Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400073588
CDS Infomation

pacid=37437940 polypeptide=PGSC0003DMP400049796 locus=PGSC0003DMG401028586 ID=PGSC0003DMT400073588.v4.03 annot-version=v4.03
Sequence

ATGGAGGTGAGAGCTAGAGCCCCAGGGAAAATCATAGTGGCTGGAGAACATGCTGTGGTT
CACGGATCAGCTGCCGTCGCTGCCTCTATCGATCTCTATACTTACGTCTCCCTTCGCTTT
CCTACTCCTGCTGATAATGACGAAACACTAAGCCTCCAGCTTAAGGATGTGTCCTTAGAA
TTTTCCTGGCCAATTGCAAGAATTAAAGAGGCTTTTCCAAACTTGGAAAATCCGATTCCA
CCTTCCTCATGCTCGCTGGAGACTCTTAAATTAATTGCTTCTTTAGTCGATGAGCAGAAC
ATTCCTGAGGCAAATATAGGTCTCGCTGCTGGTGTCACAGCTTTTCTTTGGCTGTTCACC
TCAATCCATGGATGCAAACCAGCTAAAGCAGTTGTCAATTCTGAGCTTCCATTGGGATCA
GGCTTGGGTTCGTCCGCAGCTTTTTGTGTTGCACTCTCCGCAGCCATTCTTGCTTTGTCA
GATTCAGTCACTATGGATTTCAGCCACCAAGGGTGGCAAGTATTTGGAGAGAATGAGCTG
GAATTGGTGAATAAATGGGCTTTCGAAGGCGAGAAAATAATTCATGGGAAGCCATCTGGT
ATTGACAACACAGTGAGCACATATGGAAACATGATCAAGTTTAAGTCAGGCGATTTGACA
CGCCTCAAAACAAACATGCCACTTAAAATGTTGATCACTAACACAAAGGTTGGGAGAAAT
ACAAAGGCATTGGTGGCTAGCGTCTCCGAGAGGACCTTGAGGCATCCGACTGCAATGGCT
TCTGTGTTTACTGCAGTGGATTCTATCAGTAATGAGGTGGCTGCAATTATTCAATCACCT
GTCTCTGATGATCTTGCCATAACTGAGAAAGAAGAAAAACTGGCAGAGTTGATGGAGATG
AACCAAGGATTGCTTCAGTGCATGGGTGTTAGCCATGCTTCCATAGAAACTATTCTTCGA
ACAACTCTAAAGTACAAACTGTCTACCAAGTTAACTGGAGCTGGTGGTGGAGGCTGTGTT
TTGACATTACTACCAACCCTTCTATCAGGAACAGTCGTTGATAAAGTGATAGCTGATTTA
GAAACATGCGGATTCCAATGCCTGCTTGCTGGAATTGGTGGAAATGGCGTAGAATTTTCA
TATAGCGGCATTCCTGATATAGGAGACAACGGAGGCAATTTGTCATGA

Peptide Sequence

PEP ID

PGSC0003DMP400049796
PEP Infomation

pacid=37437940 transcript=PGSC0003DMT400073588 locus=PGSC0003DMG401028586 ID=PGSC0003DMT400073588.v4.03 annot-version=v4.03
Sequence

MEVRARAPGKIIVAGEHAVVHGSAAVAASIDLYTYVSLRFPTPADNDETLSLQLKDVSLE
FSWPIARIKEAFPNLENPIPPSSCSLETLKLIASLVDEQNIPEANIGLAAGVTAFLWLFT
SIHGCKPAKAVVNSELPLGSGLGSSAAFCVALSAAILALSDSVTMDFSHQGWQVFGENEL
ELVNKWAFEGEKIIHGKPSGIDNTVSTYGNMIKFKSGDLTRLKTNMPLKMLITNTKVGRN
TKALVASVSERTLRHPTAMASVFTAVDSISNEVAAIIQSPVSDDLAITEKEEKLAELMEM
NQGLLQCMGVSHASIETILRTTLKYKLSTKLTGAGGGGCVLTLLPTLLSGTVVDKVIADL
ETCGFQCLLAGIGGNGVEFSYSGIPDIGDNGGNLS*

Transcript Sequence

Transcript ID

PGSC0003DMT400073588
Transcript Infomation

pacid=37437940 locus=PGSC0003DMG401028586 ID=PGSC0003DMT400073588.v4.03 annot-version=v4.03
Sequence

ATGGAGGTGAGAGCTAGAGCCCCAGGGAAAATCATAGTGGCTGGAGAACATGCTGTGGTT
CACGGATCAGCTGCCGTCGCTGCCTCTATCGATCTCTATACTTACGTCTCCCTTCGCTTT
CCTACTCCTGCTGATAATGACGAAACACTAAGCCTCCAGCTTAAGGATGTGTCCTTAGAA
TTTTCCTGGCCAATTGCAAGAATTAAAGAGGCTTTTCCAAACTTGGAAAATCCGATTCCA
CCTTCCTCATGCTCGCTGGAGACTCTTAAATTAATTGCTTCTTTAGTCGATGAGCAGAAC
ATTCCTGAGGCAAATATAGGTCTCGCTGCTGGTGTCACAGCTTTTCTTTGGCTGTTCACC
TCAATCCATGGATGCAAACCAGCTAAAGCAGTTGTCAATTCTGAGCTTCCATTGGGATCA
GGCTTGGGTTCGTCCGCAGCTTTTTGTGTTGCACTCTCCGCAGCCATTCTTGCTTTGTCA
GATTCAGTCACTATGGATTTCAGCCACCAAGGGTGGCAAGTATTTGGAGAGAATGAGCTG
GAATTGGTGAATAAATGGGCTTTCGAAGGCGAGAAAATAATTCATGGGAAGCCATCTGGT
ATTGACAACACAGTGAGCACATATGGAAACATGATCAAGTTTAAGTCAGGCGATTTGACA
CGCCTCAAAACAAACATGCCACTTAAAATGTTGATCACTAACACAAAGGTTGGGAGAAAT
ACAAAGGCATTGGTGGCTAGCGTCTCCGAGAGGACCTTGAGGCATCCGACTGCAATGGCT
TCTGTGTTTACTGCAGTGGATTCTATCAGTAATGAGGTGGCTGCAATTATTCAATCACCT
GTCTCTGATGATCTTGCCATAACTGAGAAAGAAGAAAAACTGGCAGAGTTGATGGAGATG
AACCAAGGATTGCTTCAGTGCATGGGTGTTAGCCATGCTTCCATAGAAACTATTCTTCGA
ACAACTCTAAAGTACAAACTGTCTACCAAGTTAACTGGAGCTGGTGGTGGAGGCTGTGTT
TTGACATTACTACCAACCCTTCTATCAGGAACAGTCGTTGATAAAGTGATAGCTGATTTA
GAAACATGCGGATTCCAATGCCTGCTTGCTGGAATTGGTGGAAATGGCGTAGAATTTTCA
TATAGCGGCATTCCTGATATAGGAGACAACGGAGGCAATTTGTCATGA