Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400073484
CDS Infomation

pacid=37453589 polypeptide=PGSC0003DMP400049725 locus=PGSC0003DMG400028546 ID=PGSC0003DMT400073484.v4.03 annot-version=v4.03
Sequence

ATGTACACTTACATGTACAAATTTGCTAAAGGGAGACAAGAATTGGGACAGAGTCTTTAC
TTGGCGTGGGCTGGATGGGTTTGTGTATGGACAGCACTCTTGTTGGTTCTTCTAGCAATA
TTTAACGCGTGCTACATTATTAATCGATTTACAAGGATAGCTGGGGAGACATTTGGGATG
CTCATTTCTCTGCTTTTTATTCAAGAGGCAATTAAGGTAACTGCAGGCTGGTTCAGAAGC
TTTGTTGCTGATTATGGTGTTCCTTTAATGGTTCTTGTGTGGTCAGCACTCTCATATGGA
GTGCCAAGTGAAGTTCCATCTGGAGTTCCCAGAAGGCTCTTTAGTCCACTTCCTTGGGAA
TCTGCATCTTCACATCACTGGACTGTAATCAAGGATATGGGGAAGGTTCCTCCGACATAC
ATCGTTGCTGCCTTAATTCCAGCTCTAATGATTGCTGGACTTTATTTCTTTGATCACACT
GTTGCTTCACAGATGGCACAACAAAGTGAATTCAATCTTAAGAATCCTTCTGCTTATCAT
CATGACATCTTGCTCTTGGGATTTATGACTTTGCTTTGTGGTTTGATTGGTGTGCCTCCT
TCAAATGGCGTCCTGCCTCAGTCACCTATGCATACGAAGAGCTTGGCTGTTCTCAAGAGA
CAGCTGATTCGGAGGAAGATGGTTAAAAGTGCCAAGGAGAGTATAAAGCGAAAGGCTAGC
AACTCTGAAATCTATGGAAATATGCAAGCAGTTCTCATAGAGATTGATAGTTCTTCTGAT
ACCACAGTAGCTAAAGAGTTGGAACACCTAAAAGAGGCAGTAATGAAAAGTACTGAAAAC
AAAAATGGAGGTACAACAGAGGTCACATTTGATCCAGAGAAACACATAGATGTTTACTTG
CCTGTCCGAGTGAATGAACAAAGAGTGAGCAATCTATTACAGTCGCTACTAGTAGCAGCA
TCAGTTTTTGCTATGCCAGTGATAAAGAAGATACCAACTTCAGTTCTTTGGGGATATTTT
GCTTATATGGCTATTGACAGCCTGCCTGGAAATCAACTTTGGGAAAGATTATTGCTTCTT
TTCATCACCACTGGAAGGAGATTCAAGGTACTTGAAGGGGTGCATGCATCTTTTGTGGAG
TCAGTGCCATTCAGATACATTGCAATTTTCACAATTTTCCAGTTTGTATACTTATTGTTG
TGCTTTGGAGTCACATGGATCCCCATAGTTGGAATTCTCTTCCCCTTGCCATTTTTTCTT
CTCTTAAGCATAAGACAACATATACTCCCCAAGCTGTTCCAGCCTCATCATTTGAGAGAG
CTAGATGCAGCTGAGTATGAGGAAATTGTTGGTGCCTCTCAACGTTTACGCAGCTTCTCT
TCTAAGGAAAAGGAAGTACCTACTAATGGAACTCATGAGGAAGGTGAAGTAGACATTTGT
AATGCTGAGATACTAGACGAACTTACAACCAGTAGAGGGGAATTTAAGGTCAGGAGCAAG
AGCTTTAGCGAGGATAAACGTCCGCAGAAAGTCACTTTCTTTGTTGTAAAAGATTGGAAT
TAA

Peptide Sequence

PEP ID

PGSC0003DMP400049725
PEP Infomation

pacid=37453589 transcript=PGSC0003DMT400073484 locus=PGSC0003DMG400028546 ID=PGSC0003DMT400073484.v4.03 annot-version=v4.03
Sequence

