCTCCGATT
GATTCTATCGACGAAACCCTAAACCCAACCGGCCCGGTTAGTTTCCCTGAGATACCCAAG
TCGCCGACTCCGGTTGATTGTGAGCAGCAAGCTAGTGGTGGAGTTGGAGTTAGGGATGAT
TGTAGTTTGGGGATCTTTGATGTGAGGTTGAATCTGAAGGGAAAGAATGGTGGTGGTTTA
GTGTTGGAGCTTAGCTCTGAGGTTCTTAGTACCAATAGTTCTGTTTTTGCTGATTTGATT
GCTGACTATCGGAAAAATTCGAGGGGTTTGTGTAGGATAGAGGTGCCTGATGTGGAGAAT
TTAGGTGTTTTTCGCGATACAATTGAGCTTATGTTTGAGGATGATATTCCTCGGAAACTT
CTCAGGGTCGGTGCTTATCGCGCCATTGATGTTCTCGAGGTATCAGCTGGAATCAAATTC
AACCGGAGTGTTTTATCGTGTTTGAAGTACCTTGAAGCTGTTCCTTGGACTGAGGAAGAG
GAAGAGAAATTGAGAAGATTGTTTAATAAAATGAAGTTTGATCATGAAACAGCTAGAGAC
ATTTCGGCCAGACTCTATGCTCTAGATATGACAGATTCCCAACAGACTTTGTCTAAGCAG
CTTGTTTGGTCTGTGACCACCTGCATTGATGCCAATTCAAGAAACGAGCTAAAATCCTTA
GTCAAGGGTCTCCTGTGCAAAAGCTCAGTCTATGAAAAGGACTGCTCTGATCTGAACAAG
GTGGATATATTTGCAATATGCCTGTCTTGTATAAGTTCACTTGTTAGTTTGCTTGAGGAG
GCAACTGCTACGAGTCCATCTGTAAAATTGACTAAGAAAGAAGACCGGACCCTGATTGAC
CGCATATCTAAGCAGGTTGACAACATCATATGGCTGCTTGAAATTTTGCTCGATCACCAG
ATGGCAGAGGACTTGGTGGATATATGGACCAAACAAAGTCAGTTGCTTGCAATGCATAAA
TGTGCATCTCCATTGGTCAGATACGAGCTTAGCCGGGTGACAGCTATGTTATTCATAGCA
ATGGGCACTGGGAAAATGCATTGCCGCTCTGAAGCAAGGTCGGGGCTTCTTCAGACATGG
TTTAGACCGATGCTATTGGACTTCGGATGGTTACAGAGATGCAAAAAAGGCCTAGACATG
AAGGCATTGGAGGAAGCGATGGGTCAAGCACTCCTTACTCTTCCTTTGAAGGAACAATAT
GTTCTGTTTATGGATTGGTTCAAGTGTTTCTCAAAGCATGGTACTGAATGCCCTAACCTT
AGCAAATCATTCCAGATATGGTGGCGACGATCATTCTTGAGAGGCTCTGAAACTCATGCT
AGTGAATCTAGGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400049942
PEP Infomation

pacid=37465501 transcript=PGSC0003DMT400073782 locus=PGSC0003DMG400028664 ID=PGSC0003DMT400073782.v4.03 annot-version=v4.03
Sequence

MHDPTRLKSQPHHHNRRREPPSHHRRAWCCSFTVPPHSPENPAVVPAQNPKKTQSFLKPE
VPTKSSSNSLSSFPNSPQNPSKLTRIDPRRILSPGRVSPIDSIDETLNPTGPVSFPEIPK
SPTPVDCEQQASGGVGVRDDCSLGIFDVRLNLKGKNGGGLVLELSSEVLSTNSSVFADLI
ADYRKNSRGLCRIEVPDVENLGVFRDTIELMFEDDIPRKLLRVGAYRAIDVLEVSAGIKF
NRSVLSCLKYLEAVPWTEEEEEKLRRLFNKMKFDHETARDISARLYALDMTDSQQTLSKQ
LVWSVTTCIDANSRNELKSLVKGLLCKSSVYEKDCSDLNKVDIFAICLSCISSLVSLLEE
ATATSPSVKLTKKEDRTLIDRISKQVDNIIWLLEILLDHQMAEDLVDIWTKQSQLLAMHK
CASPLVRYELSRVTAMLFIAMGTGKMHCRSEARSGLLQTWFRPMLLDFGWLQRCKKGLDM
KALEEAMGQALLTLPLKEQYVLFMDWFKCFSKHGTECPNLSKSFQIWWRRSFLRGSETHA
SESR*

