Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400073684
CDS Infomation

pacid=37446266 polypeptide=PGSC0003DMP400049863 locus=PGSC0003DMG400028620 ID=PGSC0003DMT400073684.v4.03 annot-version=v4.03
Sequence

ATGGCTTCTGGGGCGAACTCTTTGATGTGGTTCAGGAAGGGTTTGAGACTCCATGATAAT
CCAGCTTTAGAGTATGCAGCTAAAGGGTCGAAGTTTCTGTACCCGGTTTTCGTGATTGAT
CCACACTATATGGAGCCTGATCCGACTGCGTTTTCTCTGGGTTCCTCAAAAGCCGGGTTG
AACCGGATACAATTTTTGCTTGAAAGCCTTGTTGATCTCGATTTGAGTCTTAAGAAGGTT
GGTTCACGTTTGTTGGTGCTCAAGGGTGACCCTGGTGAGGTTTTGATTCGCTGCTTGAAG
GAGTGGAGCATAGGGAAACTTTGCTTTGAGTATGACACAGAGCCCTACTATCAAGCTTTA
GATGAGAAAGTCAAGGGCTATGTTTCTGGAACTGGCGTAGAGATTTTCTCTCCTGTGAGC
CATACCCTCTACAATCCTGCCGATATAATACGTAAGAATGGTGGATCCCCACCTCTGAGT
TATCAGTCTTTCCTCAAACTGGCTGGGCAACCATCTTGGGCAACAACTCCTCTTTTAACA
ACCATATCTTCACTTCCTCCTATTGGAAATACTGGAAGTTTTGCAGTCTCAGAAGTTCCA
ACTGTCAGAGAACTTGGTTATGAAGATTTAGCAGAGGACGAAAGGACTCCTTTTAAAGGT
GGAGAATCAGAAGCACTGAAGAGATTGAGAGAATCAATTGCTAACAAGGAATGGGTTGCA
AATTTTGAGAAACCCAAGGGTGATCCATCTGCATTTCTAAAACCAGCAACAACTGTTTTA
TCACCCTACTTAAAGTTTGGATGTCTCTCTTCCAGGTACTTCTACCAGTGCATTCAGGAC
ATTCTGAAATGCTCTAAAAAGCATACTTCTCCACCTGTTTCTCTTCTTGGACAGTTGTTA
TGGCGCGACTTTTTCTACACAGCTGCCTTCGGGACTCCTAACTTTAATCAGATGAAGGGT
AACAGAATATGCAAACAGATACCTTGGAAGAATGATGATGAATTGCTAGCTGCTTGGAGA
GATTCCAGGACAGGGTTTCCTTGGATTGACGCCATAATGGTCCAGCTTCGAAAGTGGGGT
TGGATCCACCATCTTGCTCGACACAGTGTTGCATGCTTTTTAACTCGTGGGGATCTGTTT
GTGCATTGGGAGAGAGGACGTCATGTTTTTGAAAGACTGCTTATTGACTCTGATTGGGCA
ATCAACAATGGAAACTGGTTGTGGCTATCATGCTCTTCATTTTTTTACCAGTATAATCGG
ATTTATTCACCAATCTCATTTGGAAAAAAGTATGATTCTGCCGGGAACTATATCAGGCAT
TTTCTTCCTGTTTTAAAAGATATGCCTAAGGAGTACATATATGAGCCTTGGACTGCTCCC
ATAAGTGTCCAACGTAAAGCAAAATGCATCATCGGCATAGATTATCCCAAACCAGTTGTT
TCCCATGATTCTGCAAGCAAAGAATGTAAGATGAGACTTGGTGAAGCATATGCATTGAAC
AAAAAGCTGAATGGATTGGTCAGTGACGAAGACTTGAACGAGTTAAGAAGAAAAGCAGAC
AATGAATCTACCACTCTGGATTCTGTTTCCAGGAAGAAAAAACAAAAGTTAATTGACTAA

Peptide Sequence

PEP ID

PGSC0003DMP400049863
PEP Infomation

pacid=37446266 transcript=PGSC0003DMT400073684 locus=PGSC0003DMG400028620 ID=PGSC0003DMT400073684.v4.03 annot-version=v4.03
Sequence

