Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400073715
CDS Infomation

pacid=37446795 polypeptide=PGSC0003DMP400049890 locus=PGSC0003DMG400028635 ID=PGSC0003DMT400073715.v4.03 annot-version=v4.03
Sequence

ATGGTACTAAGTTCAAATAGAGTTGAAGATTTATCAACACATGCATGCAATGAAGAGGGT
TTTGAATTACCAATATCAAATCATGATGTACCACCACTTGAAGTACATAGAGTTTGCTTG
CCACCACACAAAACAACACTTGAAAAACTAAGACAAAGGTTGTTAGAAGTGTTTTTCCCA
GATGATCCACTTCATAAGTTCAAGAATCAAACATGTTTGATGAAGTTGTATTTGGGACTT
CAATTTTTTTTTCCTGTTTTTGAGTGGGGCCCTCAGTATAATCTCAAGTTACTAAGGCCT
GATATCATATCTGGACTTACCATTGCTAGTCTTGCTATACCACAAGGAATTAGCTATGCT
AAACTTGCTAATTTGCCACCTATTGTTGGTCTATATTCAAGCTTTGTGCCACCATTGATT
TATTCAGTTTTGGGAAGTTCAAGACACTTAGCAGTTGGTCCAGTTTCAATTGCATCACTT
GTTATGGGCACAATGCTAAGTGAAGTTGTTTCTTACACTGAACAACCAATTCTTTACCTT
CAATTGGCTTTTACAGCTACACTTTTTGCTGGAGTTTTTCAGGCTTCACTCGGATTCTTC
AGGTTGGGATTTATCATCGATTTTCTGTCAAAGGCAACGTTAGTCGGGTTCATGGCTGGT
GCAGCAGTCATAGTTTCATTGCAACAACTGAAAGGGTTGCTAGGAATGGTCCATTTCACA
AGCAAGATGCAAATAGTTCCTGTATTGTCTTCTGTTTTCCAGCACAAGGACGAATGGTCT
TGGCAAACCATTGTTATGGGCATGTGTTTCCTCGCGTTCCTGCTAACAACAAGGCAAATC
AGCACCAGGAATCCGAAATTTTTCTGGCTTTCAGCAGCATCTCCGTTGGCCTCAGTTGTT
CTATCAACTCTTGTAGTTGCCTGCCTTAAGTCGAAAGCTCATGGGATTCAAACTATTGGA
CACTTACCAAAGGGTCTAAATCCACCCTCAATGAACATGTTATATCTGAGTGGTCCTTAT
CTGCCTCTTGCCATCAAAACTGGCATTGTATCCGGGATCTTAGCACTCACAGAAGGGATT
GCAGTAGGAAGGACATTTGCTGCTTTGAAGAATTACCAAGTTGATGGAAACAAAGAAATG
ATGGCTATTGGACTAATGAACATGGCTGGATCCTGTTCTTCTTGCTATGTTACAACAGGA
TCATTTTCTCGATCAGCAGTAAATTACAACGCTGGGGCACAAACAGTTGTTTCAAACATA
ATAATGGCAACAGCTGTGTTAATCACCCTGCTGTTTCTAATGCCACTGTTCTATTACACT
CCCATTGTCATCTTGGCAGCAATCATCATAACAGCAGTGATTGGCCTAATCGATTATCAG
GCTGCATTACGGTTATGGAAAGTTGACAAGCTCGATTTCTTAGCTTGCTTGTGTTCGTTT
TTTGGTGTTCTTTTCATCTCAGTACCTCTCGGCCTAGCCATTGCAGTTGGAGTTTCGGTT
TTTAAGATCTTGTTGCATGTTACAAGGCCAAATACTGGTGTCTTGGGCAATATTCCTGGA
ACTCAAGTATATCAAAACATGAACAGATATAGAACAGCTGTTAGAATTCCTTCTTTCCTG
ATCCTAGCTGTAGAAGCTCCCTTCTACTTTGCAAATTCTACCTACTTACAAGAAAGGATA
TTGAGATGGATACGCGAAGAGGAAGAGAGGATAGAAGCCAACCAAGAAACTGCAATCAAA
TGTGTAATTATCGACATGACAGCTGTGTCGTCCATAGACTCAAGTGGCATTGACACAATA
TGTGAACTAAGAAAGACGCTGGATAAACGATCTCTTAAGCTTGTGCTGGCAAATCCAGGT
GGGAATGTTACGGAAAAGCTACATGAATCTAATGCTCTTGAGGGCTTTGGACTAAATGGA
ATATATCTGACAGTTTCTGAAGCTGTGGCTGATATCTCATCTTTGTGGAAGACTGAAACT
GAATTGCCAATATAA

Peptide Sequence

PEP ID

PGSC0003DMP400049890
PEP Infomation

pacid=37446795 transcript=PGSC0003DMT400073715 locus=PGSC0003DMG400028635 ID=PGSC0003DMT400073715.v4.03 annot-version=v4.03
Sequence

