Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400073709
CDS Infomation

pacid=37447245 polypeptide=PGSC0003DMP400049885 locus=PGSC0003DMG400028632 ID=PGSC0003DMT400073709.v4.03 annot-version=v4.03
Sequence

ATGACAATTCTTAATCATCATCATGATGAGCAACCACATTTTGTGTTACTTCCTTTTATG
GCACAAGGCCATACAATCCCTATAATAGACATAGCTCGTTTATTAGCACAAAGAGGTGTT
ATTGTCACAATACTTATGACACCTTTAAATGCCATAAGGTTCAATAATGTCATTGCCCGC
GCAGTCGAAAAAGGACTCAATATTCATATAATTCACCTCGAGTTTCCAAGTTTAGAGGCA
GGGTTACCACAAGATTGTGAAAATTGTGACATGATTTTATCAATAGACATGATAAATAAG
TTCTTTAATGCTACTCAAATGCTTGAGACACAAGTGGAAGTGTTGTTGCAAGATTTGAAA
CCAAATTGTCTAATTTCTGATTTGTGTTTTCCTTGGACAACAAATGTTGCTAAGAGGATT
GGCATACCTAGGATTGTTTTTCATGGGATGGGAAGTTTTTCTTTGTTGTGTTTGCATAAT
TTGAGAGATGGGAAGTTGTTGGAGAGTGTTGGTTCTGAGAATGAATACTTTTCAGTGCCT
GGACTTCCAGACAAAGTTGAAGTGACAAAAGCTCAACTAAAAGCATTAGTGGATCCAAGC
AATCCTGAATGGAGAGAACTTGGAGACCAAATGAAGGAGGGAGAGGCTCAAGCTTATGGA
ATTGTGGTGAATAGCTTTGAGGAGTTGGAACCTCAATATGTGCAAGGAGTGAAAAAGGCC
AAAGGTAAGAAGGTTTGGACAATTGGTCCTGTTTCCTTATGCAACAAAGAGAAACAAGAC
AAAGTTGAAAGAGGAAACAAGGCTTCAATTGATGAACACCACTGCCTAAAATGGCTTGAT
TCTAAGGAACAAGATTCCGTGCTCTACGTTTGTCTTGGGAGTCTATCGCACTTGCCAACA
TCACAAATGATTGAACTTGCACTTGGTTTAGAGTCATCTAAACGACCCTTCGTATGGGTC
ATTAGACACATATCAAATGGATTTAGAAAATGGCTAAATGAAGAGAACTTTGAGGAAAGA
GTTGCAAAACAAGGGATTTTAATCAATGGTTGGGCACCACAAGTACTAATACTATCTCAT
CCTTCGATAGGAGGATTCCTGACACACTGTGGATGGAACTCGATCTTAGAAGGGATATCG
GTTGGTGTCCCAATGATCACTTGGCCATTATTTGCTGAACAATTTTGTAATGAGAAGCTC
ATTGTGAATGTACTCAAGACAGGAGTGAAGGGTGGTATGGAGAATCCAGTGATGTTTTTA
GAGGATGAAAAAGTGTGTGCACAATTGAAGAAAGATGATATTAAGATGGTTATTGAAAGA
GTAATGGGGGGAGAAGAGGAAGCAAAAATGAGAAGAGAAAGAGCTAAAAAGCTTGGAGAA
ATGGCAATAAGGGCTGTGGAAGGAGGTTCATCTCACTTTAATTTGACAAAACTAATAGAA
GATGTCACACAACAAGCAAAAATTGGGGGTTTTAAGTCTAGCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400049885
PEP Infomation

pacid=37447245 transcript=PGSC0003DMT400073709 locus=PGSC0003DMG400028632 ID=PGSC0003DMT400073709.v4.03 annot-version=v4.03
Sequence

