Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400073770
CDS Infomation

pacid=37466681 polypeptide=PGSC0003DMP400049933 locus=PGSC0003DMG400028660 ID=PGSC0003DMT400073770.v4.03 annot-version=v4.03
Sequence

ATGGATTTGGGGCAATTAATGTTGAGAGAAACTCAAATAATAGATAATAACAATAATAAG
GAAAAAAAGTATACTAATATTAGTACTAGTCATTATAATTCTAGTGCTACTTCTTCAATT
GCTTCACATGATGATTTGAGGAGTAGAATTGAATCATTTCATATGCTAGAAAAGGCTAAT
ATTTCTAAGAGTGAATCTGCTGAAAAGAAACTTTCATGGTTACGTTCTCAGATTATTGGT
GAAAATGTCGATTTCGAAACGCCTTTTGGGAAACGTAGGCTTACTTATGCTGATCATACT
GCCTCTGGGAGATCCCTTCACTATATCGAAAACTATATCATCAATAACGTCCTTCCTTTC
TATGGTAATAGTCATACTAGTGATAGTCATGTGGGTTATCAAACAACAAAAATAGTGCAT
GAAGCAGCTGCTTATGTGAAGAAATGCTTAGGTGGAGGAGATGAAGATGCAATTATATTT
TGTGGTTCTGGTTCTACTGCTGCCATTAAAAGGCTACAAGAAGTTATGGGGATTTCAGTC
CCTTCTATACTAAGAGAAAAAGTACTCACAAAATGCTTTCGCAATGAAACTAAAGAGAGA
TGGGTTGTGTTTGTTGGACCTTATGAACATCACTCTAACATTCTTTCATGGAGACAGAGT
TTAGCTGAGGTTGTGGAGATTGGATTGGACGAAAACGGGCTAGTAGACATGGAAGCCTTG
AGGGATCAGCTTGAGTTCTATAAGTCTACGAATAGACCATTGTTGGGTTCATTCTCAGCT
TGTAGTAATGTTACTGGGACTTATTCTGATACAAGAGCCATCGCTCGTCTACTTCATAAA
AATGGAGCTTTTGCTTGCTTTGATTTCGCAGCAAGTGGTCCATACGCGAAAATAGAGATG
AGATCAGGAGAGATAGATGGATACGATGCTGTTTTTATAAGTCCTCATAAGTTTCTTGGA
GGTCCAGGCACACCTGGAATTCTTCTAATCAACAAAGCACTCTATAGATTGGGGACTTCA
CCTCCATCTACTTGTGGGGGTGGTACTGTTGATTTTGTCAATCCCTACAATGAAAAGGAC
ACACTTTATGTGGAGAATATTGAAGAAAGGGAGGATGCAGGAACACCACCAATCATTCAG
AAAGTGAGAACAGCACTTGCATTTTGGGTGAAAGAGTTCATAAGTCATAAAGCAATTGAA
AGAATGGAACACACCTACATTGAACTTGCACTACAAAGGCTTCTCCCAAATCCTAACATA
TGGATTTTGGGAAATGTAACAGCAAAGAGACAAGCTGTGCTTTCTTTTCTCATTTATACT
ACAACTTACTCTTCGTCAAGTGATGGGAGTGGTGAAGACAATGAGTTTTACTTATGGAGA
GAGACAGGGAACAAGAAAGATAAGCCCCTTCACGGCCCTTTTGTGGCTAAGCTTCTTAAT
GACCTATTTGGTATTCAAGCTAGAGGAGGGTGTGCTTGCGCAGGACCCTATGGGCATATC
TTGCTCAAGGTTGATGAACCTCGCTCTCTTGCGTTCAAAGATGCAATTGAGATGGGCTAT
AGTGGAGTGAAGCCGGGATGGACAAGGGTCAGTTTCCCCTACTACATATCCAAGGAAGAA
TTTGAGTTTATTCTAGCAGCATTAGAATTCATAGCCATTTATGGACAAAGGTTCCTTCCT
TTGTACCATTTCAACTGGAAGAGTGGTGCTTGGACTTTCAAGAAAAAAGCTTTCAAGGAG
GCAATCATAGGAAGAGATCACAATTGCAATTTTTGTGGCTCACCAATGAAGGGGTTGAAC
CTAGGTTGCCACGACACTGAAGAGAACAACCATGTAGAAAGCCCCGCAAAAGAAGGTCTC
ATTTGCAAGTACGTAAAGTACCTTGAGACAGCCAAGCGCATTGCTAGCCTCCTTCCCAAA
TTCCCAGCTCAACGGTCCATACCTGAAGAAATAAACCCTAACCTAGTACCCTTCAGAGTC
TGA

Peptide Sequence

PEP ID

PGSC0003DMP400049933
PEP Infomation

pacid=37466681 transcript=PGSC0003DMT400073770 locus=PGSC0003DMG400028660 ID=PGSC0003DMT400073770.v4.03 annot-version=v4.03
Sequence

