Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400073713
CDS Infomation

pacid=37447750 polypeptide=PGSC0003DMP400049888 locus=PGSC0003DMG400028634 ID=PGSC0003DMT400073713.v4.03 annot-version=v4.03
Sequence

ATGGCTAAATCTGAAGGAAAAGCAATTGGCATTGATCTTGGTACAACTTATAGTTGTGTT
GGTGTATGGCAAAACGATCGTGTAGAGATTATTCCAAATGATCAAGGCAACAGAACAACT
CCATCTTATGTAGCTTTCACAGATACTGAAAGACTTATTGGTGATGCAGCCAAGAATCAA
GTTGCTATGAATCCACAAAACACTGTCTTTGATGCTAAACGTCTTATCGGTCGACGTTTC
TCTGATCCAACTGTACAGGCTGACATGAAACATTGGCCATTTAAGGTTGTTCCAGGACCT
GGTGACAAGCCTATGATTGTTGTTAATTTCAAGAATGAGGAGAAACAGTTTGCACCAGAG
GAGATTTCTTCTATGGTTTTGATTAAAATGAAGGAAACTGCTGAGGCTTTTTTGGGACAA
ACTGTTAAGAATGCTGTGGTTACTGTTCCAGCTTACTTTAATGATTCTCAAAGACAAGCT
ACTAAAGATGCTGGTGCTATTGCAGGGTTGAATGTAATGAGGATTATTAATGAACCTACT
GCAGCTGCAATTGCTTATGGTTTGGATAAAAAGGCTTCAAAGAATGGTGAAAAGAATGTG
TTGATCTTTGATCTTGGTGGTGGAACTTTTGATGTTTCATTGTTGACAATTGAAGAAGGG
ATTTTTGAAGTTAAGGCAACTGCTGGTGACACACATTTAGGTGGTGAAGATTTTGATAAC
AGGCTTGTGAGTCATTTTGTGCAAGAATTCAAGAGGAAGCATAAGAAGGATATTACTAGT
AATGCAAGGGCTTTGAGGAGGTTGAGGACTGCTTGTGAGAGGGCTAAGAGGACTCTGTCA
TCAACAAGTCAAACAACAATTGAAGTTGATTCTTTGTATGAAGGAATTGATTTTTATGCT
ACAATTACAAGAGCTAGATTTGAGGAGCTGAATATGGACTTGTTTAGGAAGTGTATGGAG
CCAGTAGAGAAATGTTTGAGGGATGCAAAGATGGATAAAAGTCAAGTTCATGATGTGGTT
CTTGTTGGTGGTTCTACTAGGATACCAAAAGTGCAGCAATTGTTGCAAGATTTCTTTAAT
GGTAAGGAGCTTTGTAAGAGTATTAATCCTGATGAGGCTGTGGCATATGGAGCTGCAGTT
CAAGCTGCAATTTTGAGTGGAGAAGGTGATCAAAAGGTTCAAGATTTGCTGCTTCTTGAT
GTCACCCCACTCAGTCTTGGTATTGAGACTGCTGGTGGTGTGATGACAGTTTTGATTCCA
AGAAACACTACTATTCCAACCAAGAAAGAGCAAATCTTTTCCACATACTCTGACAATCAA
CCAGCTGTGTTAATTCAGGTGTATGAAGGAGAGAGATCTTTAACCAAGGACAACAACCTT
CTTGGTAAGTTTGAGCTAAAGGGTATCCCACCTGCCCCGAGAGGTGTGCCACAGATCAAT
GTCTGTTTCGACATTGATGCTAATGGTATCCTCAATGTGTCGGCGGAGGACAAGACTGCT
AGGGTTAAGAACAAGATTACTATTACAAATGACAAAGGAAGGCTAAGTAAAGAAGAGATA
GAGAGAATGGTTGAAGAAGCTGAGAGGTACAAGTCTGAGGATGAGGCAATGAAGAGGAAA
GTGGAGGCCAAGAACGCGTTAGAGAATTACGCGTATAACATGAGGAATACTATAAAGGAT
GAGAAGATTTCAGGGAAGTTGGATCCTTCAGAGAAGCAGAAGATTGAGAAGGCTGTTGAT
GAAACAATTGAATGGCTGGATAGGAATCAATTGGCTGAAGTTGATGAATTTGAAGACAAA
TTGAAGGAGTTGGAGAAGTTGTGTAATCCAATTATTGGAAAAATGTATCAAGGTGGTGCA
GGTTCTGATTATGGAACTGGAAATAGTGGTGCAGGGCCTAAAATTGAGGAAGTTGATTAA

Peptide Sequence

PEP ID

PGSC0003DMP400049888
PEP Infomation

pacid=37447750 transcript=PGSC0003DMT400073713 locus=PGSC0003DMG400028634 ID=PGSC0003DMT400073713.v4.03 annot-version=v4.03
Sequence

