Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400073288
CDS Infomation

pacid=37428431 polypeptide=PGSC0003DMP400049572 locus=PGSC0003DMG400028477 ID=PGSC0003DMT400073288.v4.03 annot-version=v4.03
Sequence

ATGGCATCACAGAAGAAGGAATCGGAGGGAATCGCTCTACTGTCTATCTACGGCGACGAC
GAAGATGAAGACATGGAAGAACTTGAAGAAGAACAAAGGGAAGAAGATGCACAAGAATAC
AGACCTGAATCACAAAACTTAGCCATTACAATGGGCACAGAGTTCCAAGATAACAGCAAT
AAAGTTTTCGGGTCTGATTCAGGTCGGAGTTCGACTCCTTCACCCCTAATTCAACAACTT
CAGCAACAACAGTCTGTTGAAAATTTCACACCTAATAAGGTTTCGAATTTTGGTGTTGGT
TCTACCACTACGACGCCATTAGTGTCCGTTTCTTCCCCAAATCCTCAGCCAATGGAGATG
AATTTGAATGTGAATGTGAGTAGACGAGCAAGGCTTACTATTGTTGATTATGCTCATGAT
GAAGTTACCATGTCACCGGAGCCTGAGGAAGGAGAAGTAATGGCCAGTGGAAGAGTCATG
TACGGAGCGGAACTTCAAACTGTTAGTGTTGAATTTATGGAAAAGGCTTCACCAGCTCTT
CAGGTTAGAACACCTAGTACTCAAACTCCTCCTCAGTCAGCTGAACCAACTGATCAAATG
GATGATACTATGGACTTCGCTGTTAATGAAGGACATGGAGTAGCTGAAGAATCTGTTATG
GTTCCTGCAGAAGAAAAAAAAGAGTTAGATCTGTTGGAGAAATTTCTTCCTCCTCCACCA
AAGGAGAAGTGCTCAGATGAATTGCAAGAGAAGATCATGAAATTCCTTGCTCTAAAGAAG
ACTACTGGCAGAAGCTTTAATGCAGAAGTACGCAACAGAAAGGAGTATCGGAATCCAGAC
TTCTTGCTGCATTCAGTGACTTATCAAGATATTGACCAGATAGGATCTTGCTTCAGTAAA
GACGTATTCGATCCGCATGGATATGACAAAAGTGACTTCTATGATGAAATAGAGGCTGAC
TCAAAGCGTGAAATGGACAGAAGGGAGCAAGAACGGAGGAGGAGTCCAAAAGTTGACTTC
ATATCGGGAGGAACACAGCCTGCACCAATGGTTCCTACACCAAAAATCAATCTGCCGATT
CCAGGGATGGCTCCTGTTGCTGCTGGTGCATTACCGCCCACTGTAGATGTTGTAACTCGG
GATGGTAGACAGAACAAAAAGTCGAAATGGGACAAGGTGGATGGTGATCGGAGAGACCCT
GTTTCTGCTGTTGGTGCACATGCAGCACTTCTATCAGCTGCTAATGCTGGTGCTGGTTAC
ACTGCATTTGCGCAACAAAGACGCCGGGAGGCAGAGGAGAAGCGACCTAGTGACAAGAAG
TTGGATAGAAGATCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400049572
PEP Infomation

pacid=37428431 transcript=PGSC0003DMT400073288 locus=PGSC0003DMG400028477 ID=PGSC0003DMT400073288.v4.03 annot-version=v4.03
Sequence

