Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400073724
CDS Infomation

pacid=37447002 polypeptide=PGSC0003DMP400049897 locus=PGSC0003DMG400028641 ID=PGSC0003DMT400073724.v4.03 annot-version=v4.03
Sequence

ATGGAAGGTGTTTTACAAACAAGAGGGCTTCTTTCTTTGCCTTCTAAACCCAAAATCAAG
GCTTTTTACCCATTGCCTCAAGGGGGTCTAAGGAACAGATTCAATTCTTTAAGTAGTTTA
AAGCCTAATCCTCTTAATGGGGTTTCTTTATCTTCAAATGGGTTTCAAAAAGTTCAAGGC
TTTGACACAAAGCCTCAGTTGTTTGGCCAAAAGAAGAGGTGTTTTCCAATATGCAAAGCT
GAGGCTGCTGCTGCTGCTGGTGCAGCTGATGGACAGCCACTTTTTGTTGAAAAGGAGCAA
CCTAAGTTTATGGGGATTGAACTTGTGACCCTTAAGAAAATTATACCACTTGGGGCGATG
TTCTTTTGTATTCTGTTTAATTATACAATCCTTAGGGATACTAAGGATGTGTTGGTTGTA
ACAGCTAAAGGGTCCAGTGCTGAGATTATCCCTTTCTTGAAAACTTGGGTGAATTTGCCT
ATGGCTATTGGATTCATGCTTTTGTACACAAAGTTGGCTAATGTGTTGTCAAAGGAGGCT
CTTTTTTATACTGTTATACTTCCTTTTATTGCATTCTTTGGGGCGTTTGGTTTTGTTTTG
TATCCTCTTAGCAATTACTTTCACCCTACAGCTTTTGCTGATAAGCTTCTCAATACCCTT
GGTCCAAGATTTCTTGGACCAATTGCTATTCTGAGGATCTGGAGTTTCTGCTTGTTCTAT
GTCATGGCTGAGCTTTGGGGAAGTGTGGTGGTTTCAGTACTCTTTTGGGGATTTGCTAAT
CAGATCACGACTGTCGATGAGGCTAAGAGATTCTATCCTTTGTTTGGACTTGGAGCGAAT
GTTGCTCTTATTTTCTCTGGTCGCACAGTGAAGTACTTTTCTAGCTTGAGAAGCTCTTTA
GGTCCTGGAGTTGATGGTTGGGCCATCTCCCTGAAAGGAATGATGAGCATTGTTGTGATG
ATGGGTGGGGCAATCTGTTTCTTTTACTGGTGGGTGAATAGAAATGTTGCTCTCCCAACT
CGTAGCAAGAAGAAGAAGGTAAAACCTAACATGACCACAATGGAGAGCTTGAAGTTCTTG
GTCTCTTCAAAATATATCAGGGATCTTGCCACATTGGTTGTAGCATATGGCATTAGTATC
AACCTTGTTGAAGTTACATGGAAGTCAAAGCTCAAAGCTCAGTTCCCAAGCCCCAATGAA
TACTCCTCATTCATGGGTGACTTCTCAACTGCTACTGGAATAGCAACTTTCATAATGATG
TTGTTAAGTCAATGGATTTTCGACAAGTATGGGTGGGGAGCAGCAGCCAAGATAACACCT
ACAGTCTTGCTCCTAACCGGAGTTGGTTTCTTCTCCCTGCTTTTGTTTGGTGCCCCTCTA
GCACCTACTCTTGCGAAGTTTGGAATGACTCCTCTTCTAGCAGCTGTCTATGTGGGTGCA
ATGCAGAACATTTTCAGTAAGAGTGCAAAGTATAGTTTGTTTGACCCCTGCAAAGAAATG
GCCTACATTCCTTTGGATGAGGACACCAAGGTTAAAGGGAAGGCAGCAATCGATGTTGTC
TGCAATCCACTGGGAAAGTCTGGAGGAGCTTTGATACAACAATTCATGATTTTGACTTTT
GGTTCACTTGCCAGCTCGACACCCTACCTCGGCGGTGTGCTCTTAGTAATTGTTCTTGCA
TGGTTGGGAGCAGCCAAGTCTTTGGATGGACAGTTCACTCAATTACGCCAAGAAGAAGAT
CTTGAGAAGGAAATGGAGAGAGCATCGTTGAAGATCCCTGTCGTGTCTCAAAATGAAAAT
GGAAATGGTCCTCTCTCAAGTGGGTCATCACTAAATCCCGCTGGAGGTGACTCTACCAAC
GCTTCATCAGAACCCTCCTCCCCAAGGAGCCTGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400049897
PEP Infomation

pacid=37447002 transcript=PGSC0003DMT400073724 locus=PGSC0003DMG400028641 ID=PGSC0003DMT400073724.v4.03 annot-version=v4.03
Sequence