MAKSEGKAIGIDLGTTYSCVGVWQNDRVEIIPNDQGNRTTPSYVAFTDTERLIGDAAKNQ
VAMNPQNTVFDAKRLIGRRFSDPTVQADMKHWPFKVVPGPGDKPMIVVNFKNEEKQFAPE
EISSMVLIKMKETAEAFLGQTVKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPT
AAAIAYGLDKKASKNGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDN
RLVSHFVQEFKRKHKKDITSNARALRRLRTACERAKRTLSSTSQTTIEVDSLYEGIDFYA
TITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSQVHDVVLVGGSTRIPKVQQLLQDFFN
GKELCKSINPDEAVAYGAAVQAAILSGEGDQKVQDLLLLDVTPLSLGIETAGGVMTVLIP
RNTTIPTKKEQIFSTYSDNQPAVLIQVYEGERSLTKDNNLLGKFELKGIPPAPRGVPQIN
VCFDIDANGILNVSAEDKTARVKNKITITNDKGRLSKEEIERMVEEAERYKSEDEAMKRK
VEAKNALENYAYNMRNTIKDEKISGKLDPSEKQKIEKAVDETIEWLDRNQLAEVDEFEDK
LKELEKLCNPIIGKMYQGGAGSDYGTGNSGAGPKIEEVD*

Transcript Sequence

Transcript ID

PGSC0003DMT400073713
Transcript Infomation

pacid=37447750 locus=PGSC0003DMG400028634 ID=PGSC0003DMT400073713.v4.03 annot-version=v4.03
Sequence

ATGGCTAAATCTGAAGGAAAAGCAATTGGCATTGATCTTGGTACAACTTATAGTTGTGTT
GGTGTATGGCAAAACGATCGTGTAGAGATTATTCCAAATGATCAAGGCAACAGAACAACT
CCATCTTATGTAGCTTTCACAGATACTGAAAGACTTATTGGTGATGCAGCCAAGAATCAA
GTTGCTATGAATCCACAAAACACTGTCTTTGATGCTAAACGTCTTATCGGTCGACGTTTC
TCTGATCCAACTGTACAGGCTGACATGAAACATTGGCCATTTAAGGTTGTTCCAGGACCT
GGTGACAAGCCTATGATTGTTGTTAATTTCAAGAATGAGGAGAAACAGTTTGCACCAGAG
GAGATTTCTTCTATGGTTTTGATTAAAATGAAGGAAACTGCTGAGGCTTTTTTGGGACAA
ACTGTTAAGAATGCTGTGGTTACTGTTCCAGCTTACTTTAATGATTCTCAAAGACAAGCT
ACTAAAGATGCTGGTGCTATTGCAGGGTTGAATGTAATGAGGATTATTAATGAACCTACT
GCAGCTGCAATTGCTTATGGTTTGGATAAAAAGGCTTCAAAGAATGGTGAAAAGAATGTG
TTGATCTTTGATCTTGGTGGTGGAACTTTTGATGTTTCATTGTTGACAATTGAAGAAGGG
ATTTTTGAAGTTAAGGCAACTGCTGGTGACACACATTTAGGTGGTGAAGATTTTGATAAC
AGGCTTGTGAGTCATTTTGTGCAAGAATTCAAGAGGAAGCATAAGAAGGATATTACTAGT
AATGCAAGGGCTTTGAGGAGGTTGAGGACTGCTTGTGAGAGGGCTAAGAGGACTCTGTCA
TCAACAAGTCAAACAACAATTGAAGTTGATTCTTTGTATGAAGGAATTGATTTTTATGCT
ACAATTACAAGAGCTAGATTTGAGGAGCTGAATATGGACTTGTTTAGGAAGTGTATGGAG
CCAGTAGAGAAATGTTTGAGGGATGCAAAGATGGATAAAAGTCAAGTTCATGATGTGGTT
CTTGTTGGTGGTTCTACTAGGATACCAAAAGTGCAGCAATTGTTGCAAGATTTCTTTAAT
GGTAAGGAGCTTTGTAAGAGTATTAATCCTGATGAGGCTGTGGCATATGGAGCTGCAGTT
CAAGCTGCAATTTTGAGTGGAGAAGGTGATCAAAAGGTTCAAGATTTGCTGCTTCTTGAT
GTCACCCCACTCAGTCTTGGTATTGAGACTGCTGGTGGTGTGATGACAGTTTTGATTCCA
AGAAACACTACTATTCCAACCAAGAAAGAGCAAATCTTTTCCACATACTCTGACAATCAA
CCAGCTGTGTTAATTCAGGTGTATGAAGGAGAGAGATCTTTAACCAAGGACAACAACCTT
CTTGGTAAGTTTGAGCTAAAGGGTATCCCACCTGCCCCGAGAGGTGTGCCACAGATCAAT
GTCTGTTTCGACATTGATGCTAATGGTATCCTCAATGTGTCGGCGGAGGACAAGACTGCT
AGGGTTAAGAACAAGATTACTATTACAAATGACAAAGGAAGGCTAAGTAAAGAAGAGATA
GAGAGAATGGTTGAAGAAGCTGAGAGGTACAAGTCTGAGGATGAGGCAATGAAGAGGAAA
GTGGAGGCCAAGAACGCGTTAGAGAATTACGCGTATAACATGAGGAATACTATAAAGGAT
GAGAAGATTTCAGGGAAGTTGGATCCTTCAGAGAAGCAGAAGATTGAGAAGGCTGTTGAT
GAAACAATTGAATGGCTGGATAGGAATCAATTGGCTGAAGTTGATGAATTTGAAGACAAA
TTGAAGGAGTTGGAGAAGTTGTGTAATCCAATTATTGGAAAAATGTATCAAGGTGGTGCA
GGTTCTGATTATGGAACTGGAAATAGTGGTGCAGGGCCTAAAATTGAGGAAGTTGATTAA