MASQKKESEGIALLSIYGDDEDEDMEELEEEQREEDAQEYRPESQNLAITMGTEFQDNSN
KVFGSDSGRSSTPSPLIQQLQQQQSVENFTPNKVSNFGVGSTTTTPLVSVSSPNPQPMEM
NLNVNVSRRARLTIVDYAHDEVTMSPEPEEGEVMASGRVMYGAELQTVSVEFMEKASPAL
QVRTPSTQTPPQSAEPTDQMDDTMDFAVNEGHGVAEESVMVPAEEKKELDLLEKFLPPPP
KEKCSDELQEKIMKFLALKKTTGRSFNAEVRNRKEYRNPDFLLHSVTYQDIDQIGSCFSK
DVFDPHGYDKSDFYDEIEADSKREMDRREQERRRSPKVDFISGGTQPAPMVPTPKINLPI
PGMAPVAAGALPPTVDVVTRDGRQNKKSKWDKVDGDRRDPVSAVGAHAALLSAANAGAGY
TAFAQQRRREAEEKRPSDKKLDRRS*

Transcript Sequence

Transcript ID

PGSC0003DMT400073288
Transcript Infomation

pacid=37428431 locus=PGSC0003DMG400028477 ID=PGSC0003DMT400073288.v4.03 annot-version=v4.03
Sequence

ATGGCATCACAGAAGAAGGAATCGGAGGGAATCGCTCTACTGTCTATCTACGGCGACGAC
GAAGATGAAGACATGGAAGAACTTGAAGAAGAACAAAGGGAAGAAGATGCACAAGAATAC
AGACCTGAATCACAAAACTTAGCCATTACAATGGGCACAGAGTTCCAAGATAACAGCAAT
AAAGTTTTCGGGTCTGATTCAGGTCGGAGTTCGACTCCTTCACCCCTAATTCAACAACTT
CAGCAACAACAGTCTGTTGAAAATTTCACACCTAATAAGGTTTCGAATTTTGGTGTTGGT
TCTACCACTACGACGCCATTAGTGTCCGTTTCTTCCCCAAATCCTCAGCCAATGGAGATG
AATTTGAATGTGAATGTGAGTAGACGAGCAAGGCTTACTATTGTTGATTATGCTCATGAT
GAAGTTACCATGTCACCGGAGCCTGAGGAAGGAGAAGTAATGGCCAGTGGAAGAGTCATG
TACGGAGCGGAACTTCAAACTGTTAGTGTTGAATTTATGGAAAAGGCTTCACCAGCTCTT
CAGGTTAGAACACCTAGTACTCAAACTCCTCCTCAGTCAGCTGAACCAACTGATCAAATG
GATGATACTATGGACTTCGCTGTTAATGAAGGACATGGAGTAGCTGAAGAATCTGTTATG
GTTCCTGCAGAAGAAAAAAAAGAGTTAGATCTGTTGGAGAAATTTCTTCCTCCTCCACCA
AAGGAGAAGTGCTCAGATGAATTGCAAGAGAAGATCATGAAATTCCTTGCTCTAAAGAAG
ACTACTGGCAGAAGCTTTAATGCAGAAGTACGCAACAGAAAGGAGTATCGGAATCCAGAC
TTCTTGCTGCATTCAGTGACTTATCAAGATATTGACCAGATAGGATCTTGCTTCAGTAAA
GACGTATTCGATCCGCATGGATATGACAAAAGTGACTTCTATGATGAAATAGAGGCTGAC
TCAAAGCGTGAAATGGACAGAAGGGAGCAAGAACGGAGGAGGAGTCCAAAAGTTGACTTC
ATATCGGGAGGAACACAGCCTGCACCAATGGTTCCTACACCAAAAATCAATCTGCCGATT
CCAGGGATGGCTCCTGTTGCTGCTGGTGCATTACCGCCCACTGTAGATGTTGTAACTCGG
GATGGTAGACAGAACAAAAAGTCGAAATGGGACAAGGTGGATGGTGATCGGAGAGACCCT
GTTTCTGCTGTTGGTGCACATGCAGCACTTCTATCAGCTGCTAATGCTGGTGCTGGTTAC
ACTGCATTTGCGCAACAAAGACGCCGGGAGGCAGAGGAGAAGCGACCTAGTGACAAGAAG
TTGGATAGAAGATCTTGA