MTILNHHHDEQPHFVLLPFMAQGHTIPIIDIARLLAQRGVIVTILMTPLNAIRFNNVIAR
AVEKGLNIHIIHLEFPSLEAGLPQDCENCDMILSIDMINKFFNATQMLETQVEVLLQDLK
PNCLISDLCFPWTTNVAKRIGIPRIVFHGMGSFSLLCLHNLRDGKLLESVGSENEYFSVP
GLPDKVEVTKAQLKALVDPSNPEWRELGDQMKEGEAQAYGIVVNSFEELEPQYVQGVKKA
KGKKVWTIGPVSLCNKEKQDKVERGNKASIDEHHCLKWLDSKEQDSVLYVCLGSLSHLPT
SQMIELALGLESSKRPFVWVIRHISNGFRKWLNEENFEERVAKQGILINGWAPQVLILSH
PSIGGFLTHCGWNSILEGISVGVPMITWPLFAEQFCNEKLIVNVLKTGVKGGMENPVMFL
EDEKVCAQLKKDDIKMVIERVMGGEEEAKMRRERAKKLGEMAIRAVEGGSSHFNLTKLIE
DVTQQAKIGGFKSS*

Transcript Sequence

Transcript ID

PGSC0003DMT400073709
Transcript Infomation

pacid=37447245 locus=PGSC0003DMG400028632 ID=PGSC0003DMT400073709.v4.03 annot-version=v4.03
Sequence

ATGACAATTCTTAATCATCATCATGATGAGCAACCACATTTTGTGTTACTTCCTTTTATG
GCACAAGGCCATACAATCCCTATAATAGACATAGCTCGTTTATTAGCACAAAGAGGTGTT
ATTGTCACAATACTTATGACACCTTTAAATGCCATAAGGTTCAATAATGTCATTGCCCGC
GCAGTCGAAAAAGGACTCAATATTCATATAATTCACCTCGAGTTTCCAAGTTTAGAGGCA
GGGTTACCACAAGATTGTGAAAATTGTGACATGATTTTATCAATAGACATGATAAATAAG
TTCTTTAATGCTACTCAAATGCTTGAGACACAAGTGGAAGTGTTGTTGCAAGATTTGAAA
CCAAATTGTCTAATTTCTGATTTGTGTTTTCCTTGGACAACAAATGTTGCTAAGAGGATT
GGCATACCTAGGATTGTTTTTCATGGGATGGGAAGTTTTTCTTTGTTGTGTTTGCATAAT
TTGAGAGATGGGAAGTTGTTGGAGAGTGTTGGTTCTGAGAATGAATACTTTTCAGTGCCT
GGACTTCCAGACAAAGTTGAAGTGACAAAAGCTCAACTAAAAGCATTAGTGGATCCAAGC
AATCCTGAATGGAGAGAACTTGGAGACCAAATGAAGGAGGGAGAGGCTCAAGCTTATGGA
ATTGTGGTGAATAGCTTTGAGGAGTTGGAACCTCAATATGTGCAAGGAGTGAAAAAGGCC
AAAGGTAAGAAGGTTTGGACAATTGGTCCTGTTTCCTTATGCAACAAAGAGAAACAAGAC
AAAGTTGAAAGAGGAAACAAGGCTTCAATTGATGAACACCACTGCCTAAAATGGCTTGAT
TCTAAGGAACAAGATTCCGTGCTCTACGTTTGTCTTGGGAGTCTATCGCACTTGCCAACA
TCACAAATGATTGAACTTGCACTTGGTTTAGAGTCATCTAAACGACCCTTCGTATGGGTC
ATTAGACACATATCAAATGGATTTAGAAAATGGCTAAATGAAGAGAACTTTGAGGAAAGA
GTTGCAAAACAAGGGATTTTAATCAATGGTTGGGCACCACAAGTACTAATACTATCTCAT
CCTTCGATAGGAGGATTCCTGACACACTGTGGATGGAACTCGATCTTAGAAGGGATATCG
GTTGGTGTCCCAATGATCACTTGGCCATTATTTGCTGAACAATTTTGTAATGAGAAGCTC
ATTGTGAATGTACTCAAGACAGGAGTGAAGGGTGGTATGGAGAATCCAGTGATGTTTTTA
GAGGATGAAAAAGTGTGTGCACAATTGAAGAAAGATGATATTAAGATGGTTATTGAAAGA
GTAATGGGGGGAGAAGAGGAAGCAAAAATGAGAAGAGAAAGAGCTAAAAAGCTTGGAGAA
ATGGCAATAAGGGCTGTGGAAGGAGGTTCATCTCACTTTAATTTGACAAAACTAATAGAA
GATGTCACACAACAAGCAAAAATTGGGGGTTTTAAGTCTAGCTAA