Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400073289
CDS Infomation

pacid=37427661 polypeptide=PGSC0003DMP400049573 locus=PGSC0003DMG400028478 ID=PGSC0003DMT400073289.v4.03 annot-version=v4.03
Sequence

ATGAAAATCTTGTTCACACTCTTCATCTTTCTTTCTCTTTTCACATTCTCAAAATCAGAA
TCCCCTTGCAAAAACAACACAGATTTAGATTTATATCTTGTTTCCAAGGCTTTCAGTTCT
GTTTATGGTTTCAACATCTCTTGGTTCAACTCAAACTGTTCTTCTCCAATAACTGAAATA
AACTTATCTTCAAGAAACCTCACTGGCATAGTTTCATGGAAGTACTTAACAAATTTGTCT
CATCTTCATACTATAGATCTATCAAATAATTCCTTAAAGGGTTCTGTTCATCCTCTGTTT
TGGTCCATTTCATCTTTGGTTCAAGTCAATTTGTCAAAGAATAAGCTAGGTGGGGCTGTT
GCTGTAGCAAGATCATCATCATCTATTCAAAGACTTGATCTTTCTTTCAACAGGTTTACC
AACTTAGGCTCTGTATTTTATGGTTTTCCTAATCTTACTTCTCTTGACCTTTCACATAAT
GATATCAAGTCTTTACCTTTTTGGTTTACCAACCTAACTAAGCTTGAAAATTTGAGCATT
TCTAGCTGTAACATTTATGGTAATCCAGAACCCCTTTCACATATCAAGTCACTGAAGCAT
TTAGATGTTTCTGTCAACCATATGGATGGTAAATTTCCTAATGATTTTCCTCCTCTGTCT
AGTCTCAATTTCTTGAATATCTCATTCAATAACTTCACTGGGGAAATACCCAAAGACCAG
TTTGCTAAATTTGGGAACTCTTCTTTCATTCATGCTGGGCACTTGCAAATCAAGAATCTC
TTACCAAATCCCAAGAATTCCTCACAGTTACACATTAAAAATCATAACTTTACTACCCCA
ACACACAAAAAAATGTTGCCTTCGAGACACAAACCTATCAAACCAAACACACACAAGAAA
AGGCCCAAATCAAGAAAGAAAGTTTTAACCATAGCTATTTCCTCTGCTTCAGCATTTCTA
ATCTTGGCCATGGGGTTAGTCATTTTGTGTCTATACAAGAGGAGAAAAACATTGGCTAGG
AAGAACAAATGGCTAATTTCAAAGCCAATACAAATACCATTTAGAATGGACAAATCAGGG
CCATTTTCATTTGAAACAGAGTCAGGGAATTCATGGGTTGCTGACATAAAAGAACCAAGT
TCAGCAGCTGTAGTTATGTTTGAGAAGCCATTGATGAACCTAACATTCAAAGACCTCATA
GCAGCCACAACTCACTTTGGAAAAGAGTCATTGTTAGCTGAAGGAAGGTGTGGGCCCGTT
TACAGAGCCGTACTTCCAGGTGACCTCCACGTGGCAATCAAGGTCTTGGAACATGCTAGG
GAACTAGCCCATGATGATGCTATTATCTTGTTTGAACAACTCTCCAGGCTTAAGCATCCT
AATCTGTTGCCTATTTCTGGTTACTGCATTGCAGGGAAAGAGAAGCTAGTCTTATACGAA
TTCATATCCAATGGTGACCTCCACCGATGGCTACACGAGCTTCCAACTGCTACCACCAAC
GTGGAAGATTGGACAACCGACACGTGGGAGTTACAAAACGGTTCTCAAATTACGTCACCC
GGGAAAATGGAATGGCACACGCGCCACCGTATTGCCGTTGGCGTAGCGCGTGGACTAGCC
TACCTCCACCACGCGCAGTCGAAACCTGTGGTCCACGGTCATTTGGTGCTATCTAATGTC
TTACTAGCCGATGACTTTGAGCCTCGGATAGCCGATTTTGGATTGAGCCAAAACCAAGCC
GAGGGATCTAGTGAGACGGATGTGTACGATTTTGGAGTCGTATTAGTAGAGCTATTAACA
GGGAAAATCGGCTCGGATGAGACGATTAAATGGGTGAGGAGGCTAGTGAAGGATGGACTT
GGAGCTGACGCGCTTGATTCGAGACTAAGACTCGGTGGTGACTCAGTGAGTGAGATGGTG
GAGTGCCTCCGAGTTGGGTACTTGTGTACGGCGGAGACCCCAAATAAACGGCCTAGAATG
CAACAAGTTTTAGGTTTGCTAAAAGACATACAGCCCCACTACCAACTCGGGAAAACGCAA
AATTTATAA

Peptide Sequence

PEP ID

PGSC0003DMP400049573
PEP Infomation

pacid=37427661 transcript=PGSC0003DMT400073289 locus=PGSC0003DMG400028478 ID=PGSC0003DMT400073289.v4.03 annot-version=v4.03
Sequence

