Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400073469
CDS Infomation

pacid=37451052 polypeptide=PGSC0003DMP400049712 locus=PGSC0003DMG400028539 ID=PGSC0003DMT400073469.v4.03 annot-version=v4.03
Sequence

ATGGCTCAGATTCAGCTTCATGGAACTCTACATGTCACGATCTTTGAGGTCGATAATCTG
CAGGGTGAGGAGGGGGGTGGGCATTTCTTTAGCAAGATAAAGCAACATTTTGAGGAGACA
GTTGGTGTTGGAAAAGGAACTCCAAAACTTTATGCTACAATTGATTTGGAGAAGGCTAGG
GTTGGGAGAACAAGAATGATTGAAAATGAACCAAAAAATCCAAGGTGGTACGAGTCTTTT
CACATTTACTGTGCACATATGGCTTCAAATGTTATATTCACTATCAAAGATGACAATCCC
TTTGGTGCATCCTTAATTGGAAGAGCTTATGTTCCAGTTGAAGAACTTTTGGAAGGGGAG
GAGATTGATAAATGGGTTGAGATACTGGATAAAGAAATGAATCCTATAGCAGAAGGTTCT
AAAATCCACGTTAAGCTACAGTTTTTTGACGTCAGTCGAGATCCAAACTGGGGACGTGGA
ATTAGAAGCTCTAGATATCCTGGTGTCCCTTACACTTTCTTTTCACAGAGAGCGGGATCG
CGGGTTTCCTTGTATCAAGATGCTCATGTGCCAGACAATTTTATTCCTAAAATCCCTCTC
TCTGGAGGAAAGTATTATGAGCCCCACAGATGTTGGGAAGATATCTTTGATGCTATTACT
AATGCAAAGCACCTGATTTACATTACTGGCTGGTCAGTATATACTGAAATAACCTTGGTG
AGGGACTCGAGGAGACAAAAACCTGGAGGAGACATCACGTTGGGGGAGCTGCTCAAGAAG
AAGGCAAGTGAAGGTGTTAAAGTTCTTATGCTTGTTTGGGATGATAGGACGTCCGTGGGT
TTGCTGAAGAAGGATGGTCTGATGGCCACTCATGACCAAGAAACTGAACAGTTCTTTCAA
GGTACTGATGTACACTGTGTCCTCTGCCCTCGGAATCCTGATAATGGTGGAAGCTTTGTC
CAAGATATACAAATCTCTACCATGTTTACCCATCACCAGAAAATCATAGTAGTGGACAGT
GCACTTCCCAGCGGAGAGTCAGAAAAGAGGAGAATTTTGAGTTTTGTGGGAGGTATTGAT
CTTTGCGATGGGAGATATGATACACCTTTCCATTCGCTTTTTAGGACATTGGACACTGCA
CATCATGATGATTTCCACCAACCCAATTTTGCTGATGGCTCAATTACCAAAGGTGGACCA
AGGGAGCCCTGGCATGACATTCACTCTCGGCTTGAAGGCCCAATTGCTTGGGACGTTCTG
TTTAATTTTGAGCAGAGATGGAGAAAGCAGGGAGGAAAGGATATTCTTGTCAACTTTAGA
GAGCTTGATGATATTATAATTCCACCATCCCCGGTGATGTACCCTGATGATCATGAAACA
TGGAATGTTCAGTTATTCAGATCAATTGATGGGGGGGCTGCTTTTGGCTTTCCTGACACA
CCTGAAGATGCAGCAAAAGCTGGCCTTGTCAGTGGGAAGGATAACATAATTGATAGAAGC
ATCCAAGATGCTTATATTCATGCTATTCGTCGAGCAAAAAAATTTATTTACATTGAAAAT
CAGTATTTTCTTGGAAGCTGTGCCGACTGGCAGTGTGATGATATCAAGGTAGAGGACGTA
GGTGCTTTGCATGTCATTCCAAAGGAACTTGCATTGAAGATTGTCAGTAAGATTGAAGCC
GGGGAAAGGTTTACTGTTTATGTTGTGGTCCCAATGTGGCCAGAAGGAATCCCCGAAAGT
GCATCAGTACAGGCAATATTAGACTGGCAGAGGAGGACAATGGAGATGATGTATAAGTAC
ATTGTTCAAGCAATGAATGCTAAAGGTATCGAGGAAGATCCAAGGAATTATTTGACATTT
TTCTGCATTGGTAACCGAGAGGTGAAGAAGAGTGGAGAATATGAACCTTCTGAGAGCCCA
GAGCCTGATTCTAATTACATGCGAGCTCAGGAGGCACGACGTTTCATGATATATGTCCAT
TCCAAGATGATGATTGTGGATGATGAGTACATCATAGTTGGATCGGCCAATATAAACCAG
AGATCTATGGATGGTGCTAGAGATTCTGAAATAGCCATGGGAGCCTACCAGCCTTATCAT
TTGGTCACCAGTGAACCAGCTAGGGGTCAAGTTCATGGTTTCAGAATGGCATTGTGGTAC
GAGCACCTTGGTATGCTCGATGAGACCTTCCAACATCCAGAAAGTGAGGAATGTGTGAGG
AAGGTGAATCAAATAGCTGATAAATACTGGGATATGTATTCAAGTGAGAGTCTGGAAAGA
GATCTGCCTGGTCACTTGCTCCGCTACCCTATTGGAGTGGCTAGCGAAGGGGATATCACG
GAGCTACCAGGCCATGAATTTTTCCCAGATACCAAGGCCAGGGTTCTTGGTACTAAATCT
GACTACCTTCCTCCTAACCTCACTACATAA