MYTYMYKFAKGRQELGQSLYLAWAGWVCVWTALLLVLLAIFNACYIINRFTRIAGETFGM
LISLLFIQEAIKVTAGWFRSFVADYGVPLMVLVWSALSYGVPSEVPSGVPRRLFSPLPWE
SASSHHWTVIKDMGKVPPTYIVAALIPALMIAGLYFFDHTVASQMAQQSEFNLKNPSAYH
HDILLLGFMTLLCGLIGVPPSNGVLPQSPMHTKSLAVLKRQLIRRKMVKSAKESIKRKAS
NSEIYGNMQAVLIEIDSSSDTTVAKELEHLKEAVMKSTENKNGGTTEVTFDPEKHIDVYL
PVRVNEQRVSNLLQSLLVAASVFAMPVIKKIPTSVLWGYFAYMAIDSLPGNQLWERLLLL
FITTGRRFKVLEGVHASFVESVPFRYIAIFTIFQFVYLLLCFGVTWIPIVGILFPLPFFL
LLSIRQHILPKLFQPHHLRELDAAEYEEIVGASQRLRSFSSKEKEVPTNGTHEEGEVDIC
NAEILDELTTSRGEFKVRSKSFSEDKRPQKVTFFVVKDWN*

Transcript Sequence

Transcript ID

PGSC0003DMT400073484
Transcript Infomation

pacid=37453589 locus=PGSC0003DMG400028546 ID=PGSC0003DMT400073484.v4.03 annot-version=v4.03
Sequence

ATGTACACTTACATGTACAAATTTGCTAAAGGGAGACAAGAATTGGGACAGAGTCTTTAC
TTGGCGTGGGCTGGATGGGTTTGTGTATGGACAGCACTCTTGTTGGTTCTTCTAGCAATA
TTTAACGCGTGCTACATTATTAATCGATTTACAAGGATAGCTGGGGAGACATTTGGGATG
CTCATTTCTCTGCTTTTTATTCAAGAGGCAATTAAGGTAACTGCAGGCTGGTTCAGAAGC
TTTGTTGCTGATTATGGTGTTCCTTTAATGGTTCTTGTGTGGTCAGCACTCTCATATGGA
GTGCCAAGTGAAGTTCCATCTGGAGTTCCCAGAAGGCTCTTTAGTCCACTTCCTTGGGAA
TCTGCATCTTCACATCACTGGACTGTAATCAAGGATATGGGGAAGGTTCCTCCGACATAC
ATCGTTGCTGCCTTAATTCCAGCTCTAATGATTGCTGGACTTTATTTCTTTGATCACACT
GTTGCTTCACAGATGGCACAACAAAGTGAATTCAATCTTAAGAATCCTTCTGCTTATCAT
CATGACATCTTGCTCTTGGGATTTATGACTTTGCTTTGTGGTTTGATTGGTGTGCCTCCT
TCAAATGGCGTCCTGCCTCAGTCACCTATGCATACGAAGAGCTTGGCTGTTCTCAAGAGA
CAGCTGATTCGGAGGAAGATGGTTAAAAGTGCCAAGGAGAGTATAAAGCGAAAGGCTAGC
AACTCTGAAATCTATGGAAATATGCAAGCAGTTCTCATAGAGATTGATAGTTCTTCTGAT
ACCACAGTAGCTAAAGAGTTGGAACACCTAAAAGAGGCAGTAATGAAAAGTACTGAAAAC
AAAAATGGAGGTACAACAGAGGTCACATTTGATCCAGAGAAACACATAGATGTTTACTTG
CCTGTCCGAGTGAATGAACAAAGAGTGAGCAATCTATTACAGTCGCTACTAGTAGCAGCA
TCAGTTTTTGCTATGCCAGTGATAAAGAAGATACCAACTTCAGTTCTTTGGGGATATTTT
GCTTATATGGCTATTGACAGCCTGCCTGGAAATCAACTTTGGGAAAGATTATTGCTTCTT
TTCATCACCACTGGAAGGAGATTCAAGGTACTTGAAGGGGTGCATGCATCTTTTGTGGAG
TCAGTGCCATTCAGATACATTGCAATTTTCACAATTTTCCAGTTTGTATACTTATTGTTG
TGCTTTGGAGTCACATGGATCCCCATAGTTGGAATTCTCTTCCCCTTGCCATTTTTTCTT
CTCTTAAGCATAAGACAACATATACTCCCCAAGCTGTTCCAGCCTCATCATTTGAGAGAG
CTAGATGCAGCTGAGTATGAGGAAATTGTTGGTGCCTCTCAACGTTTACGCAGCTTCTCT
TCTAAGGAAAAGGAAGTACCTACTAATGGAACTCATGAGGAAGGTGAAGTAGACATTTGT
AATGCTGAGATACTAGACGAACTTACAACCAGTAGAGGGGAATTTAAGGTCAGGAGCAAG
AGCTTTAGCGAGGATAAACGTCCGCAGAAAGTCACTTTCTTTGTTGTAAAAGATTGGAAT
TAA