MASGANSLMWFRKGLRLHDNPALEYAAKGSKFLYPVFVIDPHYMEPDPTAFSLGSSKAGL
NRIQFLLESLVDLDLSLKKVGSRLLVLKGDPGEVLIRCLKEWSIGKLCFEYDTEPYYQAL
DEKVKGYVSGTGVEIFSPVSHTLYNPADIIRKNGGSPPLSYQSFLKLAGQPSWATTPLLT
TISSLPPIGNTGSFAVSEVPTVRELGYEDLAEDERTPFKGGESEALKRLRESIANKEWVA
NFEKPKGDPSAFLKPATTVLSPYLKFGCLSSRYFYQCIQDILKCSKKHTSPPVSLLGQLL
WRDFFYTAAFGTPNFNQMKGNRICKQIPWKNDDELLAAWRDSRTGFPWIDAIMVQLRKWG
WIHHLARHSVACFLTRGDLFVHWERGRHVFERLLIDSDWAINNGNWLWLSCSSFFYQYNR
IYSPISFGKKYDSAGNYIRHFLPVLKDMPKEYIYEPWTAPISVQRKAKCIIGIDYPKPVV
SHDSASKECKMRLGEAYALNKKLNGLVSDEDLNELRRKADNESTTLDSVSRKKKQKLID*

Transcript Sequence

Transcript ID

PGSC0003DMT400073684
Transcript Infomation

pacid=37446266 locus=PGSC0003DMG400028620 ID=PGSC0003DMT400073684.v4.03 annot-version=v4.03
Sequence

ATGGCTTCTGGGGCGAACTCTTTGATGTGGTTCAGGAAGGGTTTGAGACTCCATGATAAT
CCAGCTTTAGAGTATGCAGCTAAAGGGTCGAAGTTTCTGTACCCGGTTTTCGTGATTGAT
CCACACTATATGGAGCCTGATCCGACTGCGTTTTCTCTGGGTTCCTCAAAAGCCGGGTTG
AACCGGATACAATTTTTGCTTGAAAGCCTTGTTGATCTCGATTTGAGTCTTAAGAAGGTT
GGTTCACGTTTGTTGGTGCTCAAGGGTGACCCTGGTGAGGTTTTGATTCGCTGCTTGAAG
GAGTGGAGCATAGGGAAACTTTGCTTTGAGTATGACACAGAGCCCTACTATCAAGCTTTA
GATGAGAAAGTCAAGGGCTATGTTTCTGGAACTGGCGTAGAGATTTTCTCTCCTGTGAGC
CATACCCTCTACAATCCTGCCGATATAATACGTAAGAATGGTGGATCCCCACCTCTGAGT
TATCAGTCTTTCCTCAAACTGGCTGGGCAACCATCTTGGGCAACAACTCCTCTTTTAACA
ACCATATCTTCACTTCCTCCTATTGGAAATACTGGAAGTTTTGCAGTCTCAGAAGTTCCA
ACTGTCAGAGAACTTGGTTATGAAGATTTAGCAGAGGACGAAAGGACTCCTTTTAAAGGT
GGAGAATCAGAAGCACTGAAGAGATTGAGAGAATCAATTGCTAACAAGGAATGGGTTGCA
AATTTTGAGAAACCCAAGGGTGATCCATCTGCATTTCTAAAACCAGCAACAACTGTTTTA
TCACCCTACTTAAAGTTTGGATGTCTCTCTTCCAGGTACTTCTACCAGTGCATTCAGGAC
ATTCTGAAATGCTCTAAAAAGCATACTTCTCCACCTGTTTCTCTTCTTGGACAGTTGTTA
TGGCGCGACTTTTTCTACACAGCTGCCTTCGGGACTCCTAACTTTAATCAGATGAAGGGT
AACAGAATATGCAAACAGATACCTTGGAAGAATGATGATGAATTGCTAGCTGCTTGGAGA
GATTCCAGGACAGGGTTTCCTTGGATTGACGCCATAATGGTCCAGCTTCGAAAGTGGGGT
TGGATCCACCATCTTGCTCGACACAGTGTTGCATGCTTTTTAACTCGTGGGGATCTGTTT
GTGCATTGGGAGAGAGGACGTCATGTTTTTGAAAGACTGCTTATTGACTCTGATTGGGCA
ATCAACAATGGAAACTGGTTGTGGCTATCATGCTCTTCATTTTTTTACCAGTATAATCGG
ATTTATTCACCAATCTCATTTGGAAAAAAGTATGATTCTGCCGGGAACTATATCAGGCAT
TTTCTTCCTGTTTTAAAAGATATGCCTAAGGAGTACATATATGAGCCTTGGACTGCTCCC
ATAAGTGTCCAACGTAAAGCAAAATGCATCATCGGCATAGATTATCCCAAACCAGTTGTT
TCCCATGATTCTGCAAGCAAAGAATGTAAGATGAGACTTGGTGAAGCATATGCATTGAAC
AAAAAGCTGAATGGATTGGTCAGTGACGAAGACTTGAACGAGTTAAGAAGAAAAGCAGAC
AATGAATCTACCACTCTGGATTCTGTTTCCAGGAAGAAAAAACAAAAGTTAATTGACTAA