Peptide Sequence

PEP ID

PGSC0003DMP400049712
PEP Infomation

pacid=37451052 transcript=PGSC0003DMT400073469 locus=PGSC0003DMG400028539 ID=PGSC0003DMT400073469.v4.03 annot-version=v4.03
Sequence

MAQIQLHGTLHVTIFEVDNLQGEEGGGHFFSKIKQHFEETVGVGKGTPKLYATIDLEKAR
VGRTRMIENEPKNPRWYESFHIYCAHMASNVIFTIKDDNPFGASLIGRAYVPVEELLEGE
EIDKWVEILDKEMNPIAEGSKIHVKLQFFDVSRDPNWGRGIRSSRYPGVPYTFFSQRAGS
RVSLYQDAHVPDNFIPKIPLSGGKYYEPHRCWEDIFDAITNAKHLIYITGWSVYTEITLV
RDSRRQKPGGDITLGELLKKKASEGVKVLMLVWDDRTSVGLLKKDGLMATHDQETEQFFQ
GTDVHCVLCPRNPDNGGSFVQDIQISTMFTHHQKIIVVDSALPSGESEKRRILSFVGGID
LCDGRYDTPFHSLFRTLDTAHHDDFHQPNFADGSITKGGPREPWHDIHSRLEGPIAWDVL
FNFEQRWRKQGGKDILVNFRELDDIIIPPSPVMYPDDHETWNVQLFRSIDGGAAFGFPDT
PEDAAKAGLVSGKDNIIDRSIQDAYIHAIRRAKKFIYIENQYFLGSCADWQCDDIKVEDV
GALHVIPKELALKIVSKIEAGERFTVYVVVPMWPEGIPESASVQAILDWQRRTMEMMYKY
IVQAMNAKGIEEDPRNYLTFFCIGNREVKKSGEYEPSESPEPDSNYMRAQEARRFMIYVH
SKMMIVDDEYIIVGSANINQRSMDGARDSEIAMGAYQPYHLVTSEPARGQVHGFRMALWY
EHLGMLDETFQHPESEECVRKVNQIADKYWDMYSSESLERDLPGHLLRYPIGVASEGDIT
ELPGHEFFPDTKARVLGTKSDYLPPNLTT*

Transcript Sequence

Transcript ID

PGSC0003DMT400073469
Transcript Infomation

pacid=37451052 locus=PGSC0003DMG400028539 ID=PGSC0003DMT400073469.v4.03 annot-version=v4.03
Sequence