MDLGQLMLRETQIIDNNNNKEKKYTNISTSHYNSSATSSIASHDDLRSRIESFHMLEKAN
ISKSESAEKKLSWLRSQIIGENVDFETPFGKRRLTYADHTASGRSLHYIENYIINNVLPF
YGNSHTSDSHVGYQTTKIVHEAAAYVKKCLGGGDEDAIIFCGSGSTAAIKRLQEVMGISV
PSILREKVLTKCFRNETKERWVVFVGPYEHHSNILSWRQSLAEVVEIGLDENGLVDMEAL
RDQLEFYKSTNRPLLGSFSACSNVTGTYSDTRAIARLLHKNGAFACFDFAASGPYAKIEM
RSGEIDGYDAVFISPHKFLGGPGTPGILLINKALYRLGTSPPSTCGGGTVDFVNPYNEKD
TLYVENIEEREDAGTPPIIQKVRTALAFWVKEFISHKAIERMEHTYIELALQRLLPNPNI
WILGNVTAKRQAVLSFLIYTTTYSSSSDGSGEDNEFYLWRETGNKKDKPLHGPFVAKLLN
DLFGIQARGGCACAGPYGHILLKVDEPRSLAFKDAIEMGYSGVKPGWTRVSFPYYISKEE
FEFILAALEFIAIYGQRFLPLYHFNWKSGAWTFKKKAFKEAIIGRDHNCNFCGSPMKGLN
LGCHDTEENNHVESPAKEGLICKYVKYLETAKRIASLLPKFPAQRSIPEEINPNLVPFRV
*

Transcript Sequence

Transcript ID

PGSC0003DMT400073770
Transcript Infomation

pacid=37466681 locus=PGSC0003DMG400028660 ID=PGSC0003DMT400073770.v4.03 annot-version=v4.03
Sequence

ATGGATTTGGGGCAATTAATGTTGAGAGAAACTCAAATAATAGATAATAACAATAATAAG
GAAAAAAAGTATACTAATATTAGTACTAGTCATTATAATTCTAGTGCTACTTCTTCAATT
GCTTCACATGATGATTTGAGGAGTAGAATTGAATCATTTCATATGCTAGAAAAGGCTAAT
ATTTCTAAGAGTGAATCTGCTGAAAAGAAACTTTCATGGTTACGTTCTCAGATTATTGGT
GAAAATGTCGATTTCGAAACGCCTTTTGGGAAACGTAGGCTTACTTATGCTGATCATACT
GCCTCTGGGAGATCCCTTCACTATATCGAAAACTATATCATCAATAACGTCCTTCCTTTC
TATGGTAATAGTCATACTAGTGATAGTCATGTGGGTTATCAAACAACAAAAATAGTGCAT
GAAGCAGCTGCTTATGTGAAGAAATGCTTAGGTGGAGGAGATGAAGATGCAATTATATTT
TGTGGTTCTGGTTCTACTGCTGCCATTAAAAGGCTACAAGAAGTTATGGGGATTTCAGTC
CCTTCTATACTAAGAGAAAAAGTACTCACAAAATGCTTTCGCAATGAAACTAAAGAGAGA
TGGGTTGTGTTTGTTGGACCTTATGAACATCACTCTAACATTCTTTCATGGAGACAGAGT
TTAGCTGAGGTTGTGGAGATTGGATTGGACGAAAACGGGCTAGTAGACATGGAAGCCTTG
AGGGATCAGCTTGAGTTCTATAAGTCTACGAATAGACCATTGTTGGGTTCATTCTCAGCT
TGTAGTAATGTTACTGGGACTTATTCTGATACAAGAGCCATCGCTCGTCTACTTCATAAA
AATGGAGCTTTTGCTTGCTTTGATTTCGCAGCAAGTGGTCCATACGCGAAAATAGAGATG
AGATCAGGAGAGATAGATGGATACGATGCTGTTTTTATAAGTCCTCATAAGTTTCTTGGA
GGTCCAGGCACACCTGGAATTCTTCTAATCAACAAAGCACTCTATAGATTGGGGACTTCA
CCTCCATCTACTTGTGGGGGTGGTACTGTTGATTTTGTCAATCCCTACAATGAAAAGGAC
ACACTTTATGTGGAGAATATTGAAGAAAGGGAGGATGCAGGAACACCACCAATCATTCAG
AAAGTGAGAACAGCACTTGCATTTTGGGTGAAAGAGTTCATAAGTCATAAAGCAATTGAA
AGAATGGAACACACCTACATTGAACTTGCACTACAAAGGCTTCTCCCAAATCCTAACATA
TGGATTTTGGGAAATGTAACAGCAAAGAGACAAGCTGTGCTTTCTTTTCTCATTTATACT
ACAACTTACTCTTCGTCAAGTGATGGGAGTGGTGAAGACAATGAGTTTTACTTATGGAGA
GAGACAGGGAACAAGAAAGATAAGCCCCTTCACGGCCCTTTTGTGGCTAAGCTTCTTAAT
GACCTATTTGGTATTCAAGCTAGAGGAGGGTGTGCTTGCGCAGGACCCTATGGGCATATC
TTGCTCAAGGTTGATGAACCTCGCTCTCTTGCGTTCAAAGATGCAATTGAGATGGGCTAT
AGTGGAGTGAAGCCGGGATGGACAAGGGTCAGTTTCCCCTACTACATATCCAAGGAAGAA
TTTGAGTTTATTCTAGCAGCATTAGAATTCATAGCCATTTATGGACAAAGGTTCCTTCCT
TTGTACCATTTCAACTGGAAGAGTGGTGCTTGGACTTTCAAGAAAAAAGCTTTCAAGGAG
GCAATCATAGGAAGAGATCACAATTGCAATTTTTGTGGCTCACCAATGAAGGGGTTGAAC
CTAGGTTGCCACGACACTGAAGAGAACAACCATGTAGAAAGCCCCGCAAAAGAAGGTCTC
ATTTGCAAGTACGTAAAGTACCTTGAGACAGCCAAGCGCATTGCTAGCCTCCTTCCCAAA
TTCCCAGCTCAACGGTCCATACCTGAAGAAATAAACCCTAACCTAGTACCCTTCAGAGTC
TGA