MVLSSNRVEDLSTHACNEEGFELPISNHDVPPLEVHRVCLPPHKTTLEKLRQRLLEVFFP
DDPLHKFKNQTCLMKLYLGLQFFFPVFEWGPQYNLKLLRPDIISGLTIASLAIPQGISYA
KLANLPPIVGLYSSFVPPLIYSVLGSSRHLAVGPVSIASLVMGTMLSEVVSYTEQPILYL
QLAFTATLFAGVFQASLGFFRLGFIIDFLSKATLVGFMAGAAVIVSLQQLKGLLGMVHFT
SKMQIVPVLSSVFQHKDEWSWQTIVMGMCFLAFLLTTRQISTRNPKFFWLSAASPLASVV
LSTLVVACLKSKAHGIQTIGHLPKGLNPPSMNMLYLSGPYLPLAIKTGIVSGILALTEGI
AVGRTFAALKNYQVDGNKEMMAIGLMNMAGSCSSCYVTTGSFSRSAVNYNAGAQTVVSNI
IMATAVLITLLFLMPLFYYTPIVILAAIIITAVIGLIDYQAALRLWKVDKLDFLACLCSF
FGVLFISVPLGLAIAVGVSVFKILLHVTRPNTGVLGNIPGTQVYQNMNRYRTAVRIPSFL
ILAVEAPFYFANSTYLQERILRWIREEEERIEANQETAIKCVIIDMTAVSSIDSSGIDTI
CELRKTLDKRSLKLVLANPGGNVTEKLHESNALEGFGLNGIYLTVSEAVADISSLWKTET
ELPI*

Transcript Sequence

Transcript ID

PGSC0003DMT400073715
Transcript Infomation

pacid=37446795 locus=PGSC0003DMG400028635 ID=PGSC0003DMT400073715.v4.03 annot-version=v4.03
Sequence

ATGGTACTAAGTTCAAATAGAGTTGAAGATTTATCAACACATGCATGCAATGAAGAGGGT
TTTGAATTACCAATATCAAATCATGATGTACCACCACTTGAAGTACATAGAGTTTGCTTG
CCACCACACAAAACAACACTTGAAAAACTAAGACAAAGGTTGTTAGAAGTGTTTTTCCCA
GATGATCCACTTCATAAGTTCAAGAATCAAACATGTTTGATGAAGTTGTATTTGGGACTT
CAATTTTTTTTTCCTGTTTTTGAGTGGGGCCCTCAGTATAATCTCAAGTTACTAAGGCCT
GATATCATATCTGGACTTACCATTGCTAGTCTTGCTATACCACAAGGAATTAGCTATGCT
AAACTTGCTAATTTGCCACCTATTGTTGGTCTATATTCAAGCTTTGTGCCACCATTGATT
TATTCAGTTTTGGGAAGTTCAAGACACTTAGCAGTTGGTCCAGTTTCAATTGCATCACTT
GTTATGGGCACAATGCTAAGTGAAGTTGTTTCTTACACTGAACAACCAATTCTTTACCTT
CAATTGGCTTTTACAGCTACACTTTTTGCTGGAGTTTTTCAGGCTTCACTCGGATTCTTC
AGGTTGGGATTTATCATCGATTTTCTGTCAAAGGCAACGTTAGTCGGGTTCATGGCTGGT
GCAGCAGTCATAGTTTCATTGCAACAACTGAAAGGGTTGCTAGGAATGGTCCATTTCACA
AGCAAGATGCAAATAGTTCCTGTATTGTCTTCTGTTTTCCAGCACAAGGACGAATGGTCT
TGGCAAACCATTGTTATGGGCATGTGTTTCCTCGCGTTCCTGCTAACAACAAGGCAAATC
AGCACCAGGAATCCGAAATTTTTCTGGCTTTCAGCAGCATCTCCGTTGGCCTCAGTTGTT
CTATCAACTCTTGTAGTTGCCTGCCTTAAGTCGAAAGCTCATGGGATTCAAACTATTGGA
CACTTACCAAAGGGTCTAAATCCACCCTCAATGAACATGTTATATCTGAGTGGTCCTTAT
CTGCCTCTTGCCATCAAAACTGGCATTGTATCCGGGATCTTAGCACTCACAGAAGGGATT
GCAGTAGGAAGGACATTTGCTGCTTTGAAGAATTACCAAGTTGATGGAAACAAAGAAATG
ATGGCTATTGGACTAATGAACATGGCTGGATCCTGTTCTTCTTGCTATGTTACAACAGGA
TCATTTTCTCGATCAGCAGTAAATTACAACGCTGGGGCACAAACAGTTGTTTCAAACATA
ATAATGGCAACAGCTGTGTTAATCACCCTGCTGTTTCTAATGCCACTGTTCTATTACACT
CCCATTGTCATCTTGGCAGCAATCATCATAACAGCAGTGATTGGCCTAATCGATTATCAG
GCTGCATTACGGTTATGGAAAGTTGACAAGCTCGATTTCTTAGCTTGCTTGTGTTCGTTT
TTTGGTGTTCTTTTCATCTCAGTACCTCTCGGCCTAGCCATTGCAGTTGGAGTTTCGGTT
TTTAAGATCTTGTTGCATGTTACAAGGCCAAATACTGGTGTCTTGGGCAATATTCCTGGA
ACTCAAGTATATCAAAACATGAACAGATATAGAACAGCTGTTAGAATTCCTTCTTTCCTG
ATCCTAGCTGTAGAAGCTCCCTTCTACTTTGCAAATTCTACCTACTTACAAGAAAGGATA
TTGAGATGGATACGCGAAGAGGAAGAGAGGATAGAAGCCAACCAAGAAACTGCAATCAAA
TGTGTAATTATCGACATGACAGCTGTGTCGTCCATAGACTCAAGTGGCATTGACACAATA
TGTGAACTAAGAAAGACGCTGGATAAACGATCTCTTAAGCTTGTGCTGGCAAATCCAGGT
GGGAATGTTACGGAAAAGCTACATGAATCTAATGCTCTTGAGGGCTTTGGACTAAATGGA
ATATATCTGACAGTTTCTGAAGCTGTGGCTGATATCTCATCTTTGTGGAAGACTGAAACT
GAATTGCCAATATAA