MEGVLQTRGLLSLPSKPKIKAFYPLPQGGLRNRFNSLSSLKPNPLNGVSLSSNGFQKVQG
FDTKPQLFGQKKRCFPICKAEAAAAAGAADGQPLFVEKEQPKFMGIELVTLKKIIPLGAM
FFCILFNYTILRDTKDVLVVTAKGSSAEIIPFLKTWVNLPMAIGFMLLYTKLANVLSKEA
LFYTVILPFIAFFGAFGFVLYPLSNYFHPTAFADKLLNTLGPRFLGPIAILRIWSFCLFY
VMAELWGSVVVSVLFWGFANQITTVDEAKRFYPLFGLGANVALIFSGRTVKYFSSLRSSL
GPGVDGWAISLKGMMSIVVMMGGAICFFYWWVNRNVALPTRSKKKKVKPNMTTMESLKFL
VSSKYIRDLATLVVAYGISINLVEVTWKSKLKAQFPSPNEYSSFMGDFSTATGIATFIMM
LLSQWIFDKYGWGAAAKITPTVLLLTGVGFFSLLLFGAPLAPTLAKFGMTPLLAAVYVGA
MQNIFSKSAKYSLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILTF
GSLASSTPYLGGVLLVIVLAWLGAAKSLDGQFTQLRQEEDLEKEMERASLKIPVVSQNEN
GNGPLSSGSSLNPAGGDSTNASSEPSSPRSL*

Transcript Sequence

Transcript ID

PGSC0003DMT400073724
Transcript Infomation

pacid=37447002 locus=PGSC0003DMG400028641 ID=PGSC0003DMT400073724.v4.03 annot-version=v4.03
Sequence

ATGGAAGGTGTTTTACAAACAAGAGGGCTTCTTTCTTTGCCTTCTAAACCCAAAATCAAG
GCTTTTTACCCATTGCCTCAAGGGGGTCTAAGGAACAGATTCAATTCTTTAAGTAGTTTA
AAGCCTAATCCTCTTAATGGGGTTTCTTTATCTTCAAATGGGTTTCAAAAAGTTCAAGGC
TTTGACACAAAGCCTCAGTTGTTTGGCCAAAAGAAGAGGTGTTTTCCAATATGCAAAGCT
GAGGCTGCTGCTGCTGCTGGTGCAGCTGATGGACAGCCACTTTTTGTTGAAAAGGAGCAA
CCTAAGTTTATGGGGATTGAACTTGTGACCCTTAAGAAAATTATACCACTTGGGGCGATG
TTCTTTTGTATTCTGTTTAATTATACAATCCTTAGGGATACTAAGGATGTGTTGGTTGTA
ACAGCTAAAGGGTCCAGTGCTGAGATTATCCCTTTCTTGAAAACTTGGGTGAATTTGCCT
ATGGCTATTGGATTCATGCTTTTGTACACAAAGTTGGCTAATGTGTTGTCAAAGGAGGCT
CTTTTTTATACTGTTATACTTCCTTTTATTGCATTCTTTGGGGCGTTTGGTTTTGTTTTG
TATCCTCTTAGCAATTACTTTCACCCTACAGCTTTTGCTGATAAGCTTCTCAATACCCTT
GGTCCAAGATTTCTTGGACCAATTGCTATTCTGAGGATCTGGAGTTTCTGCTTGTTCTAT
GTCATGGCTGAGCTTTGGGGAAGTGTGGTGGTTTCAGTACTCTTTTGGGGATTTGCTAAT
CAGATCACGACTGTCGATGAGGCTAAGAGATTCTATCCTTTGTTTGGACTTGGAGCGAAT
GTTGCTCTTATTTTCTCTGGTCGCACAGTGAAGTACTTTTCTAGCTTGAGAAGCTCTTTA
GGTCCTGGAGTTGATGGTTGGGCCATCTCCCTGAAAGGAATGATGAGCATTGTTGTGATG
ATGGGTGGGGCAATCTGTTTCTTTTACTGGTGGGTGAATAGAAATGTTGCTCTCCCAACT
CGTAGCAAGAAGAAGAAGGTAAAACCTAACATGACCACAATGGAGAGCTTGAAGTTCTTG
GTCTCTTCAAAATATATCAGGGATCTTGCCACATTGGTTGTAGCATATGGCATTAGTATC
AACCTTGTTGAAGTTACATGGAAGTCAAAGCTCAAAGCTCAGTTCCCAAGCCCCAATGAA
TACTCCTCATTCATGGGTGACTTCTCAACTGCTACTGGAATAGCAACTTTCATAATGATG
TTGTTAAGTCAATGGATTTTCGACAAGTATGGGTGGGGAGCAGCAGCCAAGATAACACCT
ACAGTCTTGCTCCTAACCGGAGTTGGTTTCTTCTCCCTGCTTTTGTTTGGTGCCCCTCTA
GCACCTACTCTTGCGAAGTTTGGAATGACTCCTCTTCTAGCAGCTGTCTATGTGGGTGCA
ATGCAGAACATTTTCAGTAAGAGTGCAAAGTATAGTTTGTTTGACCCCTGCAAAGAAATG
GCCTACATTCCTTTGGATGAGGACACCAAGGTTAAAGGGAAGGCAGCAATCGATGTTGTC
TGCAATCCACTGGGAAAGTCTGGAGGAGCTTTGATACAACAATTCATGATTTTGACTTTT
GGTTCACTTGCCAGCTCGACACCCTACCTCGGCGGTGTGCTCTTAGTAATTGTTCTTGCA
TGGTTGGGAGCAGCCAAGTCTTTGGATGGACAGTTCACTCAATTACGCCAAGAAGAAGAT
CTTGAGAAGGAAATGGAGAGAGCATCGTTGAAGATCCCTGTCGTGTCTCAAAATGAAAAT
GGAAATGGTCCTCTCTCAAGTGGGTCATCACTAAATCCCGCTGGAGGTGACTCTACCAAC
GCTTCATCAGAACCCTCCTCCCCAAGGAGCCTGTAA