Transcript Sequence

Transcript ID

PGSC0003DMT400073782
Transcript Infomation

pacid=37465501 locus=PGSC0003DMG400028664 ID=PGSC0003DMT400073782.v4.03 annot-version=v4.03
Sequence

ATGCACGACCCAACGCGCCTGAAATCTCAACCCCACCACCACAATCGCCGCCGTGAACCG
CCGTCACATCATCGCCGGGCTTGGTGTTGCTCATTTACTGTACCACCACATAGTCCGGAG
AACCCAGCTGTAGTTCCGGCTCAAAATCCCAAGAAGACCCAATCTTTTCTAAAACCGGAA
GTACCCACGAAGTCTTCTTCCAATTCCTTATCTTCTTTCCCTAATTCTCCTCAAAACCCC
TCCAAACTGACCCGAATCGACCCACGTCGGATCCTCTCACCGGGTCGGGTCTCTCCGATT
GATTCTATCGACGAAACCCTAAACCCAACCGGCCCGGTTAGTTTCCCTGAGATACCCAAG
TCGCCGACTCCGGTTGATTGTGAGCAGCAAGCTAGTGGTGGAGTTGGAGTTAGGGATGAT
TGTAGTTTGGGGATCTTTGATGTGAGGTTGAATCTGAAGGGAAAGAATGGTGGTGGTTTA
GTGTTGGAGCTTAGCTCTGAGGTTCTTAGTACCAATAGTTCTGTTTTTGCTGATTTGATT
GCTGACTATCGGAAAAATTCGAGGGGTTTGTGTAGGATAGAGGTGCCTGATGTGGAGAAT
TTAGGTGTTTTTCGCGATACAATTGAGCTTATGTTTGAGGATGATATTCCTCGGAAACTT
CTCAGGGTCGGTGCTTATCGCGCCATTGATGTTCTCGAGGTATCAGCTGGAATCAAATTC
AACCGGAGTGTTTTATCGTGTTTGAAGTACCTTGAAGCTGTTCCTTGGACTGAGGAAGAG
GAAGAGAAATTGAGAAGATTGTTTAATAAAATGAAGTTTGATCATGAAACAGCTAGAGAC
ATTTCGGCCAGACTCTATGCTCTAGATATGACAGATTCCCAACAGACTTTGTCTAAGCAG
CTTGTTTGGTCTGTGACCACCTGCATTGATGCCAATTCAAGAAACGAGCTAAAATCCTTA
GTCAAGGGTCTCCTGTGCAAAAGCTCAGTCTATGAAAAGGACTGCTCTGATCTGAACAAG
GTGGATATATTTGCAATATGCCTGTCTTGTATAAGTTCACTTGTTAGTTTGCTTGAGGAG
GCAACTGCTACGAGTCCATCTGTAAAATTGACTAAGAAAGAAGACCGGACCCTGATTGAC
CGCATATCTAAGCAGGTTGACAACATCATATGGCTGCTTGAAATTTTGCTCGATCACCAG
ATGGCAGAGGACTTGGTGGATATATGGACCAAACAAAGTCAGTTGCTTGCAATGCATAAA
TGTGCATCTCCATTGGTCAGATACGAGCTTAGCCGGGTGACAGCTATGTTATTCATAGCA
ATGGGCACTGGGAAAATGCATTGCCGCTCTGAAGCAAGGTCGGGGCTTCTTCAGACATGG
TTTAGACCGATGCTATTGGACTTCGGATGGTTACAGAGATGCAAAAAAGGCCTAGACATG
AAGGCATTGGAGGAAGCGATGGGTCAAGCACTCCTTACTCTTCCTTTGAAGGAACAATAT
GTTCTGTTTATGGATTGGTTCAAGTGTTTCTCAAAGCATGGTACTGAATGCCCTAACCTT
AGCAAATCATTCCAGATATGGTGGCGACGATCATTCTTGAGAGGCTCTGAAACTCATGCT
AGTGAATCTAGGTAG