ATGGCTCAGATTCAGCTTCATGGAACTCTACATGTCACGATCTTTGAGGTCGATAATCTG
CAGGGTGAGGAGGGGGGTGGGCATTTCTTTAGCAAGATAAAGCAACATTTTGAGGAGACA
GTTGGTGTTGGAAAAGGAACTCCAAAACTTTATGCTACAATTGATTTGGAGAAGGCTAGG
GTTGGGAGAACAAGAATGATTGAAAATGAACCAAAAAATCCAAGGTGGTACGAGTCTTTT
CACATTTACTGTGCACATATGGCTTCAAATGTTATATTCACTATCAAAGATGACAATCCC
TTTGGTGCATCCTTAATTGGAAGAGCTTATGTTCCAGTTGAAGAACTTTTGGAAGGGGAG
GAGATTGATAAATGGGTTGAGATACTGGATAAAGAAATGAATCCTATAGCAGAAGGTTCT
AAAATCCACGTTAAGCTACAGTTTTTTGACGTCAGTCGAGATCCAAACTGGGGACGTGGA
ATTAGAAGCTCTAGATATCCTGGTGTCCCTTACACTTTCTTTTCACAGAGAGCGGGATCG
CGGGTTTCCTTGTATCAAGATGCTCATGTGCCAGACAATTTTATTCCTAAAATCCCTCTC
TCTGGAGGAAAGTATTATGAGCCCCACAGATGTTGGGAAGATATCTTTGATGCTATTACT
AATGCAAAGCACCTGATTTACATTACTGGCTGGTCAGTATATACTGAAATAACCTTGGTG
AGGGACTCGAGGAGACAAAAACCTGGAGGAGACATCACGTTGGGGGAGCTGCTCAAGAAG
AAGGCAAGTGAAGGTGTTAAAGTTCTTATGCTTGTTTGGGATGATAGGACGTCCGTGGGT
TTGCTGAAGAAGGATGGTCTGATGGCCACTCATGACCAAGAAACTGAACAGTTCTTTCAA
GGTACTGATGTACACTGTGTCCTCTGCCCTCGGAATCCTGATAATGGTGGAAGCTTTGTC
CAAGATATACAAATCTCTACCATGTTTACCCATCACCAGAAAATCATAGTAGTGGACAGT
GCACTTCCCAGCGGAGAGTCAGAAAAGAGGAGAATTTTGAGTTTTGTGGGAGGTATTGAT
CTTTGCGATGGGAGATATGATACACCTTTCCATTCGCTTTTTAGGACATTGGACACTGCA
CATCATGATGATTTCCACCAACCCAATTTTGCTGATGGCTCAATTACCAAAGGTGGACCA
AGGGAGCCCTGGCATGACATTCACTCTCGGCTTGAAGGCCCAATTGCTTGGGACGTTCTG
TTTAATTTTGAGCAGAGATGGAGAAAGCAGGGAGGAAAGGATATTCTTGTCAACTTTAGA
GAGCTTGATGATATTATAATTCCACCATCCCCGGTGATGTACCCTGATGATCATGAAACA
TGGAATGTTCAGTTATTCAGATCAATTGATGGGGGGGCTGCTTTTGGCTTTCCTGACACA
CCTGAAGATGCAGCAAAAGCTGGCCTTGTCAGTGGGAAGGATAACATAATTGATAGAAGC
ATCCAAGATGCTTATATTCATGCTATTCGTCGAGCAAAAAAATTTATTTACATTGAAAAT
CAGTATTTTCTTGGAAGCTGTGCCGACTGGCAGTGTGATGATATCAAGGTAGAGGACGTA
GGTGCTTTGCATGTCATTCCAAAGGAACTTGCATTGAAGATTGTCAGTAAGATTGAAGCC
GGGGAAAGGTTTACTGTTTATGTTGTGGTCCCAATGTGGCCAGAAGGAATCCCCGAAAGT
GCATCAGTACAGGCAATATTAGACTGGCAGAGGAGGACAATGGAGATGATGTATAAGTAC
ATTGTTCAAGCAATGAATGCTAAAGGTATCGAGGAAGATCCAAGGAATTATTTGACATTT
TTCTGCATTGGTAACCGAGAGGTGAAGAAGAGTGGAGAATATGAACCTTCTGAGAGCCCA
GAGCCTGATTCTAATTACATGCGAGCTCAGGAGGCACGACGTTTCATGATATATGTCCAT
TCCAAGATGATGATTGTGGATGATGAGTACATCATAGTTGGATCGGCCAATATAAACCAG
AGATCTATGGATGGTGCTAGAGATTCTGAAATAGCCATGGGAGCCTACCAGCCTTATCAT
TTGGTCACCAGTGAACCAGCTAGGGGTCAAGTTCATGGTTTCAGAATGGCATTGTGGTAC
GAGCACCTTGGTATGCTCGATGAGACCTTCCAACATCCAGAAAGTGAGGAATGTGTGAGG
AAGGTGAATCAAATAGCTGATAAATACTGGGATATGTATTCAAGTGAGAGTCTGGAAAGA
GATCTGCCTGGTCACTTGCTCCGCTACCCTATTGGAGTGGCTAGCGAAGGGGATATCACG
GAGCTACCAGGCCATGAATTTTTCCCAGATACCAAGGCCAGGGTTCTTGGTACTAAATCT
GACTACCTTCCTCCTAACCTCACTACATAA