MKILFTLFIFLSLFTFSKSESPCKNNTDLDLYLVSKAFSSVYGFNISWFNSNCSSPITEI
NLSSRNLTGIVSWKYLTNLSHLHTIDLSNNSLKGSVHPLFWSISSLVQVNLSKNKLGGAV
AVARSSSSIQRLDLSFNRFTNLGSVFYGFPNLTSLDLSHNDIKSLPFWFTNLTKLENLSI
SSCNIYGNPEPLSHIKSLKHLDVSVNHMDGKFPNDFPPLSSLNFLNISFNNFTGEIPKDQ
FAKFGNSSFIHAGHLQIKNLLPNPKNSSQLHIKNHNFTTPTHKKMLPSRHKPIKPNTHKK
RPKSRKKVLTIAISSASAFLILAMGLVILCLYKRRKTLARKNKWLISKPIQIPFRMDKSG
PFSFETESGNSWVADIKEPSSAAVVMFEKPLMNLTFKDLIAATTHFGKESLLAEGRCGPV
YRAVLPGDLHVAIKVLEHARELAHDDAIILFEQLSRLKHPNLLPISGYCIAGKEKLVLYE
FISNGDLHRWLHELPTATTNVEDWTTDTWELQNGSQITSPGKMEWHTRHRIAVGVARGLA
YLHHAQSKPVVHGHLVLSNVLLADDFEPRIADFGLSQNQAEGSSETDVYDFGVVLVELLT
GKIGSDETIKWVRRLVKDGLGADALDSRLRLGGDSVSEMVECLRVGYLCTAETPNKRPRM
QQVLGLLKDIQPHYQLGKTQNL*

Transcript Sequence

Transcript ID

PGSC0003DMT400073289
Transcript Infomation

pacid=37427661 locus=PGSC0003DMG400028478 ID=PGSC0003DMT400073289.v4.03 annot-version=v4.03
Sequence

ATGAAAATCTTGTTCACACTCTTCATCTTTCTTTCTCTTTTCACATTCTCAAAATCAGAA
TCCCCTTGCAAAAACAACACAGATTTAGATTTATATCTTGTTTCCAAGGCTTTCAGTTCT
GTTTATGGTTTCAACATCTCTTGGTTCAACTCAAACTGTTCTTCTCCAATAACTGAAATA
AACTTATCTTCAAGAAACCTCACTGGCATAGTTTCATGGAAGTACTTAACAAATTTGTCT
CATCTTCATACTATAGATCTATCAAATAATTCCTTAAAGGGTTCTGTTCATCCTCTGTTT
TGGTCCATTTCATCTTTGGTTCAAGTCAATTTGTCAAAGAATAAGCTAGGTGGGGCTGTT
GCTGTAGCAAGATCATCATCATCTATTCAAAGACTTGATCTTTCTTTCAACAGGTTTACC
AACTTAGGCTCTGTATTTTATGGTTTTCCTAATCTTACTTCTCTTGACCTTTCACATAAT
GATATCAAGTCTTTACCTTTTTGGTTTACCAACCTAACTAAGCTTGAAAATTTGAGCATT
TCTAGCTGTAACATTTATGGTAATCCAGAACCCCTTTCACATATCAAGTCACTGAAGCAT
TTAGATGTTTCTGTCAACCATATGGATGGTAAATTTCCTAATGATTTTCCTCCTCTGTCT
AGTCTCAATTTCTTGAATATCTCATTCAATAACTTCACTGGGGAAATACCCAAAGACCAG
TTTGCTAAATTTGGGAACTCTTCTTTCATTCATGCTGGGCACTTGCAAATCAAGAATCTC
TTACCAAATCCCAAGAATTCCTCACAGTTACACATTAAAAATCATAACTTTACTACCCCA
ACACACAAAAAAATGTTGCCTTCGAGACACAAACCTATCAAACCAAACACACACAAGAAA
AGGCCCAAATCAAGAAAGAAAGTTTTAACCATAGCTATTTCCTCTGCTTCAGCATTTCTA
ATCTTGGCCATGGGGTTAGTCATTTTGTGTCTATACAAGAGGAGAAAAACATTGGCTAGG
AAGAACAAATGGCTAATTTCAAAGCCAATACAAATACCATTTAGAATGGACAAATCAGGG
CCATTTTCATTTGAAACAGAGTCAGGGAATTCATGGGTTGCTGACATAAAAGAACCAAGT
TCAGCAGCTGTAGTTATGTTTGAGAAGCCATTGATGAACCTAACATTCAAAGACCTCATA
GCAGCCACAACTCACTTTGGAAAAGAGTCATTGTTAGCTGAAGGAAGGTGTGGGCCCGTT
TACAGAGCCGTACTTCCAGGTGACCTCCACGTGGCAATCAAGGTCTTGGAACATGCTAGG
GAACTAGCCCATGATGATGCTATTATCTTGTTTGAACAACTCTCCAGGCTTAAGCATCCT
AATCTGTTGCCTATTTCTGGTTACTGCATTGCAGGGAAAGAGAAGCTAGTCTTATACGAA
TTCATATCCAATGGTGACCTCCACCGATGGCTACACGAGCTTCCAACTGCTACCACCAAC
GTGGAAGATTGGACAACCGACACGTGGGAGTTACAAAACGGTTCTCAAATTACGTCACCC
GGGAAAATGGAATGGCACACGCGCCACCGTATTGCCGTTGGCGTAGCGCGTGGACTAGCC
TACCTCCACCACGCGCAGTCGAAACCTGTGGTCCACGGTCATTTGGTGCTATCTAATGTC
TTACTAGCCGATGACTTTGAGCCTCGGATAGCCGATTTTGGATTGAGCCAAAACCAAGCC
GAGGGATCTAGTGAGACGGATGTGTACGATTTTGGAGTCGTATTAGTAGAGCTATTAACA
GGGAAAATCGGCTCGGATGAGACGATTAAATGGGTGAGGAGGCTAGTGAAGGATGGACTT
GGAGCTGACGCGCTTGATTCGAGACTAAGACTCGGTGGTGACTCAGTGAGTGAGATGGTG
GAGTGCCTCCGAGTTGGGTACTTGTGTACGGCGGAGACCCCAAATAAACGGCCTAGAATG
CAACAAGTTTTAGGTTTGCTAAAAGACATACAGCCCCACTACCAACTCGGGAAAACGCAA
AATTTATAA