Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400073314
CDS Infomation

pacid=37451421 polypeptide=PGSC0003DMP400049593 locus=PGSC0003DMG402028489 ID=PGSC0003DMT400073314.v4.03 annot-version=v4.03
Sequence

ATGGCCGTACTAACCACAGCCTTACAGTTACAGTCACTCCCTTCTTCCTTCCCTCTTCCT
CGCTCTCCCTTTATCTCTTTTTCCTTTTCCCTTTCCCCCATTTGCCCACTGCCCCACTCT
CCCAAAACCTCCGGAAGATCATCACTACTCTCCTTGAAGGGAATTCAGTGCATCAAGAAT
GAAGTGGGAGCTGACCCAAAAAAAGGCGTCAGTGTTTACAAGCCTAAATCATACCAAGTC
CTTGTTTCTGATGCCGCAAATTCTCTTTTTTATGCCCTAAATGACGGAAAGACCAGACTC
GAAATTGACTTCCCGCCCTTGCCCACCAGCATTTCTTCTTATAAGGGGTCTTCGGATGAG
TTCAGTGATGCCAATATCCAACTTGTACTAGCTGTTGTTAAGAAGCTTCAGGAAAAGATG
GAAACTAGAGCTTGTGTGGTGTTTCCTGACAAACCAGAAAAGCGTAGGGCCAGCGATCTT
TTCAAAGCAGCTCTTGACTCGATAGATGGCATTACCATTGGATCCTTGGATGATATTCCT
GGGGGCGCTGTGACCTCATTCTTCAGATCTATAAGGAATACACTGGACTTCGATTTTGAG
GATGAGAATGAAGGTCGTTGGAAGTCTGACCAGCCTCCTACACTATATATATTTATCAAC
TGCAGCACTCGTGACCTTTCGTACATTGAGAAGTATGTGGGTAAATTTGCTACGTCAACC
CCGAGTCTCCTTTTCAATCTCGAACTTGACACCTTGCGTGCTGACCTGGGTATTATAGGC
TTTCCACCAAGGGAATTGCATTATCAATTTCTTTCTCAATTCACCCCCGTCTTTTATATT
CGAACAAGAGAGTACTCAAAGACAGTTGCAGTGGAACCTTATATAGTGAACTACAATGGA
GCTCTCTTCCGTCAATATCCTGGGCCTTGGCAGGTGATGCTGAAACAGACAGATGGTTCT
TTTGTTTGTGTGGCAGAAAGTGCAACTCGCTTCACTCTTAACGAAACCAAGGAAGAACTA
TTGAGAGTCCTCGGACTGCAAGAAGAGAAAGGAAGCTCACTTGAATTTCTCAGAAGAGGA
TACAAGACTGCAACCTGGTGGGAGGAAGATGTTGATTTAGAAGCATCCTCTGCATGGCGT
AGTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400049593
PEP Infomation

pacid=37451421 transcript=PGSC0003DMT400073314 locus=PGSC0003DMG402028489 ID=PGSC0003DMT400073314.v4.03 annot-version=v4.03
Sequence

MAVLTTALQLQSLPSSFPLPRSPFISFSFSLSPICPLPHSPKTSGRSSLLSLKGIQCIKN
EVGADPKKGVSVYKPKSYQVLVSDAANSLFYALNDGKTRLEIDFPPLPTSISSYKGSSDE
FSDANIQLVLAVVKKLQEKMETRACVVFPDKPEKRRASDLFKAALDSIDGITIGSLDDIP
GGAVTSFFRSIRNTLDFDFEDENEGRWKSDQPPTLYIFINCSTRDLSYIEKYVGKFATST
PSLLFNLELDTLRADLGIIGFPPRELHYQFLSQFTPVFYIRTREYSKTVAVEPYIVNYNG
ALFRQYPGPWQVMLKQTDGSFVCVAESATRFTLNETKEELLRVLGLQEEKGSSLEFLRRG
YKTATWWEEDVDLEASSAWRS*

Transcript Sequence

Transcript ID

PGSC0003DMT400073314
Transcript Infomation

pacid=37451421 locus=PGSC0003DMG402028489 ID=PGSC0003DMT400073314.v4.03 annot-version=v4.03
Sequence

ATGGCCGTACTAACCACAGCCTTACAGTTACAGTCACTCCCTTCTTCCTTCCCTCTTCCT
CGCTCTCCCTTTATCTCTTTTTCCTTTTCCCTTTCCCCCATTTGCCCACTGCCCCACTCT
CCCAAAACCTCCGGAAGATCATCACTACTCTCCTTGAAGGGAATTCAGTGCATCAAGAAT
GAAGTGGGAGCTGACCCAAAAAAAGGCGTCAGTGTTTACAAGCCTAAATCATACCAAGTC
CTTGTTTCTGATGCCGCAAATTCTCTTTTTTATGCCCTAAATGACGGAAAGACCAGACTC
GAAATTGACTTCCCGCCCTTGCCCACCAGCATTTCTTCTTATAAGGGGTCTTCGGATGAG
TTCAGTGATGCCAATATCCAACTTGTACTAGCTGTTGTTAAGAAGCTTCAGGAAAAGATG
GAAACTAGAGCTTGTGTGGTGTTTCCTGACAAACCAGAAAAGCGTAGGGCCAGCGATCTT
TTCAAAGCAGCTCTTGACTCGATAGATGGCATTACCATTGGATCCTTGGATGATATTCCT
GGGGGCGCTGTGACCTCATTCTTCAGATCTATAAGGAATACACTGGACTTCGATTTTGAG
GATGAGAATGAAGGTCGTTGGAAGTCTGACCAGCCTCCTACACTATATATATTTATCAAC
TGCAGCACTCGTGACCTTTCGTACATTGAGAAGTATGTGGGTAAATTTGCTACGTCAACC
CCGAGTCTCCTTTTCAATCTCGAACTTGACACCTTGCGTGCTGACCTGGGTATTATAGGC
TTTCCACCAAGGGAATTGCATTATCAATTTCTTTCTCAATTCACCCCCGTCTTTTATATT
CGAACAAGAGAGTACTCAAAGACAGTTGCAGTGGAACCTTATATAGTGAACTACAATGGA
GCTCTCTTCCGTCAATATCCTGGGCCTTGGCAGGTGATGCTGAAACAGACAGATGGTTCT
TTTGTTTGTGTGGCAGAAAGTGCAACTCGCTTCACTCTTAACGAAACCAAGGAAGAACTA
TTGAGAGTCCTCGGACTGCAAGAAGAGAAAGGAAGCTCACTTGAATTTCTCAGAAGAGGA
TACAAGACTGCAACCTGGTGGGAGGAAGATGTTGATTTAGAAGCATCCTCTGCATGGCGT
AGTTGA